Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1452
(700 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50479-1|AAA93478.1| 151|Anopheles gambiae protein ( Anopheles ... 281 2e-77
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 25 2.3
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 25 2.3
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 25 2.3
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 25 2.3
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 25 2.3
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 25 2.3
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge... 24 4.0
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 24 4.0
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 23 7.0
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 23 7.0
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 23 9.2
DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 pro... 23 9.2
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 23 9.2
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 23 9.2
>U50479-1|AAA93478.1| 151|Anopheles gambiae protein ( Anopheles
gambiae putativeribosomal protein S13 mRNA, complete
cds. ).
Length = 151
Score = 281 bits (688), Expect = 2e-77
Identities = 130/151 (86%), Positives = 145/151 (96%)
Frame = -2
Query: 501 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 322
MGRMHAPGKGIS+SALPYRRSVP+WLKL+A+DVKEQI KLGKKG+TPSQIG++LRDSHGV
Sbjct: 1 MGRMHAPGKGISKSALPYRRSVPSWLKLSAEDVKEQIKKLGKKGMTPSQIGIILRDSHGV 60
Query: 321 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 142
AQVRFV G K+LRIMKA+GL PD+PEDLY+LIKKAV++RKHLERNRKD DSKFRLIL+ES
Sbjct: 61 AQVRFVNGNKVLRIMKAVGLKPDIPEDLYFLIKKAVSIRKHLERNRKDIDSKFRLILIES 120
Query: 141 RIHRLARYYKTKSVLPPNWKYESSTASALVA 49
RIHRLARYYK K+VLPPNWKYESSTASALVA
Sbjct: 121 RIHRLARYYKIKAVLPPNWKYESSTASALVA 151
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.0 bits (52), Expect = 2.3
Identities = 10/38 (26%), Positives = 15/38 (39%)
Frame = -1
Query: 397 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 284
T W + + + T + TWS P+ W PP
Sbjct: 142 TTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPP 179
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.0 bits (52), Expect = 2.3
Identities = 10/38 (26%), Positives = 15/38 (39%)
Frame = -1
Query: 397 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 284
T W + + + T + TWS P+ W PP
Sbjct: 142 TTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPP 179
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.0 bits (52), Expect = 2.3
Identities = 10/38 (26%), Positives = 15/38 (39%)
Frame = -1
Query: 397 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 284
T W + + + T + TWS P+ W PP
Sbjct: 142 TTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPP 179
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 25.0 bits (52), Expect = 2.3
Identities = 10/38 (26%), Positives = 15/38 (39%)
Frame = -1
Query: 397 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 284
T W + + + T + TWS P+ W PP
Sbjct: 141 TTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 178
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 25.0 bits (52), Expect = 2.3
Identities = 10/38 (26%), Positives = 15/38 (39%)
Frame = -1
Query: 397 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 284
T W + + + T + TWS P+ W PP
Sbjct: 141 TTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 178
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 25.0 bits (52), Expect = 2.3
Identities = 10/38 (26%), Positives = 15/38 (39%)
Frame = -1
Query: 397 TNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPP 284
T W + + + T + TWS P+ W PP
Sbjct: 142 TTPSQWTDPTITTTTPVWTDPTTWSAPTTTTTWSDQPP 179
>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
dehydrogenase protein.
Length = 1325
Score = 24.2 bits (50), Expect = 4.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 616 G*FRAWRNHGHSLFSXVKLLSAHNFH 693
G FRA+ N GHS+ +L FH
Sbjct: 850 GDFRAYNNAGHSMDLSFAVLERSMFH 875
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 24.2 bits (50), Expect = 4.0
Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Frame = +1
Query: 628 AW--RNHGHSLFSXVKLLSAHNF 690
AW RNHG F ++LS H F
Sbjct: 918 AWQLRNHGEVTFHLSQVLSGHGF 940
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 23.4 bits (48), Expect = 7.0
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = -2
Query: 327 GVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKK 220
G++ V+F+T ++ I +MG+ L D Y+ ++
Sbjct: 443 GMSTVKFITYQEASEISGSMGVGWSLQVDCVYIDRR 478
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 23.4 bits (48), Expect = 7.0
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = -2
Query: 327 GVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKK 220
G++ V+F+T ++ I +MG+ L D Y+ ++
Sbjct: 444 GMSTVKFITYQEASEISGSMGVGWSLQVDCVYIDRR 479
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 23.0 bits (47), Expect = 9.2
Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 2/23 (8%)
Frame = +1
Query: 628 AW--RNHGHSLFSXVKLLSAHNF 690
AW R HG F ++LS H F
Sbjct: 970 AWQGRRHGEMTFHLAQVLSGHGF 992
>DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2
protein.
Length = 961
Score = 23.0 bits (47), Expect = 9.2
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 232 PDQESCCNEETLG 194
P QES CNEE +G
Sbjct: 946 PMQESPCNEEKIG 958
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
cytoskeletal structural protein protein.
Length = 1645
Score = 23.0 bits (47), Expect = 9.2
Identities = 12/49 (24%), Positives = 21/49 (42%)
Frame = -1
Query: 448 PPQCPYLVEIDCRRCKGTNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRN 302
PP P ++ID C +L+ ++ ++T + WS S N
Sbjct: 590 PPDVPNRIDIDVTGCSAVSLRLYEPLEGAITTKFKVQ---WSSRSDFSN 635
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 23.0 bits (47), Expect = 9.2
Identities = 9/55 (16%), Positives = 29/55 (52%)
Frame = -2
Query: 492 MHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSH 328
++ GK ++ + + + + A +++ +YK G+ G+T + + ++ +S+
Sbjct: 33 LNGTGKSNILDSICFVLGISNLVHVRATSLQDLVYKSGQAGITKATVTLIFDNSN 87
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,394
Number of Sequences: 2352
Number of extensions: 12927
Number of successful extensions: 49
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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