Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1389
(650 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051823-1|AAK93247.1| 439|Drosophila melanogaster LD33178p pro... 122 6e-28
AE014297-2018|AAF55177.2| 439|Drosophila melanogaster CG31301-P... 122 6e-28
BT024459-1|ABC86521.1| 882|Drosophila melanogaster AT20596p pro... 30 2.4
BT003798-1|AAO41481.1| 927|Drosophila melanogaster AT25231p pro... 30 2.4
AL031863-5|CAA21319.1| 638|Drosophila melanogaster EG:EG0003.6 ... 30 2.4
AE014298-1528|ABI30975.1| 2693|Drosophila melanogaster CG2174-PB... 30 2.4
AE014296-640|AAF47760.1| 882|Drosophila melanogaster CG11526-PA... 30 2.4
AE014296-639|AAN11560.2| 927|Drosophila melanogaster CG11526-PB... 30 2.4
M32078-4|AAB59192.1| 2077|Drosophila melanogaster sodium channel... 28 9.6
>AY051823-1|AAK93247.1| 439|Drosophila melanogaster LD33178p
protein.
Length = 439
Score = 122 bits (293), Expect = 6e-28
Identities = 52/94 (55%), Positives = 75/94 (79%)
Frame = -2
Query: 484 DVDSLRTEHESEEQWEVRRSFLLEHKDDFPEAELVTLAQIYTNIEFLGCRYPPQTMKRIS 305
DVDS +TE+ES+E W++RRSF+L HKD F E LV LAQ + N+EF+GC+YP TM ++
Sbjct: 33 DVDSYKTEYESDEHWDLRRSFMLAHKDRFEEDRLVCLAQTFVNMEFMGCKYPSATMLLVA 92
Query: 304 VLAEKVSAKYKESRKNKLKRTFVQASDAAEQKAK 203
L+++++A +++ R+ +LKRTFV ASDAAEQ+AK
Sbjct: 93 ELSKEIAADFRQKREQRLKRTFVSASDAAEQRAK 126
>AE014297-2018|AAF55177.2| 439|Drosophila melanogaster CG31301-PA
protein.
Length = 439
Score = 122 bits (293), Expect = 6e-28
Identities = 52/94 (55%), Positives = 75/94 (79%)
Frame = -2
Query: 484 DVDSLRTEHESEEQWEVRRSFLLEHKDDFPEAELVTLAQIYTNIEFLGCRYPPQTMKRIS 305
DVDS +TE+ES+E W++RRSF+L HKD F E LV LAQ + N+EF+GC+YP TM ++
Sbjct: 33 DVDSYKTEYESDEHWDLRRSFMLAHKDRFEEDRLVCLAQTFVNMEFMGCKYPSATMLLVA 92
Query: 304 VLAEKVSAKYKESRKNKLKRTFVQASDAAEQKAK 203
L+++++A +++ R+ +LKRTFV ASDAAEQ+AK
Sbjct: 93 ELSKEIAADFRQKREQRLKRTFVSASDAAEQRAK 126
>BT024459-1|ABC86521.1| 882|Drosophila melanogaster AT20596p
protein.
Length = 882
Score = 30.3 bits (65), Expect = 2.4
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -2
Query: 487 IDVDSLRTEHE--SEEQWEVRRSFLLEHKDDFPEAELVTLAQIYTNIEFLGCRYPPQTMK 314
I +++R E E SE+ E+ SF+ E P+ EL+ + + F P MK
Sbjct: 184 IITETIRDEKEKGSEDYRELADSFVQEINSPLPDGELLAVKLLGMITRFCSGAAPQFPMK 243
Query: 313 RISVLAEKVS 284
++ +L KVS
Sbjct: 244 KVVLLLWKVS 253
>BT003798-1|AAO41481.1| 927|Drosophila melanogaster AT25231p
protein.
Length = 927
Score = 30.3 bits (65), Expect = 2.4
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -2
Query: 487 IDVDSLRTEHE--SEEQWEVRRSFLLEHKDDFPEAELVTLAQIYTNIEFLGCRYPPQTMK 314
I +++R E E SE+ E+ SF+ E P+ EL+ + + F P MK
Sbjct: 229 IITETIRDEKEKGSEDYRELADSFVQEINSPLPDGELLAVKLLGMITRFCSGAAPQFPMK 288
Query: 313 RISVLAEKVS 284
++ +L KVS
Sbjct: 289 KVVLLLWKVS 298
>AL031863-5|CAA21319.1| 638|Drosophila melanogaster EG:EG0003.6
protein.
Length = 638
Score = 30.3 bits (65), Expect = 2.4
Identities = 21/73 (28%), Positives = 32/73 (43%)
Frame = -2
Query: 421 LLEHKDDFPEAELVTLAQIYTNIEFLGCRYPPQTMKRISVLAEKVSAKYKESRKNKLKRT 242
LL D+ E E+ A + I + RYP +R+S + + AKY+E K K
Sbjct: 518 LLRQLDEGVEDEVQLPASVKIQIAKMR-RYPRMKRRRMSPILPAIKAKYEERPKKSKKPI 576
Query: 241 FVQASDAAEQKAK 203
+ A K+K
Sbjct: 577 TPAKNSKANNKSK 589
>AE014298-1528|ABI30975.1| 2693|Drosophila melanogaster CG2174-PB,
isoform B protein.
Length = 2693
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -2
Query: 433 RRSFLLEHKDDFPEAELVTLAQIYTNIEFLGCRYPPQTMKRISVLAEKVSAKYKES 266
+R LE +D P A + + L CRYP Q +KR+S L V A++ ++
Sbjct: 82 QRPASLEDFEDLPNLSAKHPALPSSRLRRLKCRYP-QVVKRLSTLCSDVIARHPQT 136
>AE014296-640|AAF47760.1| 882|Drosophila melanogaster CG11526-PA,
isoform A protein.
Length = 882
Score = 30.3 bits (65), Expect = 2.4
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -2
Query: 487 IDVDSLRTEHE--SEEQWEVRRSFLLEHKDDFPEAELVTLAQIYTNIEFLGCRYPPQTMK 314
I +++R E E SE+ E+ SF+ E P+ EL+ + + F P MK
Sbjct: 184 IITETIRDEKEKGSEDYRELADSFVQEINSPLPDGELLAVKLLGMITRFCSGAAPQFPMK 243
Query: 313 RISVLAEKVS 284
++ +L KVS
Sbjct: 244 KVVLLLWKVS 253
>AE014296-639|AAN11560.2| 927|Drosophila melanogaster CG11526-PB,
isoform B protein.
Length = 927
Score = 30.3 bits (65), Expect = 2.4
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -2
Query: 487 IDVDSLRTEHE--SEEQWEVRRSFLLEHKDDFPEAELVTLAQIYTNIEFLGCRYPPQTMK 314
I +++R E E SE+ E+ SF+ E P+ EL+ + + F P MK
Sbjct: 229 IITETIRDEKEKGSEDYRELADSFVQEINSPLPDGELLAVKLLGMITRFCSGAAPQFPMK 288
Query: 313 RISVLAEKVS 284
++ +L KVS
Sbjct: 289 KVVLLLWKVS 298
>M32078-4|AAB59192.1| 2077|Drosophila melanogaster sodium channel
alpha subunit protein.
Length = 2077
Score = 28.3 bits (60), Expect = 9.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 457 ESEEQWEVRRSFLLEHKDDFPEAEL 383
E + V RSF L+HKD FP+ +L
Sbjct: 900 EGVQGLSVLRSFRLDHKDRFPDGDL 924
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,272,706
Number of Sequences: 53049
Number of extensions: 455068
Number of successful extensions: 1385
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1385
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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