Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1428
         (490 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66499-6|CAA91299.2|  765|Caenorhabditis elegans Hypothetical pr...    27   9.7  
U23510-5|AAY55872.1|  110|Caenorhabditis elegans Hypothetical pr...    27   9.7  

>Z66499-6|CAA91299.2|  765|Caenorhabditis elegans Hypothetical
           protein T01B7.6 protein.
          Length = 765

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -1

Query: 283 WAAFDERLFTLSLPRGPTVTRHATHRRK 200
           WA +D+   T S+P  PT  ++ +H +K
Sbjct: 131 WAIYDDTRKTTSVPPTPTDIQNTSHMKK 158


>U23510-5|AAY55872.1|  110|Caenorhabditis elegans Hypothetical
           protein R12C12.10 protein.
          Length = 110

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
 Frame = -2

Query: 165 TQLAHHAQLWNGNG----NAG--LVSHXYLVLLLISQGNY 64
           T L ++ Q W GNG    +AG   V      LLLI QG+Y
Sbjct: 58  TTLGYYEQYWQGNGWKTDDAGNVYVGDDNAKLLLIQQGSY 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,663,703
Number of Sequences: 27780
Number of extensions: 153432
Number of successful extensions: 321
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 321
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)