Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1428
         (490 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82171-1|CAI95602.1|  757|Homo sapiens activating signal cointeg...    29   8.6  
BC025368-1|AAH25368.1|  757|Homo sapiens activating signal coint...    29   8.6  
AY013289-1|AAG45475.1|  757|Homo sapiens ASC-1 complex subunit P...    29   8.6  
AK223033-1|BAD96753.1|  481|Homo sapiens activating signal coint...    29   8.6  
AK222723-1|BAD96443.1|  481|Homo sapiens activating signal coint...    29   8.6  
AK025241-1|BAB15089.1|  468|Homo sapiens protein ( Homo sapiens ...    29   8.6  

>Z82171-1|CAI95602.1|  757|Homo sapiens activating signal
           cointegrator 1 complex subunit 2 protein.
          Length = 757

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -1

Query: 244 PRGPTVTRHATHRRKKFENVKKTRTXHTART 152
           PRG   +R  T  R+K E  K TR  H  RT
Sbjct: 714 PRGHGQSRETTQERRKKEANKATRANHNRRT 744


>BC025368-1|AAH25368.1|  757|Homo sapiens activating signal
           cointegrator 1 complex subunit 2 protein.
          Length = 757

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -1

Query: 244 PRGPTVTRHATHRRKKFENVKKTRTXHTART 152
           PRG   +R  T  R+K E  K TR  H  RT
Sbjct: 714 PRGHGQSRETTQERRKKEANKATRANHNRRT 744


>AY013289-1|AAG45475.1|  757|Homo sapiens ASC-1 complex subunit P100
           protein.
          Length = 757

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -1

Query: 244 PRGPTVTRHATHRRKKFENVKKTRTXHTART 152
           PRG   +R  T  R+K E  K TR  H  RT
Sbjct: 714 PRGHGQSRETTQERRKKEANKATRANHNRRT 744


>AK223033-1|BAD96753.1|  481|Homo sapiens activating signal
           cointegrator 1 complex subunit 2 variant protein.
          Length = 481

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -1

Query: 244 PRGPTVTRHATHRRKKFENVKKTRTXHTART 152
           PRG   +R  T  R+K E  K TR  H  RT
Sbjct: 438 PRGHGQSRETTQERRKKEANKATRANHNRRT 468


>AK222723-1|BAD96443.1|  481|Homo sapiens activating signal
           cointegrator 1 complex subunit 2 variant protein.
          Length = 481

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -1

Query: 244 PRGPTVTRHATHRRKKFENVKKTRTXHTART 152
           PRG   +R  T  R+K E  K TR  H  RT
Sbjct: 438 PRGHGQSRETTQERRKKEANKATRANHNRRT 468


>AK025241-1|BAB15089.1|  468|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21588 fis, clone COL06949. ).
          Length = 468

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -1

Query: 244 PRGPTVTRHATHRRKKFENVKKTRTXHTART 152
           PRG   +R  T  R+K E  K TR  H  RT
Sbjct: 425 PRGHGQSRETTQERRKKEANKATRANHNRRT 455


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,874,085
Number of Sequences: 237096
Number of extensions: 996490
Number of successful extensions: 1458
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1457
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)