Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1465
         (450 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    49   2e-08
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    25   0.29 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   1.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   1.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.0  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   2.7  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   2.7  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   4.7  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 49.2 bits (112), Expect = 2e-08
 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
 Frame = -1

Query: 417 CVKXSSFYXLKXXQYPNRRPMGFPFD-QPSNSATSLQDFILPNMGLQDITIQLQNVTEPN 241
           C   SS+  L+  +YP+ R MG+PFD QP     +L  F+  NM + ++T++  +   P 
Sbjct: 621 CKDASSYCGLRDRKYPDARAMGYPFDRQPRAGVETLAQFLTGNMAVTEVTVRFSDTIVPR 680

Query: 240 PRNPPMS 220
            R+  +S
Sbjct: 681 SRSGSIS 687


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 25.4 bits (53), Expect = 0.29
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -1

Query: 363  RPMGFPFDQPSNSATSLQDFILPNMGLQDITI 268
            +P+GFP D+P     SL    +PN+ ++D+ +
Sbjct: 971  KPLGFPLDRP----LSLGALSVPNIFVKDVLV 998


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = -1

Query: 363 RPMGFPFDQPSNSATSLQDFILPNMGLQDITIQLQNVTEPN 241
           R MGFP D+P +        +L N+ ++++ +  + + E N
Sbjct: 644 RAMGFPLDKPVDPLL----LVLSNIHVKEVLVHHREMEELN 680


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = -1

Query: 363 RPMGFPFDQPSNSATSLQDFILPNMGLQDITIQLQNVTEPN 241
           R MGFP D+P +        +L N+ ++++ +  + + E N
Sbjct: 644 RAMGFPLDKPVDPLL----LVLSNIHVKEVLVHHREMEELN 680


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 296  GKMKSWRLVALFEG*SNGNPIGRLLGYW 379
            G+ +S  ++ L    SN    GRLLG+W
Sbjct: 1201 GESESETVLTLAWSESNVESKGRLLGFW 1228


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = -1

Query: 369 NRRPMGFPFDQPSNSATSLQDFIL--PNMGLQDITI 268
           ++R  GFP D+P      L DF    PNM  +DI I
Sbjct: 643 DKRSFGFPLDKP------LYDFNYEGPNMLFKDILI 672


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = -1

Query: 369 NRRPMGFPFDQPSNSATSLQDFIL--PNMGLQDITI 268
           ++R  GFP D+P      L DF    PNM  +DI I
Sbjct: 643 DKRSFGFPLDKP------LYDFNYEGPNMLFKDILI 672


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = -3

Query: 346 VRSTLKQRHQPPGLHFTKHGLAGHHYSIA 260
           V+   +Q   P      + G+ GHHY  A
Sbjct: 41  VQQQSQQAGDPCDPSLLRQGVPGHHYGAA 69


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,710
Number of Sequences: 438
Number of extensions: 2072
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)