Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1382
         (393 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC015016-1|AAH15016.3|  775|Homo sapiens C14orf103 protein protein.    31   1.8  
AK128275-1|BAC87363.1|  909|Homo sapiens protein ( Homo sapiens ...    31   1.8  
AK001104-1|BAA91504.1|  662|Homo sapiens protein ( Homo sapiens ...    31   1.8  
BC038106-1|AAH38106.1|  324|Homo sapiens UBXD5 protein protein.        29   7.2  

>BC015016-1|AAH15016.3|  775|Homo sapiens C14orf103 protein protein.
          Length = 775

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +2

Query: 38  HLFKELTIVW*IFVQTSSGWVPPRTPQRTDNFVHRRPLYRSSSV*LNNVC 187
           ++ KE+++VW ++     G VPP +P ++    H  P +  +    N VC
Sbjct: 245 YVVKEVSLVWHLYGGKDFGTVPPTSPAKSYISPHSSPSHTPTRHGRNTVC 294


>AK128275-1|BAC87363.1|  909|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46412 fis, clone THYMU3011534. ).
          Length = 909

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +2

Query: 38  HLFKELTIVW*IFVQTSSGWVPPRTPQRTDNFVHRRPLYRSSSV*LNNVC 187
           ++ KE+++VW ++     G VPP +P ++    H  P +  +    N VC
Sbjct: 379 YVVKEVSLVWHLYGGKDFGTVPPTSPAKSYISPHSSPSHTPTRHGRNTVC 428


>AK001104-1|BAA91504.1|  662|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10242 fis, clone HEMBB1000630. ).
          Length = 662

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +2

Query: 38  HLFKELTIVW*IFVQTSSGWVPPRTPQRTDNFVHRRPLYRSSSV*LNNVC 187
           ++ KE+++VW ++     G VPP +P ++    H  P +  +    N VC
Sbjct: 132 YVVKEVSLVWHLYGGKDFGTVPPTSPAKSYISPHSSPSHTPTRHGRNTVC 181


>BC038106-1|AAH38106.1|  324|Homo sapiens UBXD5 protein protein.
          Length = 324

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +3

Query: 78  YRPAQGGCLRELHNGRIISFIDDLYIEVVPFN*TTCAS 191
           Y P+   CLR++ +G   S +  LY   VPF   +C+S
Sbjct: 253 YDPSTQRCLRDILDGFFPSELQRLYPNGVPFKVISCSS 290


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,196,659
Number of Sequences: 237096
Number of extensions: 514783
Number of successful extensions: 778
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)