Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1385
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39742-6|AAK39195.2| 1059|Caenorhabditis elegans Hypothetical pr... 161 6e-40
AL110487-1|CAB54424.1| 610|Caenorhabditis elegans Hypothetical ... 35 0.064
AC098856-8|ABO52819.1| 384|Caenorhabditis elegans Hypothetical ... 32 0.45
U58753-6|AAC24440.1| 705|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81116-7|CAB03306.1| 669|Caenorhabditis elegans Hypothetical pr... 29 2.4
U50300-8|AAC48105.1| 646|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical ... 29 3.2
AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical ... 29 3.2
Z83118-1|CAB05575.1| 975|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z82283-4|CAB05286.1| 689|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z81552-6|CAB04489.1| 975|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z81066-1|CAB02970.1| 919|Caenorhabditis elegans Hypothetical pr... 29 4.2
U58753-4|AAC24435.2| 312|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z92830-7|CAB07360.1| 659|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z81492-4|CAB04031.1| 624|Caenorhabditis elegans Hypothetical pr... 28 5.6
AF036705-10|AAB95167.2| 612|Caenorhabditis elegans Hypothetical... 28 5.6
AF036705-9|AAO91724.1| 686|Caenorhabditis elegans Hypothetical ... 28 5.6
AF036705-8|AAB95169.1| 685|Caenorhabditis elegans Hypothetical ... 28 5.6
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 28 5.6
Z98851-5|CAB11541.1| 596|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z98851-4|CAB11542.1| 607|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z98851-3|CAB11538.2| 659|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z82055-10|CAB04848.2| 659|Caenorhabditis elegans Hypothetical p... 28 7.4
Z81595-2|CAB04749.1| 527|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81537-4|CAB04375.2| 669|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81537-2|CAB04373.1| 682|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81528-6|CAB04285.1| 633|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81502-5|CAB04108.2| 672|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81455-3|CAB03808.2| 890|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81147-5|CAB03534.1| 663|Caenorhabditis elegans Hypothetical pr... 28 7.4
U80436-7|AAC71109.1| 1638|Caenorhabditis elegans Uncoordinated p... 28 7.4
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p... 28 7.4
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p... 28 7.4
L14324-3|AAA28185.1| 851|Caenorhabditis elegans Abnormal nucleo... 28 7.4
CU457741-7|CAM36348.1| 710|Caenorhabditis elegans Hypothetical ... 28 7.4
AL032623-19|CAA21519.2| 890|Caenorhabditis elegans Hypothetical... 28 7.4
AF048835-1|AAC12932.1| 1638|Caenorhabditis elegans guanine nucle... 28 7.4
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle... 28 7.4
AF047027-1|AAC14263.1| 851|Caenorhabditis elegans B box zinc fi... 28 7.4
AF016654-1|AAB66028.1| 731|Caenorhabditis elegans Hypothetical ... 28 7.4
Z81553-10|CAB04501.2| 668|Caenorhabditis elegans Hypothetical p... 27 9.8
Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z81528-5|CAB04287.1| 698|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z81467-3|CAC42255.1| 1143|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z81467-2|CAC42254.1| 1147|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z81147-10|CAB03533.3| 671|Caenorhabditis elegans Hypothetical p... 27 9.8
AF195611-1|AAF15530.1| 1147|Caenorhabditis elegans LIN-41B protein. 27 9.8
AF195610-1|AAF15529.1| 1143|Caenorhabditis elegans LIN-41A protein. 27 9.8
AF016424-1|AAB65331.2| 617|Caenorhabditis elegans Hypothetical ... 27 9.8
>U39742-6|AAK39195.2| 1059|Caenorhabditis elegans Hypothetical protein
C25F6.3 protein.
Length = 1059
Score = 161 bits (390), Expect = 6e-40
Identities = 81/158 (51%), Positives = 102/158 (64%), Gaps = 2/158 (1%)
Frame = -1
Query: 574 KVLTHFGIYNKKREQILHQNRLKLGLLDDDCVVDNRSTNGSTYGLSAVPRISDVLGQALP 395
K + FG Y +RE++ + LLD + + + +S VP + DV+G+ALP
Sbjct: 885 KKMPFFGKYRDEREKLEAIKLSESNLLDTE---NYHFASRPDTQVSRVPTVEDVIGKALP 941
Query: 394 KVGAYKHLDNKLQVVALIDDDMCINCGKCYMACADSGYQAIEFDSDTHLPHVT-DDCTGC 218
++G Y LDN+ Q VA+IDDDMCINCGKCYM C DSGYQAI FD TH PHVT DDCTGC
Sbjct: 942 RIGPYVTLDNQEQKVAIIDDDMCINCGKCYMTCNDSGYQAITFDPVTHQPHVTEDDCTGC 1001
Query: 217 TLCLSVCPIIDCISMVPKKIP-HVIKRGLGYEIHPISP 107
TLC SVCPI +CI MVP+ P KRG+ + P +P
Sbjct: 1002 TLCYSVCPIPECIEMVPRTGPWKAPKRGVKPSVEPGTP 1039
>AL110487-1|CAB54424.1| 610|Caenorhabditis elegans Hypothetical
protein Y39E4B.1 protein.
Length = 610
Score = 34.7 bits (76), Expect = 0.064
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Frame = -1
Query: 352 VALIDDDMCI--NCG-KCYMACADS--GYQAIEFDSDTHLPHVTDD-CTGCTLCLSVCPI 191
+A+++ D C NCG C AC + G Q I ++ + + +++ C GC +C+ CP
Sbjct: 19 IAIVEKDRCKPKNCGLACKRACPVNRQGKQCIVVEATSTISQISEILCIGCGICVKKCP- 77
Query: 190 IDCISMV 170
D I ++
Sbjct: 78 YDAIKII 84
>AC098856-8|ABO52819.1| 384|Caenorhabditis elegans Hypothetical
protein Y37F4.6 protein.
Length = 384
Score = 31.9 bits (69), Expect = 0.45
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 454 CHWSNDCQQHSRRPVNLILIY-FDGESVRVFCCKYR 558
C W +DC + P ++ + Y FD ESV++FCC R
Sbjct: 60 CPW-DDCPHSFQDPQDMRIHYMFDHESVKLFCCGNR 94
>U58753-6|AAC24440.1| 705|Caenorhabditis elegans Hypothetical
protein W03B1.8 protein.
Length = 705
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 230 IISHMWKMGVRIEFYRLVPRVCTRHVAFSAI 322
I +H W + V I+FY LVP + FS I
Sbjct: 140 IFTHTWSLSVEIQFYFLVPFIFIISTYFSEI 170
>Z81116-7|CAB03306.1| 669|Caenorhabditis elegans Hypothetical
protein T06C12.8 protein.
Length = 669
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 221 TSAIISHMWKMGVRIEFYRLVP 286
T I +H W + V I+FY LVP
Sbjct: 136 TGDIFAHTWSLSVEIQFYFLVP 157
>U50300-8|AAC48105.1| 646|Caenorhabditis elegans Hypothetical
protein R03H4.6 protein.
Length = 646
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +2
Query: 239 HMWKMGVRIEFYRLVP 286
H+W +GV ++FY LVP
Sbjct: 136 HLWSLGVEMQFYLLVP 151
>AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical
protein Y46G5A.1b protein.
Length = 1021
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 502 LILIYFDGESVRVFCCKYRSVSVPFHFRHELFVPGFP 612
L L+Y D E F ++ + P H H FVPGFP
Sbjct: 687 LFLMYLDEEDA--FWSLHQLMVSPKHTMHGFFVPGFP 721
>AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical
protein Y46G5A.1a protein.
Length = 1085
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 502 LILIYFDGESVRVFCCKYRSVSVPFHFRHELFVPGFP 612
L L+Y D E F ++ + P H H FVPGFP
Sbjct: 687 LFLMYLDEEDA--FWSLHQLMVSPKHTMHGFFVPGFP 721
>Z83118-1|CAB05575.1| 975|Caenorhabditis elegans Hypothetical
protein F56G4.1 protein.
Length = 975
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 215 STTSAIISHMWKMGVRIEFYRLVP 286
ST+ + H W +GV ++FY L P
Sbjct: 112 STSINLFIHTWSLGVEMQFYLLAP 135
>Z82283-4|CAB05286.1| 689|Caenorhabditis elegans Hypothetical
protein T23G4.4 protein.
Length = 689
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 215 STTSAIISHMWKMGVRIEFYRLVP 286
S S + +H W + V I+FY +VP
Sbjct: 134 SIASDLFTHTWSLSVEIQFYIIVP 157
>Z81552-6|CAB04489.1| 975|Caenorhabditis elegans Hypothetical
protein F56G4.1 protein.
Length = 975
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 215 STTSAIISHMWKMGVRIEFYRLVP 286
ST+ + H W +GV ++FY L P
Sbjct: 112 STSINLFIHTWSLGVEMQFYLLAP 135
>Z81066-1|CAB02970.1| 919|Caenorhabditis elegans Hypothetical
protein F17B5.2 protein.
Length = 919
Score = 28.7 bits (61), Expect = 4.2
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 230 IISHMWKMGVRIEFYRLVPRV 292
I +H W + V I+FY +VP +
Sbjct: 141 IFTHTWSLSVEIQFYLIVPSI 161
>U58753-4|AAC24435.2| 312|Caenorhabditis elegans Hypothetical
protein W03B1.7 protein.
Length = 312
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 230 IISHMWKMGVRIEFYRLVPRV 292
I +H W + V I+FY LVP +
Sbjct: 107 IFTHTWSLSVEIQFYFLVPLI 127
>Z92830-7|CAB07360.1| 659|Caenorhabditis elegans Hypothetical
protein F11A5.8 protein.
Length = 659
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 239 HMWKMGVRIEFYRLVPRV 292
H W +GV ++FY LVP +
Sbjct: 136 HTWSLGVEMQFYLLVPLI 153
>Z81492-4|CAB04031.1| 624|Caenorhabditis elegans Hypothetical
protein E03H4.7 protein.
Length = 624
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 230 IISHMWKMGVRIEFYRLVPRV 292
I +H W + V ++FY LVP V
Sbjct: 135 IFTHTWSLSVEVQFYFLVPVV 155
>AF036705-10|AAB95167.2| 612|Caenorhabditis elegans Hypothetical
protein F37C4.1 protein.
Length = 612
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 230 IISHMWKMGVRIEFYRLVP 286
I +H W + V I+FY LVP
Sbjct: 139 IFTHTWSLSVEIQFYFLVP 157
>AF036705-9|AAO91724.1| 686|Caenorhabditis elegans Hypothetical
protein F37C4.2 protein.
Length = 686
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 230 IISHMWKMGVRIEFYRLVP 286
I +H W + V I+FY LVP
Sbjct: 139 IFTHTWSLSVEIQFYFLVP 157
>AF036705-8|AAB95169.1| 685|Caenorhabditis elegans Hypothetical
protein F37C4.3 protein.
Length = 685
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 230 IISHMWKMGVRIEFYRLVP 286
I +H W + V I+FY LVP
Sbjct: 137 IFTHTWSLSVEIQFYFLVP 155
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -1
Query: 634 HLLLSTRKENPVQTIRDENGKVLTHFGIYNKKREQILHQNRLKLGLLDDD 485
H L +T + D ++LT F NKK +++L + + K+ L+DD
Sbjct: 60 HQLYNTHYVEYQVEMSDGTEEMLTEFDFDNKKTQKMLAEYKFKVTELEDD 109
>Z98851-5|CAB11541.1| 596|Caenorhabditis elegans Hypothetical
protein H12I19.5b protein.
Length = 596
Score = 27.9 bits (59), Expect = 7.4
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +2
Query: 215 STTSAIISHMWKMGVRIEFYRLVPRV 292
S + I +H W + V ++FY ++P +
Sbjct: 131 SYATDIFTHTWSLSVEVQFYLIIPLI 156
>Z98851-4|CAB11542.1| 607|Caenorhabditis elegans Hypothetical
protein H12I19.5a protein.
Length = 607
Score = 27.9 bits (59), Expect = 7.4
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +2
Query: 215 STTSAIISHMWKMGVRIEFYRLVPRV 292
S + I +H W + V ++FY ++P +
Sbjct: 131 SYATDIFTHTWSLSVEVQFYLIIPLI 156
>Z98851-3|CAB11538.2| 659|Caenorhabditis elegans Hypothetical
protein H12I19.4 protein.
Length = 659
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 239 HMWKMGVRIEFYRLVP 286
H W +GV ++FY LVP
Sbjct: 136 HTWSLGVEMQFYLLVP 151
>Z82055-10|CAB04848.2| 659|Caenorhabditis elegans Hypothetical
protein T26H2.7 protein.
Length = 659
Score = 27.9 bits (59), Expect = 7.4
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 230 IISHMWKMGVRIEFYRLVP 286
I +H W + V ++FY L+P
Sbjct: 136 IFTHTWSLSVEVQFYLLIP 154
>Z81595-2|CAB04749.1| 527|Caenorhabditis elegans Hypothetical
protein T22H2.2 protein.
Length = 527
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 230 IISHMWKMGVRIEFYRLVP 286
I +H W + V I+FY L+P
Sbjct: 94 IFTHTWSLSVEIQFYFLIP 112
>Z81537-4|CAB04375.2| 669|Caenorhabditis elegans Hypothetical
protein F41D3.4 protein.
Length = 669
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 230 IISHMWKMGVRIEFYRLVP 286
I +H W + V ++FY LVP
Sbjct: 136 IFTHTWSLSVEVQFYVLVP 154
>Z81537-2|CAB04373.1| 682|Caenorhabditis elegans Hypothetical
protein F41D3.2 protein.
Length = 682
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 230 IISHMWKMGVRIEFYRLVP 286
I +H W + V ++FY LVP
Sbjct: 140 IFTHTWSLSVEVQFYILVP 158
>Z81528-6|CAB04285.1| 633|Caenorhabditis elegans Hypothetical
protein F35E2.7 protein.
Length = 633
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 230 IISHMWKMGVRIEFYRLVP 286
I +H W + V I+FY L+P
Sbjct: 138 IFTHTWSLSVEIQFYILIP 156
>Z81502-5|CAB04108.2| 672|Caenorhabditis elegans Hypothetical
protein F14B6.5 protein.
Length = 672
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 230 IISHMWKMGVRIEFYRLVP 286
I +H W + V ++FY LVP
Sbjct: 137 IFTHTWSLSVEVQFYFLVP 155
>Z81455-3|CAB03808.2| 890|Caenorhabditis elegans Hypothetical
protein B0399.2 protein.
Length = 890
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 239 HMWKMGVRIEFYRLVP 286
H W +GV ++FY LVP
Sbjct: 136 HTWSLGVEMQFYLLVP 151
>Z81147-5|CAB03534.1| 663|Caenorhabditis elegans Hypothetical
protein T09E11.7 protein.
Length = 663
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 230 IISHMWKMGVRIEFYRLVPRV 292
I +H W + V ++FY +VP V
Sbjct: 137 IFTHTWSLSVEVQFYLIVPVV 157
>U80436-7|AAC71109.1| 1638|Caenorhabditis elegans Uncoordinated
protein 73, isoform b protein.
Length = 1638
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 271 EFDSDTHLPHVTDDCTGCT 215
+ +S+ H P VTD C GCT
Sbjct: 957 QLESEYHSPTVTDWCAGCT 975
>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
protein 73, isoform f protein.
Length = 2140
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 271 EFDSDTHLPHVTDDCTGCT 215
+ +S+ H P VTD C GCT
Sbjct: 957 QLESEYHSPTVTDWCAGCT 975
>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
protein 73, isoform a protein.
Length = 2488
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 271 EFDSDTHLPHVTDDCTGCT 215
+ +S+ H P VTD C GCT
Sbjct: 957 QLESEYHSPTVTDWCAGCT 975
>L14324-3|AAA28185.1| 851|Caenorhabditis elegans Abnormal nucleoli
protein 1 protein.
Length = 851
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 586 DENGKVLTHFGIYNKKREQILHQNRLKLGLLDDDCVVDNRS 464
D+ G+ FG K+ Q+L+ NR+ + D VV RS
Sbjct: 614 DKEGRFKFQFGECGKRDGQLLYPNRVAVNRTTGDFVVTERS 654
>CU457741-7|CAM36348.1| 710|Caenorhabditis elegans Hypothetical
protein C42C1.7 protein.
Length = 710
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 230 IISHMWKMGVRIEFYRLVPRVCTRHVAFSAI 322
I +H W + V I+FY +VP + FS++
Sbjct: 138 IFTHTWSLSVEIQFYFVVPFIFLIGNLFSSV 168
>AL032623-19|CAA21519.2| 890|Caenorhabditis elegans Hypothetical
protein B0399.2 protein.
Length = 890
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 239 HMWKMGVRIEFYRLVP 286
H W +GV ++FY LVP
Sbjct: 136 HTWSLGVEMQFYLLVP 151
>AF048835-1|AAC12932.1| 1638|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73B protein.
Length = 1638
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 271 EFDSDTHLPHVTDDCTGCT 215
+ +S+ H P VTD C GCT
Sbjct: 957 QLESEYHSPTVTDWCAGCT 975
>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73A protein.
Length = 2488
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 271 EFDSDTHLPHVTDDCTGCT 215
+ +S+ H P VTD C GCT
Sbjct: 957 QLESEYHSPTVTDWCAGCT 975
>AF047027-1|AAC14263.1| 851|Caenorhabditis elegans B box zinc
finger protein Ncl-1 protein.
Length = 851
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 586 DENGKVLTHFGIYNKKREQILHQNRLKLGLLDDDCVVDNRS 464
D+ G+ FG K+ Q+L+ NR+ + D VV RS
Sbjct: 614 DKEGRFKFQFGECGKRDGQLLYPNRVAVNRTTGDFVVTERS 654
>AF016654-1|AAB66028.1| 731|Caenorhabditis elegans Hypothetical
protein C17A2.5 protein.
Length = 731
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 230 IISHMWKMGVRIEFYRLVP 286
I +H W + V ++FY LVP
Sbjct: 153 IFTHTWSLSVEVQFYCLVP 171
>Z81553-10|CAB04501.2| 668|Caenorhabditis elegans Hypothetical
protein F56H6.12 protein.
Length = 668
Score = 27.5 bits (58), Expect = 9.8
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 230 IISHMWKMGVRIEFYRLVP 286
I +H W + V ++FY +VP
Sbjct: 132 IFTHTWSLSVEVQFYLIVP 150
>Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical
protein F56H6.11 protein.
Length = 663
Score = 27.5 bits (58), Expect = 9.8
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 230 IISHMWKMGVRIEFYRLVP 286
I +H W + V ++FY +VP
Sbjct: 132 IFTHTWSLSVEVQFYLIVP 150
>Z81528-5|CAB04287.1| 698|Caenorhabditis elegans Hypothetical
protein F35E2.6 protein.
Length = 698
Score = 27.5 bits (58), Expect = 9.8
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 230 IISHMWKMGVRIEFYRLVP 286
I +H W + V ++FY L+P
Sbjct: 140 IFTHTWSLSVEVQFYFLIP 158
>Z81467-3|CAC42255.1| 1143|Caenorhabditis elegans Hypothetical
protein C12C8.3b protein.
Length = 1143
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 198 HTDKHRVQPV-QSSVTCGRWVSESNSIAWYPE 290
H KHRVQP+ V G V+ES + W E
Sbjct: 503 HPGKHRVQPLGDIRVAVGEVVNESQLLQWQCE 534
>Z81467-2|CAC42254.1| 1147|Caenorhabditis elegans Hypothetical
protein C12C8.3a protein.
Length = 1147
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 198 HTDKHRVQPV-QSSVTCGRWVSESNSIAWYPE 290
H KHRVQP+ V G V+ES + W E
Sbjct: 507 HPGKHRVQPLGDIRVAVGEVVNESQLLQWQCE 538
>Z81147-10|CAB03533.3| 671|Caenorhabditis elegans Hypothetical
protein T09E11.4 protein.
Length = 671
Score = 27.5 bits (58), Expect = 9.8
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 230 IISHMWKMGVRIEFYRLVP 286
I +H W + V ++FY +VP
Sbjct: 137 IFTHTWSLSVEVQFYLIVP 155
>AF195611-1|AAF15530.1| 1147|Caenorhabditis elegans LIN-41B protein.
Length = 1147
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 198 HTDKHRVQPV-QSSVTCGRWVSESNSIAWYPE 290
H KHRVQP+ V G V+ES + W E
Sbjct: 507 HPGKHRVQPLGDIRVAVGEVVNESQLLQWQCE 538
>AF195610-1|AAF15529.1| 1143|Caenorhabditis elegans LIN-41A protein.
Length = 1143
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 198 HTDKHRVQPV-QSSVTCGRWVSESNSIAWYPE 290
H KHRVQP+ V G V+ES + W E
Sbjct: 503 HPGKHRVQPLGDIRVAVGEVVNESQLLQWQCE 534
>AF016424-1|AAB65331.2| 617|Caenorhabditis elegans Hypothetical
protein F39G3.6 protein.
Length = 617
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 230 IISHMWKMGVRIEFYRLVP 286
I H+W + V ++FY LVP
Sbjct: 145 IFVHLWSLSVEMQFYLLVP 163
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,197,469
Number of Sequences: 27780
Number of extensions: 379127
Number of successful extensions: 1085
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -