Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1447
(800 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0116 + 19901546-19901737,19901825-19901899,19902034-199021... 134 6e-32
04_03_0889 + 20568984-20569037,20569271-20569345,20569981-205700... 91 4e-24
07_03_1427 + 26495072-26495148,26495323-26495468,26495581-264957... 90 2e-18
07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080 81 1e-15
06_01_0671 - 4899611-4899829,4900870-4901448 68 8e-12
01_03_0105 + 12604125-12604583 35 0.087
07_03_1402 + 26302443-26302575,26302851-26302980,26303128-26303893 31 1.1
03_03_0101 - 14431327-14432390,14432599-14432731 31 1.1
06_01_1135 - 9379361-9381018,9381356-9381665,9381811-9382764 31 1.4
01_01_0288 - 2373764-2373923,2374016-2374398,2375426-2375710 31 1.4
05_01_0288 + 2253005-2253137,2253269-2253398,2253504-2254524 30 2.5
01_06_0448 + 29462920-29463052,29463220-29463349,29463608-294637... 30 2.5
01_05_0267 - 20237001-20237802,20238257-20238386,20238679-20238820 30 2.5
01_02_0017 - 10215995-10217018,10217120-10217249,10217364-10217496 30 2.5
03_03_0025 + 13848450-13849420,13850921-13851131,13851327-138514... 29 3.3
07_03_1139 + 24254662-24255306 29 5.7
07_03_0575 - 19637277-19637681 28 7.5
02_02_0154 + 7263707-7263782,7263908-7264248 28 7.5
09_02_0245 - 6198271-6198437,6198496-6198559,6199011-6199259,619... 28 9.9
07_01_0629 - 4695778-4696077,4696242-4696406,4696497-4696673,469... 28 9.9
06_03_1220 - 28505306-28508497 28 9.9
01_06_0813 - 32165310-32165546,32165691-32165783,32166075-321662... 28 9.9
01_01_1145 + 9073973-9074281,9075440-9075998,9076088-9076241,907... 28 9.9
>02_04_0116 +
19901546-19901737,19901825-19901899,19902034-19902115,
19902219-19902298,19903279-19903482,19903625-19903750,
19903872-19903985,19904802-19904918
Length = 329
Score = 134 bits (325), Expect = 6e-32
Identities = 61/115 (53%), Positives = 82/115 (71%), Gaps = 1/115 (0%)
Frame = -1
Query: 503 FTHLAWINTPRKQGGLGPMNIPXISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQ 324
F+HLAW+ T RK GGLG + P ISD + IS+ +GVL + GI RGLFIID + ++
Sbjct: 212 FSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSFGVLIPDQGIALRGLFIIDKEGVIQH 271
Query: 323 ITINDLPVGRSVEETLRLVQAFQFT-DKHGEVCPANWRPGAKTIKPDTKAAQEYF 162
TIN+L +GRSV+ET+R +QA Q+ D EVCPA W+PG K++KPD K ++EYF
Sbjct: 272 STINNLAIGRSVDETMRTLQALQYVQDNPDEVCPAGWKPGDKSMKPDPKGSKEYF 326
Score = 94.7 bits (225), Expect = 8e-20
Identities = 44/68 (64%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Frame = -1
Query: 707 PQFKATAVVNXEFKDIXLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCE 531
P F A AV + EF ++ LSDY GK YV+LFFYPLDFTFVCPTEI AFS++ DEF K+ E
Sbjct: 75 PDFDAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYDEFEKLNTE 134
Query: 530 VLGASTDS 507
+LG S DS
Sbjct: 135 ILGVSIDS 142
>04_03_0889 +
20568984-20569037,20569271-20569345,20569981-20570088,
20572066-20572179,20572393-20572509
Length = 155
Score = 91.5 bits (217), Expect(2) = 4e-24
Identities = 42/80 (52%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = -1
Query: 398 GVLDEETGIPFRGLFIIDDKQNLRQITINDLPVGRSVEETLRLVQAFQFTDKH-GEVCPA 222
GV + GI RGLFIID + ++ TIN+L +GRSV+ETLR +QA Q+ ++ EVCPA
Sbjct: 73 GVSIDSVGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPA 132
Query: 221 NWRPGAKTIKPDTKAAQEYF 162
W+PG K++KPD K ++EYF
Sbjct: 133 GWKPGEKSMKPDPKDSKEYF 152
Score = 38.3 bits (85), Expect(2) = 4e-24
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = -1
Query: 599 FVCPTEIIAFSEKADEFRKIGCEVLGASTDS 507
FV EI AFS++ +EF KI EVLG S DS
Sbjct: 48 FVSSAEITAFSDRYEEFEKINTEVLGVSIDS 78
>07_03_1427 +
26495072-26495148,26495323-26495468,26495581-26495729,
26495829-26496224
Length = 255
Score = 90.2 bits (214), Expect = 2e-18
Identities = 53/165 (32%), Positives = 82/165 (49%), Gaps = 7/165 (4%)
Frame = -1
Query: 662 IXLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAW 486
I + D+ G YV+LF +P DFT VC TE+ A + A EF K G ++LG S D +H W
Sbjct: 57 IRIHDFVGDTYVILFSHPGDFTPVCTTELAAMAGYAKEFDKRGVKLLGISCDDVQSHKDW 116
Query: 485 INTPRKQGGLGPMNIPXISDKSHRISRDYGVLD----EETG--IPFRGLFIIDDKQNLRQ 324
I + P ++D S + ++D + G +P R L I+ + ++
Sbjct: 117 IKDIEAYKPGNRVTYPIMADPSREAIKQLNMVDPDEKDSNGGHLPSRALHIVGPDKKVKL 176
Query: 323 ITINDLPVGRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTIKP 189
+ VGR+++E +R V A Q KH P NW+PG + + P
Sbjct: 177 SFLYPACVGRNMDEVVRAVDALQTAAKHAVATPVNWKPGERVVIP 221
>07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080
Length = 220
Score = 80.6 bits (190), Expect = 1e-15
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 7/172 (4%)
Frame = -1
Query: 662 IXLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAW 486
I L D+ G YV++F +P DFT VC TE+ + A EF K G ++LG S D +H W
Sbjct: 22 IRLHDFVGDAYVIIFSHPADFTPVCTTELSEMAGYAGEFDKRGVKLLGFSCDDVESHKDW 81
Query: 485 INTPRKQGGLGPMNIPXISDKSHRISRDYGVLD---EETG---IPFRGLFIIDDKQNLRQ 324
I + P ++D R ++D ++T +P R L I+ + ++
Sbjct: 82 IKDIEAYKPGRRVGFPIVADPDREAIRQLNMIDADEKDTAGGELPNRALHIVGPDKKVKL 141
Query: 323 ITINDLPVGRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTIKPDTKAAQE 168
+ GR++ E LR A +H P NW+PG + + P + +E
Sbjct: 142 SFLFPACTGRNMAEVLRATDALLTAARHRVATPVNWKPGERVVIPPGVSDEE 193
>06_01_0671 - 4899611-4899829,4900870-4901448
Length = 265
Score = 68.1 bits (159), Expect = 8e-12
Identities = 44/152 (28%), Positives = 83/152 (54%), Gaps = 6/152 (3%)
Frame = -1
Query: 698 KATAVVNXEFKD-----IXLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGC 534
K +A N +D + LS +KG+ VV++FYP D T C + AF + ++F+K G
Sbjct: 120 KGSAAPNFTLRDQDGRAVSLSKFKGRPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGA 179
Query: 533 EVLGASTDSHFTHLAWINTPRKQGGLGPMNIPXISDKSHRISRDYGVLDEETG-IPFRGL 357
EV+G S D +H + +K+ L P + +SD+ +++ +++GV + G +P R
Sbjct: 180 EVIGISGDDAASHKEF----KKKYKL-PFTL--LSDEGNKVRKEWGVPADLFGTLPGRQT 232
Query: 356 FIIDDKQNLRQITINDLPVGRSVEETLRLVQA 261
+++D ++ I N + + ETL+++Q+
Sbjct: 233 YVLDKNGVVQYIYNNQFQPEKHIGETLKILQS 264
>01_03_0105 + 12604125-12604583
Length = 152
Score = 34.7 bits (76), Expect = 0.087
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -3
Query: 453 SHEHSXDKRQVAPHLSRLRSAGRGDGHPLPRTXHHRRQAEPQADHHQRPA 304
SH+H Q +P ++LR GR DG H RRQ Q + +PA
Sbjct: 62 SHQHKLFYSQPSPPRAKLRLVGRIDGRKEEAAHHSRRQPSLQKEAAAKPA 111
>07_03_1402 + 26302443-26302575,26302851-26302980,26303128-26303893
Length = 342
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2
Query: 365 GRGCPSPRPALRSRERCGATCRL 433
G GC S P L ERCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLERCGKSCRL 55
>03_03_0101 - 14431327-14432390,14432599-14432731
Length = 398
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2
Query: 365 GRGCPSPRPALRSRERCGATCRL 433
G GC S P L ERCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLERCGKSCRL 55
>06_01_1135 - 9379361-9381018,9381356-9381665,9381811-9382764
Length = 973
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 279 GLLHRPPHGQVVDGDLPEVLLVVDDEXSSEGDARLLVQHSVVARDAVRLVAYXRNVHG 452
G+L +G+VVD L + ++DD E +L +H AR +R + R+V G
Sbjct: 841 GVLESNENGRVVDAVLGALCTLMDDAVDVERGVAVLAEHD-AARHVLRALRQHRDVGG 897
>01_01_0288 - 2373764-2373923,2374016-2374398,2375426-2375710
Length = 275
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = -1
Query: 473 RKQGGLGPMNIPXISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQITI 315
+K+ G G N+P D R ++DY +DE+ +P F I D++ + + +
Sbjct: 65 KKKKGSGAGNLPGAIDAEIREAQDYLAIDEQEPVPENFPFEILDEEGMSVVIL 117
>05_01_0288 + 2253005-2253137,2253269-2253398,2253504-2254524
Length = 427
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 365 GRGCPSPRPALRSRERCGATCRL 433
G GC S P L +RCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLQRCGKSCRL 55
>01_06_0448 +
29462920-29463052,29463220-29463349,29463608-29463732,
29463923-29464458
Length = 307
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 365 GRGCPSPRPALRSRERCGATCRL 433
G GC S P L +RCG +CRL
Sbjct: 33 GHGCWSSVPRLAGLQRCGKSCRL 55
>01_05_0267 - 20237001-20237802,20238257-20238386,20238679-20238820
Length = 357
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2
Query: 365 GRGCPSPRPALRSRERCGATCRL 433
G GC S P L ERCG +CRL
Sbjct: 36 GVGCWSSVPKLAGLERCGKSCRL 58
>01_02_0017 - 10215995-10217018,10217120-10217249,10217364-10217496
Length = 428
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 365 GRGCPSPRPALRSRERCGATCRL 433
G GC S P L +RCG +CRL
Sbjct: 33 GHGCWSTVPKLAGLQRCGKSCRL 55
>03_03_0025 +
13848450-13849420,13850921-13851131,13851327-13851459,
13851576-13851832
Length = 523
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -3
Query: 252 HGQARRGVPRQLEARRQDHQARHQGRAGVLRRRQLAHA 139
H Q RR +Q + R Q ARH+ +G RRR +A A
Sbjct: 217 HYQQRRQKQKQKQEREQA-TARHRSSSGAARRRSVAEA 253
>07_03_1139 + 24254662-24255306
Length = 214
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/70 (30%), Positives = 26/70 (37%), Gaps = 9/70 (12%)
Frame = -3
Query: 486 DQHAAQAGRTRSHEHSXDKRQVAPHL---------SRLRSAGRGDGHPLPRTXHHRRQAE 334
D A +T H D PHL S L +AG P P HHR ++
Sbjct: 140 DSSALCCPKTPPPAHRPDPATAVPHLPPLGRDPSPSPLPTAGENSTSPTPEREHHRGESP 199
Query: 333 PQADHHQRPA 304
A +RPA
Sbjct: 200 ADAFLARRPA 209
>07_03_0575 - 19637277-19637681
Length = 134
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/58 (31%), Positives = 23/58 (39%)
Frame = +1
Query: 424 LSLIXGMFMGPSPPCLRGVLIQARCVKCESVEAPSTSQPILRNSSAFSENAIISVGHT 597
+ + G P C R V + K ESV A + +L N F NA VG T
Sbjct: 49 IKFLSNKLSGHEPTCKRIVAVGTGSSKSESVVAVDKVESMLCNLDRFEANAQHEVGPT 106
>02_02_0154 + 7263707-7263782,7263908-7264248
Length = 138
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +1
Query: 370 GMPVSSSSTP*SREMRCDLSLIXGMFMGPSPPCLRGVLIQARCVKCESVEAPSTS 534
G+ +S +T S + C LSL + PS CL+ A + C + AP S
Sbjct: 25 GVIATSKATSKSYKAACTLSLATCLPSLPSDKCLKAAFAAATSLLCLTAGAPPPS 79
>09_02_0245 -
6198271-6198437,6198496-6198559,6199011-6199259,
6199796-6199864,6199956-6200006,6200967-6201014,
6201175-6201255,6202793-6202831,6203045-6203128,
6204524-6204728,6205041-6205143,6205224-6205353,
6206059-6206250
Length = 493
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 429 RQVAPHLSRLRSAGRGDGHPLPRTXHHRRQAEPQAD 322
RQ AP L+ +A G+G+P P + + PQ D
Sbjct: 48 RQSAPELTAATTATEGEGNPTPTKKNIQEIPTPQFD 83
>07_01_0629 -
4695778-4696077,4696242-4696406,4696497-4696673,
4697157-4697455,4697589-4697751,4697897-4698088,
4698211-4698385,4698527-4698741,4698948-4699385
Length = 707
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 234 GVPRQLEARRQDHQARHQGRAGVLRRRQLAHAP 136
G P + EAR+ D++A GR+ V+ R+ P
Sbjct: 395 GKPPKFEARKMDYKATESGRSLVIPEREYETEP 427
>06_03_1220 - 28505306-28508497
Length = 1063
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 169 SCAALVSGLMVLAPGLQLAGHTSPCLSVNWKACTS 273
SC +VSG++VL + G + C+ V KA S
Sbjct: 2 SCHVVVSGVLVLVLAATICGCAAACVEVERKALLS 36
>01_06_0813 -
32165310-32165546,32165691-32165783,32166075-32166218,
32166685-32166771,32166858-32167077,32167879-32168039
Length = 313
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +3
Query: 243 LVRELEGLHQPQGLLHRPPHGQVVDGDLPEVLL 341
+VRE E LHQ G P DLPE LL
Sbjct: 117 MVRETEKLHQQVGRYKSPDEHPFFPEDLPEPLL 149
>01_01_1145 +
9073973-9074281,9075440-9075998,9076088-9076241,
9077475-9077565,9077722-9077793,9077879-9078390,
9078854-9078923,9079514-9079579,9080266-9080570,
9080872-9081006,9081141-9081204,9081429-9081574,
9081669-9081773,9082310-9082490
Length = 922
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 378 GHPLPRTXHHRRQAEPQADHHQR 310
G P+PR H+R + Q+ H QR
Sbjct: 651 GQPIPRRRHNRGNRKAQSSHKQR 673
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,166,044
Number of Sequences: 37544
Number of extensions: 323959
Number of successful extensions: 1208
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1202
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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