Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1456
         (800 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U95000-1|AAF88143.1| 2798|Homo sapiens hyd protein protein.            31   4.8  
AF006010-1|AAD01259.2| 2799|Homo sapiens progestin induced prote...    31   4.8  
AB020703-1|BAA74919.3| 2820|Homo sapiens KIAA0896 protein protein.     31   4.8  
BC005029-1|AAH05029.1|  527|Homo sapiens LEPREL1 protein protein.      30   8.5  
AK001580-1|BAA91769.1|  527|Homo sapiens protein ( Homo sapiens ...    30   8.5  
AJ430351-1|CAD23039.2|  708|Homo sapiens leprecan-like 1 protein...    30   8.5  

>U95000-1|AAF88143.1| 2798|Homo sapiens hyd protein protein.
          Length = 2798

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -1

Query: 224  GSIQTIPRGVLLPKSPNEKFEYVRTF 147
            G ++ IP GV +P +P   +EYVR +
Sbjct: 2612 GQVELIPNGVNIPVTPQNVYEYVRKY 2637


>AF006010-1|AAD01259.2| 2799|Homo sapiens progestin induced protein
            protein.
          Length = 2799

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -1

Query: 224  GSIQTIPRGVLLPKSPNEKFEYVRTF 147
            G ++ IP GV +P +P   +EYVR +
Sbjct: 2613 GQVELIPNGVNIPVTPQNVYEYVRKY 2638


>AB020703-1|BAA74919.3| 2820|Homo sapiens KIAA0896 protein protein.
          Length = 2820

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -1

Query: 224  GSIQTIPRGVLLPKSPNEKFEYVRTF 147
            G ++ IP GV +P +P   +EYVR +
Sbjct: 2634 GQVELIPNGVNIPVTPQNVYEYVRKY 2659


>BC005029-1|AAH05029.1|  527|Homo sapiens LEPREL1 protein protein.
          Length = 527

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -1

Query: 203 RGVLLPKSPNEKFEYVRTF*SVKS--IQRIKLKRALKFFDLN 84
           RG   P +PNEKFE      ++KS    R+ LK A  F+D++
Sbjct: 313 RGKTSPHTPNEKFEGATVLKALKSGYEGRVPLKSARLFYDIS 354


>AK001580-1|BAA91769.1|  527|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10718 fis, clone NT2RP3001096, weakly similar to
           Rattus norvegicus leprecan mRNA. ).
          Length = 527

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -1

Query: 203 RGVLLPKSPNEKFEYVRTF*SVKS--IQRIKLKRALKFFDLN 84
           RG   P +PNEKFE      ++KS    R+ LK A  F+D++
Sbjct: 313 RGKTSPHTPNEKFEGATVLKALKSGYEGRVPLKSARLFYDIS 354


>AJ430351-1|CAD23039.2|  708|Homo sapiens leprecan-like 1 protein
           protein.
          Length = 708

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -1

Query: 203 RGVLLPKSPNEKFEYVRTF*SVKS--IQRIKLKRALKFFDLN 84
           RG   P +PNEKFE      ++KS    R+ LK A  F+D++
Sbjct: 494 RGKTSPHTPNEKFEGATVLKALKSGYEGRVPLKSARLFYDIS 535


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,135,522
Number of Sequences: 237096
Number of extensions: 1693343
Number of successful extensions: 2740
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2740
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)