Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1465
         (450 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U37219-1|AAC50376.1|  520|Homo sapiens cyclophilin-like protein ...    31   1.8  
CR456548-1|CAG30434.1|  520|Homo sapiens PPIL2 protein.                31   1.8  
BC028385-1|AAH28385.1|  520|Homo sapiens PPIL2 protein protein.        31   1.8  
BC000022-1|AAH00022.1|  527|Homo sapiens peptidylprolyl isomeras...    31   1.8  
U71363-1|AAB16809.1|  431|Homo sapiens zinc finger protein zfp6 ...    29   9.7  

>U37219-1|AAC50376.1|  520|Homo sapiens cyclophilin-like protein
           CyP-60 protein.
          Length = 520

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 18/61 (29%), Positives = 26/61 (42%)
 Frame = -1

Query: 435 DGQHLTCVKXSSFYXLKXXQYPNRRPMGFPFDQPSNSATSLQDFILPNMGLQDITIQLQN 256
           D  ++TC + + FY  K    P       PFD   + + SLQ F+ P      I   L N
Sbjct: 9   DKMYITCAEYTHFYGGKKPDLPQTNFRRLPFD---HCSLSLQPFVYPVCTPDGIVFDLLN 65

Query: 255 V 253
           +
Sbjct: 66  I 66


>CR456548-1|CAG30434.1|  520|Homo sapiens PPIL2 protein.
          Length = 520

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 18/61 (29%), Positives = 26/61 (42%)
 Frame = -1

Query: 435 DGQHLTCVKXSSFYXLKXXQYPNRRPMGFPFDQPSNSATSLQDFILPNMGLQDITIQLQN 256
           D  ++TC + + FY  K    P       PFD   + + SLQ F+ P      I   L N
Sbjct: 9   DKMYITCAEYTHFYGGKKPDLPQTNFRRLPFD---HCSLSLQPFVYPVCTPDGIVFDLLN 65

Query: 255 V 253
           +
Sbjct: 66  I 66


>BC028385-1|AAH28385.1|  520|Homo sapiens PPIL2 protein protein.
          Length = 520

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 18/61 (29%), Positives = 26/61 (42%)
 Frame = -1

Query: 435 DGQHLTCVKXSSFYXLKXXQYPNRRPMGFPFDQPSNSATSLQDFILPNMGLQDITIQLQN 256
           D  ++TC + + FY  K    P       PFD   + + SLQ F+ P      I   L N
Sbjct: 9   DKMYITCAEYTHFYGGKKPDLPQTNFRRLPFD---HCSLSLQPFVYPVCTPDGIVFDLLN 65

Query: 255 V 253
           +
Sbjct: 66  I 66


>BC000022-1|AAH00022.1|  527|Homo sapiens peptidylprolyl isomerase
           (cyclophilin)-like 2 protein.
          Length = 527

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 18/61 (29%), Positives = 26/61 (42%)
 Frame = -1

Query: 435 DGQHLTCVKXSSFYXLKXXQYPNRRPMGFPFDQPSNSATSLQDFILPNMGLQDITIQLQN 256
           D  ++TC + + FY  K    P       PFD   + + SLQ F+ P      I   L N
Sbjct: 9   DKMYITCAEYTHFYGGKKPDLPQTNFRRLPFD---HCSLSLQPFVYPVCTPDGIVFDLLN 65

Query: 255 V 253
           +
Sbjct: 66  I 66


>U71363-1|AAB16809.1|  431|Homo sapiens zinc finger protein zfp6
           protein.
          Length = 431

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
 Frame = -3

Query: 310 GLHFTKHGLAGHHYS----IAKRHRT*PTEPSHVCLKCRKIKMKYAS 182
           G H++ HG +  H+S    +++  R  P E  +VC +C K   KY S
Sbjct: 160 GAHYS-HGDSMKHFSTKHILSQHQRLLPREECYVCCECGKSFSKYVS 205


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,651,420
Number of Sequences: 237096
Number of extensions: 1074575
Number of successful extensions: 2557
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2557
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)