Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1461
         (800 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X63423-1|CAA45017.1|  168|Homo sapiens H(+)-transporting ATP syn...   108   2e-23
X63422-1|CAA45016.1|  168|Homo sapiens H(+)-transporting ATP syn...   108   2e-23
S87918-1|ABB76284.1|  168|Homo sapiens mitochondrial ATP synthas...   108   2e-23
S87916-1|AAA08055.1|  168|Homo sapiens mitochondrial ATP synthas...   108   2e-23
CR542218-1|CAG47014.1|  168|Homo sapiens ATP5D protein.               108   2e-23
BC018079-1|AAH18079.1|  168|Homo sapiens ATP synthase, H+ transp...   108   2e-23
BC004426-1|AAH04426.1|  168|Homo sapiens ATP synthase, H+ transp...   108   2e-23
BC002389-1|AAH02389.1|  168|Homo sapiens ATP synthase, H+ transp...   108   2e-23
AC004221-3|AAC04304.1|  168|Homo sapiens ATPD_HUMAN protein.          108   2e-23

>X63423-1|CAA45017.1|  168|Homo sapiens H(+)-transporting ATP
           synthase protein.
          Length = 168

 Score =  108 bits (260), Expect = 2e-23
 Identities = 55/111 (49%), Positives = 73/111 (65%)
 Frame = -3

Query: 546 ADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGXLPKHVPTLAVFRPGVVTIXE 367
           A A   ++M+ TFA+  +VF++   V+Q+DVP+ +GAFG L  HVPTL V RPG+V +  
Sbjct: 30  AAASGPNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHA 89

Query: 366 NDGKQNKXFVSXGXITVNDDSSVQVLAEXAXPXXSIDRSAAQEALSKAQSE 214
            DG  +K FVS G I VN DSSVQ+LAE A     +D  AA+  L KAQ+E
Sbjct: 90  EDGTTSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAE 140


>X63422-1|CAA45016.1|  168|Homo sapiens H(+)-transporting ATP
           synthase protein.
          Length = 168

 Score =  108 bits (260), Expect = 2e-23
 Identities = 55/111 (49%), Positives = 73/111 (65%)
 Frame = -3

Query: 546 ADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGXLPKHVPTLAVFRPGVVTIXE 367
           A A   ++M+ TFA+  +VF++   V+Q+DVP+ +GAFG L  HVPTL V RPG+V +  
Sbjct: 30  AAASGPNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHA 89

Query: 366 NDGKQNKXFVSXGXITVNDDSSVQVLAEXAXPXXSIDRSAAQEALSKAQSE 214
            DG  +K FVS G I VN DSSVQ+LAE A     +D  AA+  L KAQ+E
Sbjct: 90  EDGTTSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAE 140


>S87918-1|ABB76284.1|  168|Homo sapiens mitochondrial ATP synthase
           complex delta-subunit precusor protein.
          Length = 168

 Score =  108 bits (260), Expect = 2e-23
 Identities = 55/111 (49%), Positives = 73/111 (65%)
 Frame = -3

Query: 546 ADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGXLPKHVPTLAVFRPGVVTIXE 367
           A A   ++M+ TFA+  +VF++   V+Q+DVP+ +GAFG L  HVPTL V RPG+V +  
Sbjct: 30  AAASGPNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHA 89

Query: 366 NDGKQNKXFVSXGXITVNDDSSVQVLAEXAXPXXSIDRSAAQEALSKAQSE 214
            DG  +K FVS G I VN DSSVQ+LAE A     +D  AA+  L KAQ+E
Sbjct: 90  EDGTTSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAE 140


>S87916-1|AAA08055.1|  168|Homo sapiens mitochondrial ATP synthase
           complex delta-subunit precusor protein.
          Length = 168

 Score =  108 bits (260), Expect = 2e-23
 Identities = 55/111 (49%), Positives = 73/111 (65%)
 Frame = -3

Query: 546 ADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGXLPKHVPTLAVFRPGVVTIXE 367
           A A   ++M+ TFA+  +VF++   V+Q+DVP+ +GAFG L  HVPTL V RPG+V +  
Sbjct: 30  AAASGPNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHA 89

Query: 366 NDGKQNKXFVSXGXITVNDDSSVQVLAEXAXPXXSIDRSAAQEALSKAQSE 214
            DG  +K FVS G I VN DSSVQ+LAE A     +D  AA+  L KAQ+E
Sbjct: 90  EDGTTSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAE 140


>CR542218-1|CAG47014.1|  168|Homo sapiens ATP5D protein.
          Length = 168

 Score =  108 bits (260), Expect = 2e-23
 Identities = 55/111 (49%), Positives = 73/111 (65%)
 Frame = -3

Query: 546 ADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGXLPKHVPTLAVFRPGVVTIXE 367
           A A   ++M+ TFA+  +VF++   V+Q+DVP+ +GAFG L  HVPTL V RPG+V +  
Sbjct: 30  AAASGPNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHA 89

Query: 366 NDGKQNKXFVSXGXITVNDDSSVQVLAEXAXPXXSIDRSAAQEALSKAQSE 214
            DG  +K FVS G I VN DSSVQ+LAE A     +D  AA+  L KAQ+E
Sbjct: 90  EDGTTSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAE 140


>BC018079-1|AAH18079.1|  168|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, delta subunit
           protein.
          Length = 168

 Score =  108 bits (260), Expect = 2e-23
 Identities = 55/111 (49%), Positives = 73/111 (65%)
 Frame = -3

Query: 546 ADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGXLPKHVPTLAVFRPGVVTIXE 367
           A A   ++M+ TFA+  +VF++   V+Q+DVP+ +GAFG L  HVPTL V RPG+V +  
Sbjct: 30  AAASGPNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHA 89

Query: 366 NDGKQNKXFVSXGXITVNDDSSVQVLAEXAXPXXSIDRSAAQEALSKAQSE 214
            DG  +K FVS G I VN DSSVQ+LAE A     +D  AA+  L KAQ+E
Sbjct: 90  EDGTTSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAE 140


>BC004426-1|AAH04426.1|  168|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, delta subunit
           protein.
          Length = 168

 Score =  108 bits (260), Expect = 2e-23
 Identities = 55/111 (49%), Positives = 73/111 (65%)
 Frame = -3

Query: 546 ADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGXLPKHVPTLAVFRPGVVTIXE 367
           A A   ++M+ TFA+  +VF++   V+Q+DVP+ +GAFG L  HVPTL V RPG+V +  
Sbjct: 30  AAASGPNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHA 89

Query: 366 NDGKQNKXFVSXGXITVNDDSSVQVLAEXAXPXXSIDRSAAQEALSKAQSE 214
            DG  +K FVS G I VN DSSVQ+LAE A     +D  AA+  L KAQ+E
Sbjct: 90  EDGTTSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAE 140


>BC002389-1|AAH02389.1|  168|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, delta subunit
           protein.
          Length = 168

 Score =  108 bits (260), Expect = 2e-23
 Identities = 55/111 (49%), Positives = 73/111 (65%)
 Frame = -3

Query: 546 ADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGXLPKHVPTLAVFRPGVVTIXE 367
           A A   ++M+ TFA+  +VF++   V+Q+DVP+ +GAFG L  HVPTL V RPG+V +  
Sbjct: 30  AAASGPNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHA 89

Query: 366 NDGKQNKXFVSXGXITVNDDSSVQVLAEXAXPXXSIDRSAAQEALSKAQSE 214
            DG  +K FVS G I VN DSSVQ+LAE A     +D  AA+  L KAQ+E
Sbjct: 90  EDGTTSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAE 140


>AC004221-3|AAC04304.1|  168|Homo sapiens ATPD_HUMAN protein.
          Length = 168

 Score =  108 bits (260), Expect = 2e-23
 Identities = 55/111 (49%), Positives = 73/111 (65%)
 Frame = -3

Query: 546 ADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGXLPKHVPTLAVFRPGVVTIXE 367
           A A   ++M+ TFA+  +VF++   V+Q+DVP+ +GAFG L  HVPTL V RPG+V +  
Sbjct: 30  AAASGPNQMSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHA 89

Query: 366 NDGKQNKXFVSXGXITVNDDSSVQVLAEXAXPXXSIDRSAAQEALSKAQSE 214
            DG  +K FVS G I VN DSSVQ+LAE A     +D  AA+  L KAQ+E
Sbjct: 90  EDGTTSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAE 140


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,076,505
Number of Sequences: 237096
Number of extensions: 1432851
Number of successful extensions: 1595
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1595
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)