Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1461
         (800 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071203-1|AAL48825.1|  157|Drosophila melanogaster RE24457p pro...   144   2e-34
AE014298-1419|AAF46561.1|  157|Drosophila melanogaster CG2968-PA...   144   2e-34
X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like p...    33   0.34 

>AY071203-1|AAL48825.1|  157|Drosophila melanogaster RE24457p
           protein.
          Length = 157

 Score =  144 bits (348), Expect = 2e-34
 Identities = 75/123 (60%), Positives = 89/123 (72%)
 Frame = -3

Query: 573 ARRLQVRNYADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGXLPKHVPTLAVF 394
           AR  Q R+Y+D     EM LTFAA NK FYD  VV+QIDVPSFSG+FG L KHVPTLAV 
Sbjct: 15  ARLAQNRSYSD-----EMKLTFAAANKTFYDAAVVRQIDVPSFSGSFGILAKHVPTLAVL 69

Query: 393 RPGVVTIXENDGKQNKXFVSXGXITVNDDSSVQVLAEXAXPXXSIDRSAAQEALSKAQSE 214
           +PGVV + ENDGK  K FVS G +TVN+DSSVQVLAE A     ID + A++ L+K QS+
Sbjct: 70  KPGVVQVVENDGKTLKFFVSSGSVTVNEDSSVQVLAEEAHNIEDIDANEARQLLAKYQSQ 129

Query: 213 FNS 205
            +S
Sbjct: 130 LSS 132


>AE014298-1419|AAF46561.1|  157|Drosophila melanogaster CG2968-PA
           protein.
          Length = 157

 Score =  144 bits (348), Expect = 2e-34
 Identities = 75/123 (60%), Positives = 89/123 (72%)
 Frame = -3

Query: 573 ARRLQVRNYADAPKGDEMALTFAAGNKVFYDKQVVKQIDVPSFSGAFGXLPKHVPTLAVF 394
           AR  Q R+Y+D     EM LTFAA NK FYD  VV+QIDVPSFSG+FG L KHVPTLAV 
Sbjct: 15  ARLAQNRSYSD-----EMKLTFAAANKTFYDAAVVRQIDVPSFSGSFGILAKHVPTLAVL 69

Query: 393 RPGVVTIXENDGKQNKXFVSXGXITVNDDSSVQVLAEXAXPXXSIDRSAAQEALSKAQSE 214
           +PGVV + ENDGK  K FVS G +TVN+DSSVQVLAE A     ID + A++ L+K QS+
Sbjct: 70  KPGVVQVVENDGKTLKFFVSSGSVTVNEDSSVQVLAEEAHNIEDIDANEARQLLAKYQSQ 129

Query: 213 FNS 205
            +S
Sbjct: 130 LSS 132


>X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like
           protein protein.
          Length = 110

 Score = 33.5 bits (73), Expect = 0.34
 Identities = 14/17 (82%), Positives = 14/17 (82%)
 Frame = -3

Query: 711 ELVDPPGCRNSARGNCR 661
           ELVDPPGCRNSAR   R
Sbjct: 11  ELVDPPGCRNSARDRQR 27


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,672,681
Number of Sequences: 53049
Number of extensions: 462505
Number of successful extensions: 598
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)