Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1385
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U20938-1|AAB51366.1| 1025|Homo sapiens dihydropyrimidine dehydro... 171 2e-42
U09178-1|AAA57474.1| 1025|Homo sapiens dihydropyrimidine dehydro... 171 2e-42
BX908805-1|CAI15125.1| 1025|Homo sapiens dihydropyrimidine dehyd... 171 2e-42
BC131777-1|AAI31778.1| 1025|Homo sapiens dihydropyrimidine dehyd... 171 2e-42
AL356457-3|CAH70570.1| 1025|Homo sapiens dihydropyrimidine dehyd... 171 2e-42
AB003063-1|BAA89789.1| 1025|Homo sapiens dihydropyrimidine dehyd... 171 2e-42
BC131778-1|AAI31779.1| 1025|Homo sapiens dihydropyrimidine dehyd... 170 5e-42
X76388-1|CAA53972.1| 599|Homo sapiens RNase L inhibitor protein. 31 5.2
DQ148409-1|AAZ38723.1| 599|Homo sapiens ATP-binding cassette, s... 31 5.2
BT009779-1|AAP88781.1| 599|Homo sapiens ATP-binding cassette, s... 31 5.2
BC016283-1|AAH16283.1| 599|Homo sapiens ATP-binding cassette, s... 31 5.2
AK127225-1|BAC86892.1| 178|Homo sapiens protein ( Homo sapiens ... 31 5.2
AB062293-1|BAB93476.1| 599|Homo sapiens ATP-binding cassette su... 31 5.2
D50487-1|BAA09078.1| 1220|Homo sapiens RNA helicase protein. 30 9.1
BC047327-1|AAH47327.2| 1220|Homo sapiens DEAH (Asp-Glu-Ala-His) ... 30 9.1
BC046632-1|AAH46632.1| 168|Homo sapiens gremlin 2, cysteine kno... 30 9.1
BC044586-1|AAH44586.2| 1220|Homo sapiens DEAH (Asp-Glu-Ala-His) ... 30 9.1
BC020697-1|AAH20697.1| 119|Homo sapiens Unknown (protein for IM... 30 9.1
>U20938-1|AAB51366.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 171 bits (416), Expect = 2e-42
Identities = 80/171 (46%), Positives = 112/171 (65%)
Frame = -1
Query: 625 LSTRKENPVQTIRDENGKVLTHFGIYNKKREQILHQNRLKLGLLDDDCVVDNRSTNGSTY 446
+S +K PV I + K L FG Y ++R++I+ +N+++L + V +
Sbjct: 857 VSHQKGKPVPRIAELMDKKLPSFGPYLEQRKKIIAENKIRL---KEQNVAFSPLKRNCFI 913
Query: 445 GLSAVPRISDVLGQALPKVGAYKHLDNKLQVVALIDDDMCINCGKCYMACADSGYQAIEF 266
+P I DV+G+AL +G + L N QVVA+ID++MCINCGKCYM C DSGYQAI+F
Sbjct: 914 PKRPIPTIKDVIGKALQYLGTFGELSNVEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQF 973
Query: 265 DSDTHLPHVTDDCTGCTLCLSVCPIIDCISMVPKKIPHVIKRGLGYEIHPI 113
D +THLP +TD CTGCTLCLSVCPI+DCI MV + P+ KRG+ ++P+
Sbjct: 974 DPETHLPTITDTCTGCTLCLSVCPIVDCIKMVSRTTPYEPKRGVPLSVNPV 1024
>U09178-1|AAA57474.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 171 bits (416), Expect = 2e-42
Identities = 80/171 (46%), Positives = 112/171 (65%)
Frame = -1
Query: 625 LSTRKENPVQTIRDENGKVLTHFGIYNKKREQILHQNRLKLGLLDDDCVVDNRSTNGSTY 446
+S +K PV I + K L FG Y ++R++I+ +N+++L + V +
Sbjct: 857 VSHQKGKPVPRIAELMDKKLPSFGPYLEQRKKIIAENKIRL---KEQNVAFSPLKRSCFI 913
Query: 445 GLSAVPRISDVLGQALPKVGAYKHLDNKLQVVALIDDDMCINCGKCYMACADSGYQAIEF 266
+P I DV+G+AL +G + L N QVVA+ID++MCINCGKCYM C DSGYQAI+F
Sbjct: 914 PKRPIPTIKDVIGKALQYLGTFGELSNVEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQF 973
Query: 265 DSDTHLPHVTDDCTGCTLCLSVCPIIDCISMVPKKIPHVIKRGLGYEIHPI 113
D +THLP +TD CTGCTLCLSVCPI+DCI MV + P+ KRG+ ++P+
Sbjct: 974 DPETHLPTITDTCTGCTLCLSVCPIVDCIKMVSRTTPYEPKRGVPLSVNPV 1024
>BX908805-1|CAI15125.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 171 bits (416), Expect = 2e-42
Identities = 80/171 (46%), Positives = 112/171 (65%)
Frame = -1
Query: 625 LSTRKENPVQTIRDENGKVLTHFGIYNKKREQILHQNRLKLGLLDDDCVVDNRSTNGSTY 446
+S +K PV I + K L FG Y ++R++I+ +N+++L + V +
Sbjct: 857 VSHQKGKPVPRIAELMDKKLPSFGPYLEQRKKIIAENKIRL---KEQNVAFSPLKRNCFI 913
Query: 445 GLSAVPRISDVLGQALPKVGAYKHLDNKLQVVALIDDDMCINCGKCYMACADSGYQAIEF 266
+P I DV+G+AL +G + L N QVVA+ID++MCINCGKCYM C DSGYQAI+F
Sbjct: 914 PKRPIPTIKDVIGKALQYLGTFGELSNVEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQF 973
Query: 265 DSDTHLPHVTDDCTGCTLCLSVCPIIDCISMVPKKIPHVIKRGLGYEIHPI 113
D +THLP +TD CTGCTLCLSVCPI+DCI MV + P+ KRG+ ++P+
Sbjct: 974 DPETHLPTITDTCTGCTLCLSVCPIVDCIKMVSRTTPYEPKRGVPLSVNPV 1024
>BC131777-1|AAI31778.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 171 bits (416), Expect = 2e-42
Identities = 80/171 (46%), Positives = 112/171 (65%)
Frame = -1
Query: 625 LSTRKENPVQTIRDENGKVLTHFGIYNKKREQILHQNRLKLGLLDDDCVVDNRSTNGSTY 446
+S +K PV I + K L FG Y ++R++I+ +N+++L + V +
Sbjct: 857 VSHQKGKPVPRIAELMDKKLPSFGPYLEQRKKIIAENKIRL---KEQNVAFSPLKRNCFI 913
Query: 445 GLSAVPRISDVLGQALPKVGAYKHLDNKLQVVALIDDDMCINCGKCYMACADSGYQAIEF 266
+P I DV+G+AL +G + L N QVVA+ID++MCINCGKCYM C DSGYQAI+F
Sbjct: 914 PKRPIPTIKDVIGKALQYLGTFGELSNVEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQF 973
Query: 265 DSDTHLPHVTDDCTGCTLCLSVCPIIDCISMVPKKIPHVIKRGLGYEIHPI 113
D +THLP +TD CTGCTLCLSVCPI+DCI MV + P+ KRG+ ++P+
Sbjct: 974 DPETHLPTITDTCTGCTLCLSVCPIVDCIKMVSRTTPYEPKRGVPLSVNPV 1024
>AL356457-3|CAH70570.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 171 bits (416), Expect = 2e-42
Identities = 80/171 (46%), Positives = 112/171 (65%)
Frame = -1
Query: 625 LSTRKENPVQTIRDENGKVLTHFGIYNKKREQILHQNRLKLGLLDDDCVVDNRSTNGSTY 446
+S +K PV I + K L FG Y ++R++I+ +N+++L + V +
Sbjct: 857 VSHQKGKPVPRIAELMDKKLPSFGPYLEQRKKIIAENKIRL---KEQNVAFSPLKRNCFI 913
Query: 445 GLSAVPRISDVLGQALPKVGAYKHLDNKLQVVALIDDDMCINCGKCYMACADSGYQAIEF 266
+P I DV+G+AL +G + L N QVVA+ID++MCINCGKCYM C DSGYQAI+F
Sbjct: 914 PKRPIPTIKDVIGKALQYLGTFGELSNVEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQF 973
Query: 265 DSDTHLPHVTDDCTGCTLCLSVCPIIDCISMVPKKIPHVIKRGLGYEIHPI 113
D +THLP +TD CTGCTLCLSVCPI+DCI MV + P+ KRG+ ++P+
Sbjct: 974 DPETHLPTITDTCTGCTLCLSVCPIVDCIKMVSRTTPYEPKRGVPLSVNPV 1024
>AB003063-1|BAA89789.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 171 bits (416), Expect = 2e-42
Identities = 80/171 (46%), Positives = 112/171 (65%)
Frame = -1
Query: 625 LSTRKENPVQTIRDENGKVLTHFGIYNKKREQILHQNRLKLGLLDDDCVVDNRSTNGSTY 446
+S +K PV I + K L FG Y ++R++I+ +N+++L + V +
Sbjct: 857 VSHQKGKPVPRIAELMDKKLPSFGPYLEQRKKIIAENKIRL---KEQNVAFSPLKRNCFI 913
Query: 445 GLSAVPRISDVLGQALPKVGAYKHLDNKLQVVALIDDDMCINCGKCYMACADSGYQAIEF 266
+P I DV+G+AL +G + L N QVVA+ID++MCINCGKCYM C DSGYQAI+F
Sbjct: 914 PKRPIPTIKDVIGKALQYLGTFGELSNVEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQF 973
Query: 265 DSDTHLPHVTDDCTGCTLCLSVCPIIDCISMVPKKIPHVIKRGLGYEIHPI 113
D +THLP +TD CTGCTLCLSVCPI+DCI MV + P+ KRG+ ++P+
Sbjct: 974 DPETHLPTITDTCTGCTLCLSVCPIVDCIKMVSRTTPYEPKRGVPLSVNPV 1024
>BC131778-1|AAI31779.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 170 bits (413), Expect = 5e-42
Identities = 80/170 (47%), Positives = 111/170 (65%)
Frame = -1
Query: 625 LSTRKENPVQTIRDENGKVLTHFGIYNKKREQILHQNRLKLGLLDDDCVVDNRSTNGSTY 446
+S +K PV I + K L FG Y ++R++I+ +N+++L + V +
Sbjct: 857 VSHQKGKPVPRIAELMDKKLPSFGPYLEQRKKIIAENKIRL---KEQNVAFSPLKRNCFI 913
Query: 445 GLSAVPRISDVLGQALPKVGAYKHLDNKLQVVALIDDDMCINCGKCYMACADSGYQAIEF 266
+P I DV+G+AL +G + L N QVVA+ID++MCINCGKCYM C DSGYQAI+F
Sbjct: 914 PKRPIPTIKDVIGKALQYLGTFGELSNVEQVVAMIDEEMCINCGKCYMTCNDSGYQAIQF 973
Query: 265 DSDTHLPHVTDDCTGCTLCLSVCPIIDCISMVPKKIPHVIKRGLGYEIHP 116
D +THLP +TD CTGCTLCLSVCPI+DCI MV + P+ KRG+ ++P
Sbjct: 974 DPETHLPTITDTCTGCTLCLSVCPIVDCIKMVSRTTPYEPKRGVPLSVNP 1023
>X76388-1|CAA53972.1| 599|Homo sapiens RNase L inhibitor protein.
Length = 599
Score = 30.7 bits (66), Expect = 5.2
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Frame = -1
Query: 367 NKLQVVALIDDDMCINCGKCYMACADS------GYQAIEFDSDTHLPHVTDD-CTGCTLC 209
+KL +A+++ D C KC C S G IE + + +++ C GC +C
Sbjct: 3 DKLTRIAIVNHDKC-KPKKCRQECKKSCPVVRMGKLCIEVTPQSKIAWISETLCIGCGIC 61
Query: 208 LSVCP 194
+ CP
Sbjct: 62 IKKCP 66
>DQ148409-1|AAZ38723.1| 599|Homo sapiens ATP-binding cassette,
sub-family E (OABP), member 1 protein.
Length = 599
Score = 30.7 bits (66), Expect = 5.2
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Frame = -1
Query: 367 NKLQVVALIDDDMCINCGKCYMACADS------GYQAIEFDSDTHLPHVTDD-CTGCTLC 209
+KL +A+++ D C KC C S G IE + + +++ C GC +C
Sbjct: 3 DKLTRIAIVNHDKC-KPKKCRQECKKSCPVVRMGKLCIEVTPQSKIAWISETLCIGCGIC 61
Query: 208 LSVCP 194
+ CP
Sbjct: 62 IKKCP 66
>BT009779-1|AAP88781.1| 599|Homo sapiens ATP-binding cassette,
sub-family E (OABP), member 1 protein.
Length = 599
Score = 30.7 bits (66), Expect = 5.2
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Frame = -1
Query: 367 NKLQVVALIDDDMCINCGKCYMACADS------GYQAIEFDSDTHLPHVTDD-CTGCTLC 209
+KL +A+++ D C KC C S G IE + + +++ C GC +C
Sbjct: 3 DKLTRIAIVNHDKC-KPKKCRQECKKSCPVVRMGKLCIEVTPQSKIAWISETLCIGCGIC 61
Query: 208 LSVCP 194
+ CP
Sbjct: 62 IKKCP 66
>BC016283-1|AAH16283.1| 599|Homo sapiens ATP-binding cassette,
sub-family E (OABP), member 1 protein.
Length = 599
Score = 30.7 bits (66), Expect = 5.2
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Frame = -1
Query: 367 NKLQVVALIDDDMCINCGKCYMACADS------GYQAIEFDSDTHLPHVTDD-CTGCTLC 209
+KL +A+++ D C KC C S G IE + + +++ C GC +C
Sbjct: 3 DKLTRIAIVNHDKC-KPKKCRQECKKSCPVVRMGKLCIEVTPQSKIAWISETLCIGCGIC 61
Query: 208 LSVCP 194
+ CP
Sbjct: 62 IKKCP 66
>AK127225-1|BAC86892.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ45292 fis, clone BRHIP3002931. ).
Length = 178
Score = 30.7 bits (66), Expect = 5.2
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -1
Query: 328 CINCGKCYMACADSGYQAIEFDSDTHLPHVTDDCTGCTLC 209
C CG C C S + A + DS+ HLP V+ D T C
Sbjct: 27 CPCCG-CEDVCCTSQFPAQDKDSERHLPGVSGDGTQWRAC 65
>AB062293-1|BAB93476.1| 599|Homo sapiens ATP-binding cassette
sub-family E member 1 protein.
Length = 599
Score = 30.7 bits (66), Expect = 5.2
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Frame = -1
Query: 367 NKLQVVALIDDDMCINCGKCYMACADS------GYQAIEFDSDTHLPHVTDD-CTGCTLC 209
+KL +A+++ D C KC C S G IE + + +++ C GC +C
Sbjct: 3 DKLTRIAIVNHDKC-KPKKCRQECKKSCPVVRMGKLCIEVTPQSKIAWISETLCIGCGIC 61
Query: 208 LSVCP 194
+ CP
Sbjct: 62 IKKCP 66
>D50487-1|BAA09078.1| 1220|Homo sapiens RNA helicase protein.
Length = 1220
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 260 RIEFYRLVPRVCTRHVAFSAIDTHIIINERDDLEFIIQV 376
++E+ LV +VCT +D H+ IN++D EF+I +
Sbjct: 24 KLEYLSLVSKVCTE------LDNHLGINDKDLAEFVISL 56
>BC047327-1|AAH47327.2| 1220|Homo sapiens DEAH (Asp-Glu-Ala-His) box
polypeptide 8 protein.
Length = 1220
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 260 RIEFYRLVPRVCTRHVAFSAIDTHIIINERDDLEFIIQV 376
++E+ LV +VCT +D H+ IN++D EF+I +
Sbjct: 24 KLEYLSLVSKVCTE------LDNHLGINDKDLAEFVISL 56
>BC046632-1|AAH46632.1| 168|Homo sapiens gremlin 2, cysteine knot
superfamily, homolog (Xenopus laevis) protein.
Length = 168
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 692 LKLFCIYVLVA*TDGRDNSPPTFKHQKGKPGTNNS*RKWK 573
L LF + VLV + R N P H K G++N+ +W+
Sbjct: 7 LSLFMVAVLVKVAEARKNRPAGAIHSPYKDGSSNNSERWQ 46
>BC044586-1|AAH44586.2| 1220|Homo sapiens DEAH (Asp-Glu-Ala-His) box
polypeptide 8 protein.
Length = 1220
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 260 RIEFYRLVPRVCTRHVAFSAIDTHIIINERDDLEFIIQV 376
++E+ LV +VCT +D H+ IN++D EF+I +
Sbjct: 24 KLEYLSLVSKVCTE------LDNHLGINDKDLAEFVISL 56
>BC020697-1|AAH20697.1| 119|Homo sapiens Unknown (protein for
IMAGE:4658842) protein.
Length = 119
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 260 RIEFYRLVPRVCTRHVAFSAIDTHIIINERDDLEFIIQV 376
++E+ LV +VCT +D H+ IN++D EF+I +
Sbjct: 24 KLEYLSLVSKVCTE------LDNHLGINDKDLAEFVISL 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,028,921
Number of Sequences: 237096
Number of extensions: 2362039
Number of successful extensions: 4638
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4631
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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