Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1399
         (693 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00683-1|AAC46468.1| 1354|Drosophila melanogaster formylglycinea...    30   3.4  
BT011143-1|AAR82811.1| 1373|Drosophila melanogaster GM01721p pro...    30   3.4  
AE014134-1030|AAN10574.1| 1354|Drosophila melanogaster CG9127-PC...    30   3.4  
AE014134-1029|AAN10573.1| 1354|Drosophila melanogaster CG9127-PB...    30   3.4  
AE014134-1028|AAF52329.1| 1354|Drosophila melanogaster CG9127-PA...    30   3.4  

>U00683-1|AAC46468.1| 1354|Drosophila melanogaster
           formylglycineamide ribotide amidotransferaseprotein.
          Length = 1354

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 14/52 (26%), Positives = 29/52 (55%)
 Frame = -3

Query: 511 MGHSPYIARPIKRSSRTVMKLSLNNRLYIPFIIKKLKSILFMGIQRYLKNKI 356
           +G  P     +KR    + +LSL   L +   ++++ S++ +G +R+L NK+
Sbjct: 641 LGDMPKRTYDLKREQTPLKELSLPKGLLLDEALERVLSLVAVGSKRFLTNKV 692


>BT011143-1|AAR82811.1| 1373|Drosophila melanogaster GM01721p
           protein.
          Length = 1373

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 14/52 (26%), Positives = 29/52 (55%)
 Frame = -3

Query: 511 MGHSPYIARPIKRSSRTVMKLSLNNRLYIPFIIKKLKSILFMGIQRYLKNKI 356
           +G  P     +KR    + +LSL   L +   ++++ S++ +G +R+L NK+
Sbjct: 660 LGDMPKRTYDLKREQTPLKELSLPKGLLLDEALERVLSLVAVGSKRFLTNKV 711


>AE014134-1030|AAN10574.1| 1354|Drosophila melanogaster CG9127-PC,
           isoform C protein.
          Length = 1354

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 14/52 (26%), Positives = 29/52 (55%)
 Frame = -3

Query: 511 MGHSPYIARPIKRSSRTVMKLSLNNRLYIPFIIKKLKSILFMGIQRYLKNKI 356
           +G  P     +KR    + +LSL   L +   ++++ S++ +G +R+L NK+
Sbjct: 641 LGDMPKRTYDLKREQTPLKELSLPKGLLLDEALERVLSLVAVGSKRFLTNKV 692


>AE014134-1029|AAN10573.1| 1354|Drosophila melanogaster CG9127-PB,
           isoform B protein.
          Length = 1354

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 14/52 (26%), Positives = 29/52 (55%)
 Frame = -3

Query: 511 MGHSPYIARPIKRSSRTVMKLSLNNRLYIPFIIKKLKSILFMGIQRYLKNKI 356
           +G  P     +KR    + +LSL   L +   ++++ S++ +G +R+L NK+
Sbjct: 641 LGDMPKRTYDLKREQTPLKELSLPKGLLLDEALERVLSLVAVGSKRFLTNKV 692


>AE014134-1028|AAF52329.1| 1354|Drosophila melanogaster CG9127-PA,
           isoform A protein.
          Length = 1354

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 14/52 (26%), Positives = 29/52 (55%)
 Frame = -3

Query: 511 MGHSPYIARPIKRSSRTVMKLSLNNRLYIPFIIKKLKSILFMGIQRYLKNKI 356
           +G  P     +KR    + +LSL   L +   ++++ S++ +G +R+L NK+
Sbjct: 641 LGDMPKRTYDLKREQTPLKELSLPKGLLLDEALERVLSLVAVGSKRFLTNKV 692


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,518,596
Number of Sequences: 53049
Number of extensions: 529472
Number of successful extensions: 1250
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1250
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)