Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1448
(800 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 259 2e-69
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 259 2e-69
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 259 2e-69
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 259 2e-69
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 259 2e-69
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 259 2e-69
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 258 3e-69
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 258 3e-69
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 258 3e-69
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 252 2e-67
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 244 4e-65
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 125 4e-29
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 107 9e-24
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 104 6e-23
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 85 6e-17
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 81 7e-16
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 60 1e-09
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 60 1e-09
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 1e-05
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.73
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.73
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.73
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 29 3.9
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 29 3.9
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 29 5.1
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 29 5.1
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 259 bits (634), Expect = 2e-69
Identities = 128/165 (77%), Positives = 135/165 (81%)
Frame = -3
Query: 792 DIKXKLCYVXXDFEQXMAXXASSRFPRKVLRTSPTVRSSLSETKDSVAQRLSFQPSFLGM 613
DIK KLCYV DFEQ MA ASS K ++ + + L FQPSFLGM
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAL-FQPSFLGM 270
Query: 612 EACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 433
E+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
Query: 432 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 298
IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC
Sbjct: 331 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 375
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 259 bits (634), Expect = 2e-69
Identities = 128/165 (77%), Positives = 135/165 (81%)
Frame = -3
Query: 792 DIKXKLCYVXXDFEQXMAXXASSRFPRKVLRTSPTVRSSLSETKDSVAQRLSFQPSFLGM 613
DIK KLCYV DFEQ MA ASS K ++ + + L FQPSFLGM
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAL-FQPSFLGM 270
Query: 612 EACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 433
E+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
Query: 432 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 298
IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC
Sbjct: 331 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 375
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 259 bits (634), Expect = 2e-69
Identities = 128/165 (77%), Positives = 135/165 (81%)
Frame = -3
Query: 792 DIKXKLCYVXXDFEQXMAXXASSRFPRKVLRTSPTVRSSLSETKDSVAQRLSFQPSFLGM 613
DIK KLCYV DFEQ MA ASS K ++ + + L FQPSFLGM
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAL-FQPSFLGM 270
Query: 612 EACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 433
E+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
Query: 432 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 298
IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC
Sbjct: 331 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 375
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 259 bits (634), Expect = 2e-69
Identities = 128/165 (77%), Positives = 135/165 (81%)
Frame = -3
Query: 792 DIKXKLCYVXXDFEQXMAXXASSRFPRKVLRTSPTVRSSLSETKDSVAQRLSFQPSFLGM 613
DIK KLCYV DFEQ MA ASS K ++ + + L FQPSFLGM
Sbjct: 168 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAL-FQPSFLGM 226
Query: 612 EACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 433
E+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI
Sbjct: 227 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 286
Query: 432 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 298
IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC
Sbjct: 287 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 331
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 259 bits (634), Expect = 2e-69
Identities = 128/165 (77%), Positives = 135/165 (81%)
Frame = -3
Query: 792 DIKXKLCYVXXDFEQXMAXXASSRFPRKVLRTSPTVRSSLSETKDSVAQRLSFQPSFLGM 613
DIK KLCYV DFEQ MA ASS K ++ + + L FQPSFLGM
Sbjct: 198 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAL-FQPSFLGM 256
Query: 612 EACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 433
E+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI
Sbjct: 257 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 316
Query: 432 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 298
IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC
Sbjct: 317 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 361
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 259 bits (634), Expect = 2e-69
Identities = 128/165 (77%), Positives = 135/165 (81%)
Frame = -3
Query: 792 DIKXKLCYVXXDFEQXMAXXASSRFPRKVLRTSPTVRSSLSETKDSVAQRLSFQPSFLGM 613
DIK KLCYV DFEQ MA ASS K ++ + + L FQPSFLGM
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAL-FQPSFLGM 270
Query: 612 EACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 433
E+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
Query: 432 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 298
IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC
Sbjct: 331 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 375
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 258 bits (632), Expect = 3e-69
Identities = 127/165 (76%), Positives = 135/165 (81%)
Frame = -3
Query: 792 DIKXKLCYVXXDFEQXMAXXASSRFPRKVLRTSPTVRSSLSETKDSVAQRLSFQPSFLGM 613
DIK KLCYV DFEQ MA ASS K ++ + + + FQPSFLGM
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAM-FQPSFLGM 270
Query: 612 EACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 433
E+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
Query: 432 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 298
IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC
Sbjct: 331 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 375
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 258 bits (632), Expect = 3e-69
Identities = 127/165 (76%), Positives = 135/165 (81%)
Frame = -3
Query: 792 DIKXKLCYVXXDFEQXMAXXASSRFPRKVLRTSPTVRSSLSETKDSVAQRLSFQPSFLGM 613
DIK KLCYV DFEQ MA ASS K ++ + + + FQPSFLGM
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAM-FQPSFLGM 270
Query: 612 EACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 433
E+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
Query: 432 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 298
IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC
Sbjct: 331 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 375
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 258 bits (632), Expect = 3e-69
Identities = 127/165 (76%), Positives = 135/165 (81%)
Frame = -3
Query: 792 DIKXKLCYVXXDFEQXMAXXASSRFPRKVLRTSPTVRSSLSETKDSVAQRLSFQPSFLGM 613
DIK KLCYV DFEQ MA ASS K ++ + + + FQPSFLGM
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAM-FQPSFLGM 270
Query: 612 EACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 433
E+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 330
Query: 432 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 298
IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC
Sbjct: 331 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 375
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 252 bits (617), Expect = 2e-67
Identities = 126/165 (76%), Positives = 134/165 (81%)
Frame = -3
Query: 792 DIKXKLCYVXXDFEQXMAXXASSRFPRKVLRTSPTVRSSLSETKDSVAQRLSFQPSFLGM 613
DIK KLCYV DFEQ MA ASS K ++ + + + FQPSFLGM
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAM-FQPSFLGM 270
Query: 612 EACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 433
E+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKI
Sbjct: 271 ESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKI 329
Query: 432 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 298
IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC
Sbjct: 330 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 374
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 244 bits (598), Expect = 4e-65
Identities = 121/165 (73%), Positives = 130/165 (78%)
Frame = -3
Query: 792 DIKXKLCYVXXDFEQXMAXXASSRFPRKVLRTSPTVRSSLSETKDSVAQRLSFQPSFLGM 613
DIK KLCYV DFE +A ASS K ++ + + L FQP+F+GM
Sbjct: 211 DIKEKLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVL-FQPAFIGM 269
Query: 612 EACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI 433
E GIHETTY SIMKCDVDIRKDLYANTVLSGGT+M+PGIADRMQKEI LAPSTMKIKI
Sbjct: 270 EGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKI 329
Query: 432 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 298
IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC
Sbjct: 330 IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 374
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 125 bits (301), Expect = 4e-29
Identities = 56/117 (47%), Positives = 80/117 (68%)
Frame = -3
Query: 651 AQRLSFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 472
A + F+P +G E G+ SIMKCDVD+R+ LY+N VLSGGTT++ G DR+ E
Sbjct: 256 APEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGE 315
Query: 471 ITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 301
+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G S +H++
Sbjct: 316 MRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKR 372
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 107 bits (257), Expect = 9e-24
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
Frame = -3
Query: 564 DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIG 394
D+DIR L++N ++GG ++ G +R+ + P T+K+++ A P ERKY WIG
Sbjct: 344 DIDIRPTLFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIG 403
Query: 393 GSILASLSTFQQMWISKQEYDESGPSIVHRKC 298
GSIL SL TFQQMW+SK EYDESG SIV +KC
Sbjct: 404 GSILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 104 bits (250), Expect = 6e-23
Identities = 62/169 (36%), Positives = 88/169 (52%), Gaps = 13/169 (7%)
Frame = -3
Query: 789 IKXKLCYVXXDFEQXMAXXASSRFPRKVLRTSPTVRSSLSETKDSVAQRLSFQPSFLGME 610
+K KLCY+ D EQ + + T P R + A + FQP + +E
Sbjct: 216 MKEKLCYIAYDVEQEERLALETTVLSQQY-TLPDGRVIRLGGERFEAPEILFQPHLINVE 274
Query: 609 ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL---------- 460
G+ E + I D+D R D Y + VLSGGTTMYPG+ R++KE+ L
Sbjct: 275 KAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNT 334
Query: 459 -APSTMKIKIIAPPERKYSVWIGGSILASL--STFQQMWISKQEYDESG 322
A KI+I APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 335 DAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 85.0 bits (201), Expect = 6e-17
Identities = 34/100 (34%), Positives = 66/100 (66%)
Frame = -3
Query: 636 FQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 457
F+P G++ G+H+ + +I++C +D R+ LY N L+GG ++ PGIA+++++E++ +
Sbjct: 440 FKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVV 499
Query: 456 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 337
P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 500 PNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 81.4 bits (192), Expect = 7e-16
Identities = 57/183 (31%), Positives = 88/183 (48%), Gaps = 24/183 (13%)
Frame = -3
Query: 789 IKXKLCYVXXDFEQXMAXXASSRFPRKVLRTSPTVRSSLSET-------KDSVAQRLSFQ 631
IK K CYV D + + K LRT + S + + + + F
Sbjct: 234 IKEKFCYVCPDVMKEFVKYDTDA--AKWLRTYDGINSITKKPFNVDVGYERFLGPEIFFH 291
Query: 630 PSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA- 457
P F E I +T I +C +D+R+ LY N VLSGG+TM+ A ++Q+++ L+
Sbjct: 292 PEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRLSD 351
Query: 456 ---------------PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 322
P + +++I+ ++Y+VW GGS+LAS S F Q+ +K EY E G
Sbjct: 352 GRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERG 411
Query: 321 PSI 313
PSI
Sbjct: 412 PSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/111 (27%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Frame = -3
Query: 636 FQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 457
F PS + ++ CG+ E SI +C +R L N ++ GG++ +PG +R+++E+ ++
Sbjct: 277 FNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSML 336
Query: 456 PSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 313
P+ + + + P+ W G L L+ + WI+++++DE G S+
Sbjct: 337 PAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/111 (27%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Frame = -3
Query: 636 FQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 457
F PS + ++ CG+ E SI +C +R L N ++ GG++ +PG +R+++E+ ++
Sbjct: 277 FNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSML 336
Query: 456 PSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 313
P+ + + + P+ W G L L+ + WI+++++DE G S+
Sbjct: 337 PAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSL 383
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = -3
Query: 576 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 412
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 411 ----YSVWIGGSILASL-STFQQMWISKQEY 334
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.73
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 400 PYGVLPLWRSNDLNLHCRWGESCD 471
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.73
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 400 PYGVLPLWRSNDLNLHCRWGESCD 471
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.73
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 400 PYGVLPLWRSNDLNLHCRWGESCD 471
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 236 KPELSSRPRAAGGSDARCVXKHFLCTMEGPD 328
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 236 KPELSSRPRAAGGSDARCVXKHFLCTMEGPD 328
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 339 EYDESGPSIVHRKCX*THRASLPPAARGRLLNSG 238
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -3
Query: 420 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCX*THRASLPPAAR 259
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,566,739
Number of Sequences: 27780
Number of extensions: 341569
Number of successful extensions: 926
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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