Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1473
(800 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81017-3|CAB54257.1| 629|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z81017-2|CAB02672.1| 578|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z81017-1|CAB02669.1| 592|Caenorhabditis elegans Hypothetical pr... 30 1.7
U80221-1|AAB38367.1| 579|Caenorhabditis elegans F58A3.1b protein. 30 1.7
U80220-1|AAB38366.1| 592|Caenorhabditis elegans F58A3.1a protein. 30 1.7
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 28 6.8
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 28 6.8
Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 28 6.8
U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical pr... 28 6.8
U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical pr... 28 6.8
U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical pr... 28 6.8
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 28 6.8
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 28 6.8
U61949-4|AAB03150.2| 414|Caenorhabditis elegans Hypothetical pr... 28 8.9
>Z81017-3|CAB54257.1| 629|Caenorhabditis elegans Hypothetical
protein F58A3.1c protein.
Length = 629
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -1
Query: 218 PNGQQIQQLQVLPISNLQGGGNNV--QPMQLVQTPDGQTFLYQPTAQAQPSIDQHQIIHQ 45
PN Q+Q L P S++ G N+ Q +Q P GQ + + +Q H +H
Sbjct: 447 PNAMQMQSLGQGPNSSMNINGRNMMNQHHPGMQPPPGQQHMPPHSMGSQMPTSMHNPMHM 506
Query: 44 PAG 36
P G
Sbjct: 507 PPG 509
>Z81017-2|CAB02672.1| 578|Caenorhabditis elegans Hypothetical
protein F58A3.1b protein.
Length = 578
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -1
Query: 218 PNGQQIQQLQVLPISNLQGGGNNV--QPMQLVQTPDGQTFLYQPTAQAQPSIDQHQIIHQ 45
PN Q+Q L P S++ G N+ Q +Q P GQ + + +Q H +H
Sbjct: 396 PNAMQMQSLGQGPNSSMNINGRNMMNQHHPGMQPPPGQQHMPPHSMGSQMPTSMHNPMHM 455
Query: 44 PAG 36
P G
Sbjct: 456 PPG 458
>Z81017-1|CAB02669.1| 592|Caenorhabditis elegans Hypothetical
protein F58A3.1a protein.
Length = 592
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -1
Query: 218 PNGQQIQQLQVLPISNLQGGGNNV--QPMQLVQTPDGQTFLYQPTAQAQPSIDQHQIIHQ 45
PN Q+Q L P S++ G N+ Q +Q P GQ + + +Q H +H
Sbjct: 410 PNAMQMQSLGQGPNSSMNINGRNMMNQHHPGMQPPPGQQHMPPHSMGSQMPTSMHNPMHM 469
Query: 44 PAG 36
P G
Sbjct: 470 PPG 472
>U80221-1|AAB38367.1| 579|Caenorhabditis elegans F58A3.1b protein.
Length = 579
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -1
Query: 218 PNGQQIQQLQVLPISNLQGGGNNV--QPMQLVQTPDGQTFLYQPTAQAQPSIDQHQIIHQ 45
PN Q+Q L P S++ G N+ Q +Q P GQ + + +Q H +H
Sbjct: 397 PNAMQMQSLGQGPNSSMNINGRNMMNQHHPGMQPPPGQQHMPPHSMGSQMPTSMHNPMHM 456
Query: 44 PAG 36
P G
Sbjct: 457 PPG 459
>U80220-1|AAB38366.1| 592|Caenorhabditis elegans F58A3.1a protein.
Length = 592
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -1
Query: 218 PNGQQIQQLQVLPISNLQGGGNNV--QPMQLVQTPDGQTFLYQPTAQAQPSIDQHQIIHQ 45
PN Q+Q L P S++ G N+ Q +Q P GQ + + +Q H +H
Sbjct: 410 PNAMQMQSLGQGPNSSMNINGRNMMNQHHPGMQPPPGQQHMPPHSMGSQMPTSMHNPMHM 469
Query: 44 PAG 36
P G
Sbjct: 470 PPG 472
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 180 DFKFARWREQCTANAVSSDT*RPDISVPTDCTGST 76
D W E C+ + S T PD SV TDC +T
Sbjct: 1530 DIALIGWSEPCSCHG-HSQTCNPDTSVCTDCEHNT 1563
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -1
Query: 185 LPISNLQGGGNNVQPMQLVQTPDGQTFLYQPTAQAQPSIDQ 63
+P+ N GG +QP + Q QT QP Q QP Q
Sbjct: 592 VPLQNTVGGNAYIQPQPVAQQ---QTIYQQPFQQYQPQYPQ 629
>Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical
protein K08E7.5d protein.
Length = 541
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -1
Query: 185 LPISNLQGGGNNVQPMQLVQTPDGQTFLYQPTAQAQPSIDQ 63
+P+ N GG +QP + Q QT QP Q QP Q
Sbjct: 237 VPLQNTVGGNAYIQPQPVAQQ---QTIYQQPFQQYQPQYPQ 274
>Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical
protein K08E7.5b protein.
Length = 493
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -1
Query: 185 LPISNLQGGGNNVQPMQLVQTPDGQTFLYQPTAQAQPSIDQ 63
+P+ N GG +QP + Q QT QP Q QP Q
Sbjct: 189 VPLQNTVGGNAYIQPQPVAQQ---QTIYQQPFQQYQPQYPQ 226
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical protein
K08E7.5a protein.
Length = 1221
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -1
Query: 185 LPISNLQGGGNNVQPMQLVQTPDGQTFLYQPTAQAQPSIDQ 63
+P+ N GG +QP + Q QT QP Q QP Q
Sbjct: 917 VPLQNTVGGNAYIQPQPVAQQ---QTIYQQPFQQYQPQYPQ 954
>U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical
protein F13B9.1c protein.
Length = 1609
Score = 28.3 bits (60), Expect = 6.8
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = -1
Query: 215 NGQQIQQLQV-LPISNLQGGGNNVQPMQLVQTPDGQTFLYQPTAQAQPSIDQHQIIHQP 42
N QQ Q Q +P ++ Q N Q Q Q QP QPS+ QI HQP
Sbjct: 68 NPQQPPQQQYNVPTNSHQTAEQNYQQQWAQQQYQNQA---QPQPPQQPSLSSQQIQHQP 123
>U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical
protein F13B9.1b protein.
Length = 1614
Score = 28.3 bits (60), Expect = 6.8
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = -1
Query: 215 NGQQIQQLQV-LPISNLQGGGNNVQPMQLVQTPDGQTFLYQPTAQAQPSIDQHQIIHQP 42
N QQ Q Q +P ++ Q N Q Q Q QP QPS+ QI HQP
Sbjct: 68 NPQQPPQQQYNVPTNSHQTAEQNYQQQWAQQQYQNQA---QPQPPQQPSLSSQQIQHQP 123
>U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical
protein F13B9.1a protein.
Length = 1632
Score = 28.3 bits (60), Expect = 6.8
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = -1
Query: 215 NGQQIQQLQV-LPISNLQGGGNNVQPMQLVQTPDGQTFLYQPTAQAQPSIDQHQIIHQP 42
N QQ Q Q +P ++ Q N Q Q Q QP QPS+ QI HQP
Sbjct: 68 NPQQPPQQQYNVPTNSHQTAEQNYQQQWAQQQYQNQA---QPQPPQQPSLSSQQIQHQP 123
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 180 DFKFARWREQCTANAVSSDT*RPDISVPTDCTGST 76
D W E C+ + S T PD SV TDC +T
Sbjct: 1530 DIALIGWSEPCSCHG-HSQTCNPDTSVCTDCEHNT 1563
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -3
Query: 180 DFKFARWREQCTANAVSSDT*RPDISVPTDCTGST 76
D W E C+ + S T PD SV TDC +T
Sbjct: 1530 DIALIGWSEPCSCHG-HSQTCNPDTSVCTDCEHNT 1563
>U61949-4|AAB03150.2| 414|Caenorhabditis elegans Hypothetical
protein F49E8.2 protein.
Length = 414
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = -1
Query: 119 DGQTFLYQPTAQAQPSIDQHQIIHQPAGETSNDRKKKKK 3
D TF ++ TA+ Q S+D +QPA + S++++ +K
Sbjct: 95 DSGTFNFRETAEEQKSVDPFSEANQPAIQMSSNQEILEK 133
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,411,737
Number of Sequences: 27780
Number of extensions: 259757
Number of successful extensions: 652
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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