Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1385
(700 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ027826-1|AAY44826.1| 1031|Drosophila melanogaster suppressor-o... 204 7e-53
AY058259-1|AAL13488.1| 864|Drosophila melanogaster GH01650p pro... 204 7e-53
AF545061-1|AAN64918.1| 1031|Drosophila melanogaster dihydropyrim... 204 7e-53
AE014298-1301|AAN09247.1| 1031|Drosophila melanogaster CG2194-PC... 204 7e-53
AE014298-1300|AAF46461.2| 1031|Drosophila melanogaster CG2194-PB... 204 7e-53
U65491-1|AAC47288.1| 626|Drosophila melanogaster Dreg-3 protein... 204 9e-53
AY069470-1|AAL39615.1| 480|Drosophila melanogaster LD21294p pro... 33 0.37
AE014298-2095|AAF48418.1| 480|Drosophila melanogaster CG5560-PA... 33 0.37
AY118656-1|AAM50025.1| 1242|Drosophila melanogaster SD07467p pro... 30 3.5
AE013599-1825|AAF58294.1| 1242|Drosophila melanogaster CG8241-PA... 30 3.5
AY089644-1|AAL90382.1| 611|Drosophila melanogaster RE71924p pro... 29 8.0
AE014296-1555|AAN11979.1| 611|Drosophila melanogaster CG5651-PB... 29 8.0
AE014296-1554|AAF50342.1| 611|Drosophila melanogaster CG5651-PA... 29 8.0
>DQ027826-1|AAY44826.1| 1031|Drosophila melanogaster
suppressor-of-rudimentary dihydropyrimidine dehydrogenase
mutant protein.
Length = 1031
Score = 204 bits (499), Expect = 7e-53
Identities = 99/166 (59%), Positives = 120/166 (72%), Gaps = 1/166 (0%)
Frame = -1
Query: 616 RKENPVQTIRDENGKVLTHFGIYNKKREQILHQNRLKLGLLDDDCVVDNRSTNGSTYGL- 440
+K PV + E L FG Y ++R+ + + R + G L D V ++T ++ G
Sbjct: 858 QKGKPVVRLTGEGKATLGFFGPYQRQRDIKMAELRSQKGALWDAEQV--KATPPASNGAP 915
Query: 439 SAVPRISDVLGQALPKVGAYKHLDNKLQVVALIDDDMCINCGKCYMACADSGYQAIEFDS 260
+ PRI DV+G AL K+G+Y LDNK Q VALIDDDMCINCGKCYM CADSGYQAIEFD
Sbjct: 916 NPAPRIKDVIGAALDKIGSYNKLDNKQQKVALIDDDMCINCGKCYMTCADSGYQAIEFDK 975
Query: 259 DTHLPHVTDDCTGCTLCLSVCPIIDCISMVPKKIPHVIKRGLGYEI 122
DTH+PHV DDCTGCTLC+SVCPIIDCI+MVPKKIPHVIKRG+ +I
Sbjct: 976 DTHIPHVNDDCTGCTLCVSVCPIIDCITMVPKKIPHVIKRGVEEKI 1021
>AY058259-1|AAL13488.1| 864|Drosophila melanogaster GH01650p protein.
Length = 864
Score = 204 bits (499), Expect = 7e-53
Identities = 99/166 (59%), Positives = 120/166 (72%), Gaps = 1/166 (0%)
Frame = -1
Query: 616 RKENPVQTIRDENGKVLTHFGIYNKKREQILHQNRLKLGLLDDDCVVDNRSTNGSTYGL- 440
+K PV + E L FG Y ++R+ + + R + G L D V ++T ++ G
Sbjct: 691 QKGKPVVRLTGEGKATLGFFGPYQRQRDIKMAELRSQKGALWDAEQV--KATPPASNGAP 748
Query: 439 SAVPRISDVLGQALPKVGAYKHLDNKLQVVALIDDDMCINCGKCYMACADSGYQAIEFDS 260
+ PRI DV+G AL K+G+Y LDNK Q VALIDDDMCINCGKCYM CADSGYQAIEFD
Sbjct: 749 NPAPRIKDVIGAALDKIGSYNKLDNKQQKVALIDDDMCINCGKCYMTCADSGYQAIEFDK 808
Query: 259 DTHLPHVTDDCTGCTLCLSVCPIIDCISMVPKKIPHVIKRGLGYEI 122
DTH+PHV DDCTGCTLC+SVCPIIDCI+MVPKKIPHVIKRG+ +I
Sbjct: 809 DTHIPHVNDDCTGCTLCVSVCPIIDCITMVPKKIPHVIKRGVEEKI 854
>AF545061-1|AAN64918.1| 1031|Drosophila melanogaster dihydropyrimidine
dehydrogenase protein.
Length = 1031
Score = 204 bits (499), Expect = 7e-53
Identities = 99/166 (59%), Positives = 120/166 (72%), Gaps = 1/166 (0%)
Frame = -1
Query: 616 RKENPVQTIRDENGKVLTHFGIYNKKREQILHQNRLKLGLLDDDCVVDNRSTNGSTYGL- 440
+K PV + E L FG Y ++R+ + + R + G L D V ++T ++ G
Sbjct: 858 QKGKPVVRLTGEGKATLGFFGPYQRQRDIKMAELRSQKGALWDAEQV--KATPPASNGAP 915
Query: 439 SAVPRISDVLGQALPKVGAYKHLDNKLQVVALIDDDMCINCGKCYMACADSGYQAIEFDS 260
+ PRI DV+G AL K+G+Y LDNK Q VALIDDDMCINCGKCYM CADSGYQAIEFD
Sbjct: 916 NPAPRIKDVIGAALDKIGSYNKLDNKQQKVALIDDDMCINCGKCYMTCADSGYQAIEFDK 975
Query: 259 DTHLPHVTDDCTGCTLCLSVCPIIDCISMVPKKIPHVIKRGLGYEI 122
DTH+PHV DDCTGCTLC+SVCPIIDCI+MVPKKIPHVIKRG+ +I
Sbjct: 976 DTHIPHVNDDCTGCTLCVSVCPIIDCITMVPKKIPHVIKRGVEEKI 1021
>AE014298-1301|AAN09247.1| 1031|Drosophila melanogaster CG2194-PC,
isoform C protein.
Length = 1031
Score = 204 bits (499), Expect = 7e-53
Identities = 99/166 (59%), Positives = 120/166 (72%), Gaps = 1/166 (0%)
Frame = -1
Query: 616 RKENPVQTIRDENGKVLTHFGIYNKKREQILHQNRLKLGLLDDDCVVDNRSTNGSTYGL- 440
+K PV + E L FG Y ++R+ + + R + G L D V ++T ++ G
Sbjct: 858 QKGKPVVRLTGEGKATLGFFGPYQRQRDIKMAELRSQKGALWDAEQV--KATPPASNGAP 915
Query: 439 SAVPRISDVLGQALPKVGAYKHLDNKLQVVALIDDDMCINCGKCYMACADSGYQAIEFDS 260
+ PRI DV+G AL K+G+Y LDNK Q VALIDDDMCINCGKCYM CADSGYQAIEFD
Sbjct: 916 NPAPRIKDVIGAALDKIGSYNKLDNKQQKVALIDDDMCINCGKCYMTCADSGYQAIEFDK 975
Query: 259 DTHLPHVTDDCTGCTLCLSVCPIIDCISMVPKKIPHVIKRGLGYEI 122
DTH+PHV DDCTGCTLC+SVCPIIDCI+MVPKKIPHVIKRG+ +I
Sbjct: 976 DTHIPHVNDDCTGCTLCVSVCPIIDCITMVPKKIPHVIKRGVEEKI 1021
>AE014298-1300|AAF46461.2| 1031|Drosophila melanogaster CG2194-PB,
isoform B protein.
Length = 1031
Score = 204 bits (499), Expect = 7e-53
Identities = 99/166 (59%), Positives = 120/166 (72%), Gaps = 1/166 (0%)
Frame = -1
Query: 616 RKENPVQTIRDENGKVLTHFGIYNKKREQILHQNRLKLGLLDDDCVVDNRSTNGSTYGL- 440
+K PV + E L FG Y ++R+ + + R + G L D V ++T ++ G
Sbjct: 858 QKGKPVVRLTGEGKATLGFFGPYQRQRDIKMAELRSQKGALWDAEQV--KATPPASNGAP 915
Query: 439 SAVPRISDVLGQALPKVGAYKHLDNKLQVVALIDDDMCINCGKCYMACADSGYQAIEFDS 260
+ PRI DV+G AL K+G+Y LDNK Q VALIDDDMCINCGKCYM CADSGYQAIEFD
Sbjct: 916 NPAPRIKDVIGAALDKIGSYNKLDNKQQKVALIDDDMCINCGKCYMTCADSGYQAIEFDK 975
Query: 259 DTHLPHVTDDCTGCTLCLSVCPIIDCISMVPKKIPHVIKRGLGYEI 122
DTH+PHV DDCTGCTLC+SVCPIIDCI+MVPKKIPHVIKRG+ +I
Sbjct: 976 DTHIPHVNDDCTGCTLCVSVCPIIDCITMVPKKIPHVIKRGVEEKI 1021
>U65491-1|AAC47288.1| 626|Drosophila melanogaster Dreg-3 protein
protein.
Length = 626
Score = 204 bits (498), Expect = 9e-53
Identities = 96/156 (61%), Positives = 112/156 (71%), Gaps = 1/156 (0%)
Frame = -1
Query: 586 DENGKV-LTHFGIYNKKREQILHQNRLKLGLLDDDCVVDNRSTNGSTYGLSAVPRISDVL 410
D GK L FG Y ++R+ + + R + G L D + S + PRI DV+
Sbjct: 461 DRRGKATLGFFGPYQRQRDIKMAELRSQKGALSWDAEQVKATPPASNGAPNPAPRIKDVI 520
Query: 409 GQALPKVGAYKHLDNKLQVVALIDDDMCINCGKCYMACADSGYQAIEFDSDTHLPHVTDD 230
G AL K+G+Y LDNK Q VALIDDDMCINCGKCYM CADSGYQAIEFD DTH+PHV DD
Sbjct: 521 GAALDKIGSYNKLDNKQQKVALIDDDMCINCGKCYMTCADSGYQAIEFDKDTHIPHVNDD 580
Query: 229 CTGCTLCLSVCPIIDCISMVPKKIPHVIKRGLGYEI 122
CTGCTLC+SVCPIIDCI+MVPKKIPHVIKRG+ +I
Sbjct: 581 CTGCTLCVSVCPIIDCITMVPKKIPHVIKRGVEEKI 616
Score = 29.1 bits (62), Expect = 6.1
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 607 NPVQTIRDENGKVLTHFGIYNKKREQILHQNRLKLGLLDDDCVVD 473
NP I+D G L G YNK L + K+ L+DDD ++
Sbjct: 511 NPAPRIKDVIGAALDKIGSYNK-----LDNKQQKVALIDDDMCIN 550
>AY069470-1|AAL39615.1| 480|Drosophila melanogaster LD21294p
protein.
Length = 480
Score = 33.1 bits (72), Expect = 0.37
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 327 HISSSMSATTWSLLSRCLYAPTLGR 401
H SS+ +TWSLL R ++AP L R
Sbjct: 372 HYGSSLMGSTWSLLRRVMFAPPLAR 396
>AE014298-2095|AAF48418.1| 480|Drosophila melanogaster CG5560-PA
protein.
Length = 480
Score = 33.1 bits (72), Expect = 0.37
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 327 HISSSMSATTWSLLSRCLYAPTLGR 401
H SS+ +TWSLL R ++AP L R
Sbjct: 372 HYGSSLMGSTWSLLRRVMFAPPLAR 396
>AY118656-1|AAM50025.1| 1242|Drosophila melanogaster SD07467p
protein.
Length = 1242
Score = 29.9 bits (64), Expect = 3.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 260 RIEFYRLVPRVCTRHVAFSAIDTHIIINERDDLEFIIQV 376
++E+ LV ++CT +D H+ IN++D EFII +
Sbjct: 6 KLEYLSLVSKICTE------LDNHLGINDKDLAEFIIDL 38
>AE013599-1825|AAF58294.1| 1242|Drosophila melanogaster CG8241-PA
protein.
Length = 1242
Score = 29.9 bits (64), Expect = 3.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 260 RIEFYRLVPRVCTRHVAFSAIDTHIIINERDDLEFIIQV 376
++E+ LV ++CT +D H+ IN++D EFII +
Sbjct: 6 KLEYLSLVSKICTE------LDNHLGINDKDLAEFIIDL 38
>AY089644-1|AAL90382.1| 611|Drosophila melanogaster RE71924p
protein.
Length = 611
Score = 28.7 bits (61), Expect = 8.0
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = -1
Query: 352 VALIDDDMCI--NCGK-CYMAC--ADSGYQAIEFDSDTHLPHVTDD-CTGCTLCLSVCP 194
+A++ DD C C + C C G IE + + ++++ C GC +C+ CP
Sbjct: 16 IAIVSDDKCKPKRCRQECKKTCPVVRMGKLCIEVTPTSKIASLSEELCIGCGICVKKCP 74
>AE014296-1555|AAN11979.1| 611|Drosophila melanogaster CG5651-PB,
isoform B protein.
Length = 611
Score = 28.7 bits (61), Expect = 8.0
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = -1
Query: 352 VALIDDDMCI--NCGK-CYMAC--ADSGYQAIEFDSDTHLPHVTDD-CTGCTLCLSVCP 194
+A++ DD C C + C C G IE + + ++++ C GC +C+ CP
Sbjct: 16 IAIVSDDKCKPKRCRQECKKTCPVVRMGKLCIEVTPTSKIASLSEELCIGCGICVKKCP 74
>AE014296-1554|AAF50342.1| 611|Drosophila melanogaster CG5651-PA,
isoform A protein.
Length = 611
Score = 28.7 bits (61), Expect = 8.0
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = -1
Query: 352 VALIDDDMCI--NCGK-CYMAC--ADSGYQAIEFDSDTHLPHVTDD-CTGCTLCLSVCP 194
+A++ DD C C + C C G IE + + ++++ C GC +C+ CP
Sbjct: 16 IAIVSDDKCKPKRCRQECKKTCPVVRMGKLCIEVTPTSKIASLSEELCIGCGICVKKCP 74
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,057,866
Number of Sequences: 53049
Number of extensions: 714401
Number of successful extensions: 1773
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1768
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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