Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1377
(720 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0477 + 19503678-19503803,19504381-19504422,19504631-195046... 96 3e-20
07_03_1141 - 24264534-24264635,24265542-24265616,24265709-242657... 94 9e-20
03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648... 94 9e-20
07_01_0093 + 702223-702348,703434-703556,703646-703702,703797-70... 93 3e-19
07_01_0904 + 7609863-7610198,7610320-7610415,7610564-7610659 54 9e-08
02_05_0250 + 27153048-27154453,27154546-27154885 31 0.70
07_03_0434 + 18175560-18175695,18176068-18176177,18176553-181766... 31 1.2
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 29 3.7
08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695 29 3.7
08_01_0409 + 3625071-3625228,3625829-3625905,3626310-3626889,362... 29 3.7
05_01_0297 - 2314687-2316021 29 4.9
08_02_0311 - 15635165-15635590,15635777-15638698 28 6.5
06_02_0225 + 13257655-13260693 28 6.5
09_02_0601 + 11112201-11112386,11112471-11114080,11114345-111145... 28 8.6
07_01_0200 + 1433859-1434377 28 8.6
07_01_0196 + 1400708-1401226 28 8.6
07_01_0192 + 1367558-1368076 28 8.6
07_01_0188 + 1334405-1334923 28 8.6
06_03_0827 - 25122413-25122430,25122970-25123063,25124210-25124535 28 8.6
04_02_0026 + 8708765-8710935,8711021-8711272,8711353-8711463,871... 28 8.6
>12_02_0477 +
19503678-19503803,19504381-19504422,19504631-19504684,
19504946-19505068,19505154-19505210,19505299-19505373,
19505925-19506026
Length = 192
Score = 95.9 bits (228), Expect = 3e-20
Identities = 47/109 (43%), Positives = 75/109 (68%), Gaps = 2/109 (1%)
Frame = -1
Query: 720 SKTGK-GTATVKFTWLGLISSMVKSMKISVPPPHNMDVPHVKREDYQLTDISDDGYLTLM 544
SKTGK G A F + + ++ K ++ VP HN DVPHV R +YQL DIS+DG+++L+
Sbjct: 81 SKTGKHGHAKCHFVAIDIFTA--KKLEDIVPSSHNCDVPHVNRTEYQLIDISEDGFVSLL 138
Query: 543 ADNGDLREDLKIP-DGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVK 400
+NG+ ++DL++P D +L +Q++ F GK+L+ TV+ + GEE + A+K
Sbjct: 139 TENGNTKDDLRLPTDDNLLSQIKDGFGEGKDLVVTVMSAMGEEQICALK 187
>07_03_1141 -
24264534-24264635,24265542-24265616,24265709-24265765,
24265903-24266025,24266509-24266520,24267014-24267157,
24267606-24267626
Length = 177
Score = 94.3 bits (224), Expect = 9e-20
Identities = 47/109 (43%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Frame = -1
Query: 720 SKTGK-GTATVKFTWLGLISSMVKSMKISVPPPHNMDVPHVKREDYQLTDISDDGYLTLM 544
SKTGK G A F + + + K ++ VP HN DVPHV R +YQL DIS+DG+++L+
Sbjct: 66 SKTGKHGHAKCHFVAIDIFNG--KKLEDIVPSSHNCDVPHVNRTEYQLIDISEDGFVSLL 123
Query: 543 ADNGDLREDLKIP-DGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVK 400
++G+ ++DL++P D L Q++T F GK+L+ TV+ + GEE + A+K
Sbjct: 124 TESGNTKDDLRLPTDDSLLGQIKTGFGEGKDLVVTVMSAMGEEQICALK 172
>03_06_0030 + 31161821-31161927,31163700-31163934,31164064-31164826,
31165816-31167650,31169294-31169424,31169993-31170075,
31170426-31170680,31171125-31171220,31171695-31171775,
31171811-31171968,31172434-31172534,31172614-31172629,
31173390-31173439,31174558-31174588,31175156-31175305,
31176135-31176173,31176288-31176410,31176496-31176552,
31176837-31176911,31177003-31177107
Length = 1496
Score = 94.3 bits (224), Expect = 9e-20
Identities = 48/109 (44%), Positives = 72/109 (66%), Gaps = 2/109 (1%)
Frame = -1
Query: 720 SKTGK-GTATVKFTWLGLISSMVKSMKISVPPPHNMDVPHVKREDYQLTDISDDGYLTLM 544
SKTGK G A F + + + K ++ VP HN DVPHV R DYQL DIS+DG+++L+
Sbjct: 1384 SKTGKHGHAKCHFVAIDIFNG--KKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLL 1441
Query: 543 ADNGDLREDLKIP-DGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVK 400
++G ++DL++P D L TQ++ F GK+L+ TV+ + GEE + A+K
Sbjct: 1442 TESGGTKDDLRLPSDEALLTQIKDGFAEGKDLIVTVMSAMGEEQICALK 1490
>07_01_0093 +
702223-702348,703434-703556,703646-703702,703797-703871,
704105-704212
Length = 162
Score = 92.7 bits (220), Expect = 3e-19
Identities = 47/110 (42%), Positives = 73/110 (66%), Gaps = 3/110 (2%)
Frame = -1
Query: 720 SKTGK-GTATVKFTWLGLISSMVKSMKISVPPPHNMDVPHVKREDYQLTDISDDGYLTLM 544
SKTGK G A F + + + K ++ VP HN DVPHV R DYQL DIS+DG+++L+
Sbjct: 49 SKTGKHGHAKCHFVGIDIFNG--KKLEDIVPSSHNCDVPHVDRTDYQLIDISEDGFVSLL 106
Query: 543 ADNGDLREDLKIP-DGDLGTQLRTDF-DSGKELLCTVLKSCGEECVIAVK 400
++G+ ++DL++P D L Q++ F + GK+++ TV+ + GEE + AVK
Sbjct: 107 TESGNTKDDLRLPTDDTLTNQIKNGFGEEGKDMILTVMSAMGEEQICAVK 156
>07_01_0904 + 7609863-7610198,7610320-7610415,7610564-7610659
Length = 175
Score = 54.4 bits (125), Expect = 9e-08
Identities = 25/63 (39%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Frame = -1
Query: 606 HVKREDYQLTDISDDG-YLTLMADNGDLREDLKIPDGD-LGTQLRTDFDSGKELLCTVLK 433
H+ R +YQL DIS+DG +++L+ ++G+ ++DL +P D L Q++T F GK+++ TV+
Sbjct: 46 HMNRTNYQLIDISEDGLFVSLLTESGNTKDDLGLPTYDNLLGQIKTGFGEGKDVVVTVMS 105
Query: 432 SCG 424
+ G
Sbjct: 106 AMG 108
>02_05_0250 + 27153048-27154453,27154546-27154885
Length = 581
Score = 31.5 bits (68), Expect = 0.70
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = -1
Query: 543 ADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKANTA 388
A GD DL IPD + TQ+ T+ S C V S G C AV A+ +
Sbjct: 248 ASTGDRSVDLPIPDNETNTQI-TEMRSNGAEKCDVQLSGGTLCSEAVPASNS 298
>07_03_0434 +
18175560-18175695,18176068-18176177,18176553-18176616,
18176839-18176915,18177152-18177223,18178337-18178456
Length = 192
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = -1
Query: 615 DVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGD 496
D P+ RE +++ ++ D Y+T D+G L ED+K+ G+
Sbjct: 38 DFPNFIREGFEVKVVTSDNYIT--RDSGLLYEDIKVGTGN 75
>12_01_1024 -
10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 537 NGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCGEECVIAVKAN 394
N D D I G GTQ D +L +VLKS + CV A KA+
Sbjct: 730 NRDTDIDHFIELGKSGTQCSGYLDLVDDLTTSVLKSSSDTCVSAAKAS 777
>08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695
Length = 664
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 507 PDGDLGTQLRTDFDSGKELLCTVLKSCGE 421
PDGDL ++R +SGKEL L G+
Sbjct: 206 PDGDLKDKMRDAMESGKELTSNALALIGK 234
>08_01_0409 +
3625071-3625228,3625829-3625905,3626310-3626889,
3626974-3627111,3627318-3627387,3627449-3627933,
3628681-3628890,3629259-3629326,3629855-3629961,
3630275-3630346,3630448-3630614,3630709-3630820,
3631464-3631650,3632174-3632286
Length = 847
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 605 WGTSMLCGGGTDIFILF 655
W S+LCGG T IFI F
Sbjct: 501 WWRSVLCGGSTGIFIFF 517
>05_01_0297 - 2314687-2316021
Length = 444
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = -1
Query: 582 LTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTVLKSCG 424
+ D + +G L + AD D+R + DGD G +LR F S +LL V S G
Sbjct: 91 VVDCTGEGVLFVEAD-ADVRLEELEEDGDGGGELRPPFPSMDQLLLDVEGSGG 142
>08_02_0311 - 15635165-15635590,15635777-15638698
Length = 1115
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 717 KTGKGTATVKFTWLGLISSMVKSMKISVPPP 625
+ GK T T+ F W GL+S V + +++ PP
Sbjct: 1070 RRGK-TPTIVFVWSGLLSITVSLLWVAISPP 1099
>06_02_0225 + 13257655-13260693
Length = 1012
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 702 TATVKFTWLGLISSMVKSMKISVPPP 625
T T+ + W GLIS V + I++ PP
Sbjct: 976 TPTIVYVWAGLISITVSLLWITISPP 1001
>09_02_0601 +
11112201-11112386,11112471-11114080,11114345-11114579,
11115233-11115358
Length = 718
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -3
Query: 226 PPR*RHSQYLTPLTSPTRSVVSPPAP 149
PP RH PL SP R PP+P
Sbjct: 419 PPSPRHPSSPPPLRSPPRQPTPPPSP 444
>07_01_0200 + 1433859-1434377
Length = 172
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +2
Query: 371 LVYLSRAVFALTAMT---HSSPQDFSTVHNNS 457
LV L+ A A+ A T SSPQDF HN++
Sbjct: 8 LVLLAAATLAMAASTAAAQSSPQDFVDAHNDA 39
>07_01_0196 + 1400708-1401226
Length = 172
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +2
Query: 371 LVYLSRAVFALTAMT---HSSPQDFSTVHNNS 457
LV L+ A A+ A T SSPQDF HN++
Sbjct: 8 LVLLAAATLAMAASTAAAQSSPQDFVDAHNDA 39
>07_01_0192 + 1367558-1368076
Length = 172
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +2
Query: 371 LVYLSRAVFALTAMT---HSSPQDFSTVHNNS 457
LV L+ A A+ A T SSPQDF HN++
Sbjct: 8 LVLLAAATLAMAASTAAAQSSPQDFVDAHNDA 39
>07_01_0188 + 1334405-1334923
Length = 172
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +2
Query: 371 LVYLSRAVFALTAMT---HSSPQDFSTVHNNS 457
LV L+ A A+ A T SSPQDF HN++
Sbjct: 8 LVLLAAATLAMAASTAAAQSSPQDFVDAHNDA 39
>06_03_0827 - 25122413-25122430,25122970-25123063,25124210-25124535
Length = 145
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +2
Query: 137 GKYYGSWGRDYGTRRRSEGGEVLRVTSARGRRFRGLRAPP 256
G+ S G + G RRR G EV RG R +PP
Sbjct: 65 GERAASGGEEQGRRRRRAGNEVAGRPEGRGGAGRRCASPP 104
>04_02_0026 +
8708765-8710935,8711021-8711272,8711353-8711463,
8711553-8711634,8711909-8712100
Length = 935
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -3
Query: 226 PPR*RHSQYLTPLTSPTRSVVSPPAP 149
PP RH PL SP R PP+P
Sbjct: 489 PPSPRHQPSPPPLRSPPRQPTPPPSP 514
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,756,939
Number of Sequences: 37544
Number of extensions: 401982
Number of successful extensions: 1359
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1351
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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