Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1440
         (600 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC129953-1|AAI29954.1| 1219|Homo sapiens PLEKHG3 protein protein.      30   5.4  
BC129952-1|AAI29953.1|  752|Homo sapiens PLEKHG3 protein protein.      30   5.4  
BC073907-1|AAH73907.1|  760|Homo sapiens PLEKHG3 protein protein.      30   5.4  
BC011891-1|AAH11891.2|  694|Homo sapiens PLEKHG3 protein protein.      30   5.4  
AK074169-1|BAB84995.1|  804|Homo sapiens FLJ00242 protein protein.     30   5.4  
AB011171-1|BAA25525.1|  697|Homo sapiens KIAA0599 protein protein.     30   5.4  
AB058771-1|BAB47497.1|  463|Homo sapiens KIAA1868 protein protein.     30   7.1  

>BC129953-1|AAI29954.1| 1219|Homo sapiens PLEKHG3 protein protein.
          Length = 1219

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +2

Query: 269  PKIFWLSNXEVEQ*TMGMAGR--SRSPISPEQQITWPTKR 382
            P+ F+ +   V Q T    GR  +RSP+SP +  +WP  R
Sbjct: 1012 PQRFFFNPSAVSQRTTSPGGRPSARSPLSPTETFSWPDVR 1051


>BC129952-1|AAI29953.1|  752|Homo sapiens PLEKHG3 protein protein.
          Length = 752

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +2

Query: 269 PKIFWLSNXEVEQ*TMGMAGR--SRSPISPEQQITWPTKR 382
           P+ F+ +   V Q T    GR  +RSP+SP +  +WP  R
Sbjct: 545 PQRFFFNPSAVSQRTTSPGGRPSARSPLSPTETFSWPDVR 584


>BC073907-1|AAH73907.1|  760|Homo sapiens PLEKHG3 protein protein.
          Length = 760

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +2

Query: 269 PKIFWLSNXEVEQ*TMGMAGR--SRSPISPEQQITWPTKR 382
           P+ F+ +   V Q T    GR  +RSP+SP +  +WP  R
Sbjct: 553 PQRFFFNPSAVSQRTTSPGGRPSARSPLSPTETFSWPDVR 592


>BC011891-1|AAH11891.2|  694|Homo sapiens PLEKHG3 protein protein.
          Length = 694

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +2

Query: 269 PKIFWLSNXEVEQ*TMGMAGR--SRSPISPEQQITWPTKR 382
           P+ F+ +   V Q T    GR  +RSP+SP +  +WP  R
Sbjct: 487 PQRFFFNPSAVSQRTTSPGGRPSARSPLSPTETFSWPDVR 526


>AK074169-1|BAB84995.1|  804|Homo sapiens FLJ00242 protein protein.
          Length = 804

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +2

Query: 269 PKIFWLSNXEVEQ*TMGMAGR--SRSPISPEQQITWPTKR 382
           P+ F+ +   V Q T    GR  +RSP+SP +  +WP  R
Sbjct: 597 PQRFFFNPSAVSQRTTSPGGRPSARSPLSPTETFSWPDVR 636


>AB011171-1|BAA25525.1|  697|Homo sapiens KIAA0599 protein protein.
          Length = 697

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +2

Query: 269 PKIFWLSNXEVEQ*TMGMAGR--SRSPISPEQQITWPTKR 382
           P+ F+ +   V Q T    GR  +RSP+SP +  +WP  R
Sbjct: 490 PQRFFFNPSAVSQRTTSPGGRPSARSPLSPTETFSWPDVR 529


>AB058771-1|BAB47497.1|  463|Homo sapiens KIAA1868 protein protein.
          Length = 463

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 19/64 (29%), Positives = 28/64 (43%)
 Frame = +2

Query: 224 PRRTGXQRPPHLRPQPKIFWLSNXEVEQ*TMGMAGRSRSPISPEQQITWPTKRXKESILP 403
           P  TG  R P   PQ     ++  E          + R+P +PE  + W   + K S+L 
Sbjct: 376 PAPTGTPRQPREAPQDPGNGVTTRECAS---AFTCKPRAPCTPEM-LDWNPPKAKASVLA 431

Query: 404 PIFS 415
           P+FS
Sbjct: 432 PLFS 435


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,196,502
Number of Sequences: 237096
Number of extensions: 1781331
Number of successful extensions: 2864
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2864
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)