Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1457
         (800 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094806-1|AAM11159.1|  325|Drosophila melanogaster LD27256p pro...    91   2e-18
AE013599-746|AAF59020.1|  325|Drosophila melanogaster CG8237-PA ...    91   2e-18

>AY094806-1|AAM11159.1|  325|Drosophila melanogaster LD27256p
           protein.
          Length = 325

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 53/142 (37%), Positives = 84/142 (59%), Gaps = 11/142 (7%)
 Frame = -3

Query: 645 FSEYYDDYKSAIEFTSGILFLEIVYRLLVCLFEAICLCGNVGQIGGATPGKALLGLRVVT 466
           FS ++D     I  ++ +L +E++ + +VC +EA+          GATPGK+L+ +R+  
Sbjct: 172 FSNFFDTSLDFISMSTDLLLIEMLTKFIVCCYEALWTY----LYQGATPGKSLMKIRIYY 227

Query: 465 ASAILPVEGRPKETVVLYPGRP----LGFPL---ALLRS----LLKNFLISLLFPLCVVM 319
             A++P++G P    VL P R     L +P    +L+RS    L+KN  ++LLFP+CV+M
Sbjct: 228 VEAVMPLQGPPLPQFVLQPQREPMRALLYPPQTPSLMRSFARALIKNLGMTLLFPICVLM 287

Query: 318 FVFKHNRTGYDIVCGVIVVEEN 253
             FK+NRT YD++   IVVE N
Sbjct: 288 VFFKNNRTAYDVLTKTIVVESN 309


>AE013599-746|AAF59020.1|  325|Drosophila melanogaster CG8237-PA
           protein.
          Length = 325

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 53/142 (37%), Positives = 84/142 (59%), Gaps = 11/142 (7%)
 Frame = -3

Query: 645 FSEYYDDYKSAIEFTSGILFLEIVYRLLVCLFEAICLCGNVGQIGGATPGKALLGLRVVT 466
           FS ++D     I  ++ +L +E++ + +VC +EA+          GATPGK+L+ +R+  
Sbjct: 172 FSNFFDTSLDFISMSTDLLLIEMLTKFIVCCYEALWTY----LYQGATPGKSLMKIRIYY 227

Query: 465 ASAILPVEGRPKETVVLYPGRP----LGFPL---ALLRS----LLKNFLISLLFPLCVVM 319
             A++P++G P    VL P R     L +P    +L+RS    L+KN  ++LLFP+CV+M
Sbjct: 228 VEAVMPLQGPPLPQFVLQPQREPMRALLYPPQTPSLMRSFARALIKNLGMTLLFPICVLM 287

Query: 318 FVFKHNRTGYDIVCGVIVVEEN 253
             FK+NRT YD++   IVVE N
Sbjct: 288 VFFKNNRTAYDVLTKTIVVESN 309


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,382,654
Number of Sequences: 53049
Number of extensions: 627815
Number of successful extensions: 1718
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1714
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)