Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1445
         (800 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    25   2.1  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    25   2.1  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    25   3.6  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    24   4.8  

>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +1

Query: 199 MTESHLNANAELCAN*KCFTTEVFLKYCEWYRVFDVSSIKS-YTFNLNLTYSYEL 360
           +T+  L   + LC     F   V LK C W+   D  S K+ Y  NL ++ SY+L
Sbjct: 407 LTDDGLIMKSFLCPESTLFDQTV-LK-CNWWFYVDCKSSKNLYDSNLPVSKSYQL 459


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +1

Query: 199 MTESHLNANAELCAN*KCFTTEVFLKYCEWYRVFDVSSIKS-YTFNLNLTYSYEL 360
           +T+  L   + LC     F   V LK C W+   D  S K+ Y  NL ++ SY+L
Sbjct: 415 LTDDGLIMKSFLCPESTLFDQTV-LK-CNWWFYVDCKSSKNLYDSNLPVSKSYQL 467


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 21/78 (26%), Positives = 35/78 (44%)
 Frame = -3

Query: 714 VFTNVRLRSHTYPISFLY*LVKHFQ*YGLLSKALGVDFILIVIICVNVSPKYGSDTLINL 535
           +F  V L   T  ISFL  LV +          LG+  +L +++ + +  K    T + L
Sbjct: 233 LFYTVNLILPTVLISFLCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVL 292

Query: 534 GYCLRSLVSTFLQRTPAI 481
               + L+ TF+  T +I
Sbjct: 293 PLIAKYLLFTFIMNTVSI 310


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -1

Query: 131 STITYLLNLVLYSIYLHFLYVCLVSYLN 48
           S +T +L  VL  I + F Y+C+   LN
Sbjct: 269 SIVTSILQFVLPFIIMAFCYICVSIRLN 296



 Score = 23.4 bits (48), Expect = 8.3
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -1

Query: 737 YVSNLSVSYLLM*DFAVILTPFH 669
           Y+S L+++ + +  F VI+ PFH
Sbjct: 180 YISTLTLTSIAIDRFFVIIYPFH 202


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 722,526
Number of Sequences: 2352
Number of extensions: 14366
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)