Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1440
         (600 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2901|AAF53645.3|  491|Drosophila melanogaster CG31741-P...    33   0.39 

>AE014134-2901|AAF53645.3|  491|Drosophila melanogaster CG31741-PA
           protein.
          Length = 491

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
 Frame = +1

Query: 175 PKETFKPQQGFGNXFSPAENWKXKTSTFTPPAQNLL-AFXXXXXTINNGDGWQVPLPNLT 351
           P E  K     G  +SP   W   T+ F P A   L  F     TI+  D W+    NLT
Sbjct: 252 PGECGKVNGSTGELWSPYRTWDQPTTIFLPDAARYLNLFPKENLTIDGIDVWRYESTNLT 311

Query: 352 RTTNHLA 372
                L+
Sbjct: 312 IDNGQLS 318


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,939,952
Number of Sequences: 53049
Number of extensions: 491004
Number of successful extensions: 979
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)