Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1470
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist mic...    28   0.35 
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            26   1.4  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            26   1.4  
AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding pr...    25   1.9  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    24   4.4  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     24   5.8  

>DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist
           michelob_x protein.
          Length = 201

 Score = 27.9 bits (59), Expect = 0.35
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -2

Query: 284 PPLETRPPTNTTQRQLNEMLIXRGK-QKKHRQ 192
           PP  + PP+ TT  Q+  M+   G  Q++H+Q
Sbjct: 84  PPAASMPPSTTTNTQIPSMVSAAGSTQQQHQQ 115


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -1

Query: 504  LADDYKETSVSMWVQEHYGSGVEDPXYENVYS 409
            LAD+Y   SVS    + YG     P YE + S
Sbjct: 2145 LADNYLTESVSYLETDSYGQDSYTPIYEGLIS 2176



 Score = 24.2 bits (50), Expect = 4.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 87   WNIVTXGTLRIIFILNSPNIIFNT 158
            WN +  G     FI+ +PN + NT
Sbjct: 2834 WNALLGGIATSAFIVTNPNQLINT 2857


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -1

Query: 504  LADDYKETSVSMWVQEHYGSGVEDPXYENVYS 409
            LAD+Y   SVS    + YG     P YE + S
Sbjct: 2155 LADNYLTESVSYLETDSYGQDSYTPIYEGLIS 2186


>AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP5 protein.
          Length = 156

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +1

Query: 331 APSRRCWWW 357
           A SR CWWW
Sbjct: 2   AASRSCWWW 10


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -1

Query: 675 HSTYITEKKLVDSNSNPPKEFXKDLQRVMRKKW 577
           H+     +KLVD  S PP     D++ + +  W
Sbjct: 504 HTMASLREKLVDGGSTPPHCRPSDIEEIRQFFW 536


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = +3

Query: 492 NHPQVDIHGNQVPRAELLPVRVYTFVRLAIFSASPSADLLXIP 620
           N  Q+D  G Q      LP  +YT+   + F   P  ++   P
Sbjct: 373 NLSQLDATGGQSASTSGLPRGIYTYHNASAFQQMPKEEIKNEP 415


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 591,277
Number of Sequences: 2352
Number of extensions: 11264
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)