Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1427
(400 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 21 3.9
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 21 3.9
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 21 3.9
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 21 3.9
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 6.9
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 6.9
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 21.4 bits (43), Expect = 3.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 151 SRCSYFPPARSVFSYPCLRRQSEP*TDP 234
+R Y P R +P LRR++EP +P
Sbjct: 44 NRPVYIPQPRP--PHPRLRREAEPEAEP 69
Score = 21.4 bits (43), Expect = 3.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 151 SRCSYFPPARSVFSYPCLRRQSEP*TDP 234
+R Y P R +P LRR++EP +P
Sbjct: 184 NRPVYIPQPRP--PHPRLRREAEPEAEP 209
Score = 21.4 bits (43), Expect = 3.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 151 SRCSYFPPARSVFSYPCLRRQSEP*TDP 234
+R Y P R +P LRR++EP +P
Sbjct: 212 NRPVYIPQPRP--PHPRLRREAEPEAEP 237
Score = 20.2 bits (40), Expect = 9.1
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +1
Query: 193 YPCLRRQSEP*TDP 234
+P LRR++EP +P
Sbjct: 112 HPRLRREAEPEAEP 125
Score = 20.2 bits (40), Expect = 9.1
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +1
Query: 193 YPCLRRQSEP*TDP 234
+P LRR++EP +P
Sbjct: 168 HPRLRREAEPEAEP 181
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 21.4 bits (43), Expect = 3.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 151 SRCSYFPPARSVFSYPCLRRQSEP*TDP 234
+R Y P R +P LRR++EP +P
Sbjct: 45 NRPVYIPQPRP--PHPRLRREAEPEAEP 70
Score = 21.4 bits (43), Expect = 3.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 151 SRCSYFPPARSVFSYPCLRRQSEP*TDP 234
+R Y P R +P LRR++EP +P
Sbjct: 73 NRPVYIPQPRP--PHPRLRREAEPEAEP 98
Score = 21.4 bits (43), Expect = 3.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 151 SRCSYFPPARSVFSYPCLRRQSEP*TDP 234
+R Y P R +P LRR++EP +P
Sbjct: 101 NRPVYIPQPRP--PHPRLRREAEPEAEP 126
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 21.4 bits (43), Expect = 3.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 151 SRCSYFPPARSVFSYPCLRRQSEP*TDP 234
+R Y P R +P LRR++EP +P
Sbjct: 45 NRPIYIPQPRP--PHPRLRREAEPKAEP 70
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 21.4 bits (43), Expect = 3.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 151 SRCSYFPPARSVFSYPCLRRQSEP*TDP 234
+R Y P R +P LRR++EP +P
Sbjct: 16 NRPVYIPQPRP--PHPRLRREAEPEAEP 41
Score = 21.4 bits (43), Expect = 3.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 151 SRCSYFPPARSVFSYPCLRRQSEP*TDP 234
+R Y P R +P LRR++EP +P
Sbjct: 44 NRPVYIPQPRP--PHPRLRREAEPEAEP 69
Score = 21.4 bits (43), Expect = 3.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 151 SRCSYFPPARSVFSYPCLRRQSEP*TDP 234
+R Y P R +P LRR++EP +P
Sbjct: 72 NRPVYIPQPRP--PHPRLRREAEPEAEP 97
Score = 21.4 bits (43), Expect = 3.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 151 SRCSYFPPARSVFSYPCLRRQSEP*TDP 234
+R Y P R +P LRR++EP +P
Sbjct: 100 NRPVYIPQPRP--PHPRLRREAEPEAEP 125
Score = 21.4 bits (43), Expect = 3.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 151 SRCSYFPPARSVFSYPCLRRQSEP*TDP 234
+R Y P R +P LRR++EP +P
Sbjct: 156 NRPVYIPQPRP--PHPRLRREAEPEAEP 181
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 20.6 bits (41), Expect = 6.9
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 242 AXYRAETACSLRSLCV 289
A RAET C+L SL V
Sbjct: 533 ASVRAETYCNLFSLSV 548
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 20.6 bits (41), Expect = 6.9
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 242 AXYRAETACSLRSLCV 289
A RAET C+L SL V
Sbjct: 501 ASVRAETYCNLFSLSV 516
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,978
Number of Sequences: 438
Number of extensions: 1176
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9885360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -