Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1375
(700 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP35G2.08c |air1||zinc knuckle TRAMP complex subunit Air1|Schi... 38 0.001
SPAC13D6.02c |byr3||zinc finger protein Byr3|Schizosaccharomyces... 34 0.017
SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces... 33 0.052
SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces pom... 29 0.85
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 28 1.1
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 28 1.5
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 28 1.5
SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomy... 27 2.0
SPBC646.06c |agn2||glucan endo-1,3-alpha-glucosidase Agn2|Schizo... 27 2.6
SPCC31H12.03c |||transcriptional regulator|Schizosaccharomyces p... 27 2.6
SPCC1682.03c |mug174||meiotically upregulated gene Mug174|Schizo... 27 2.6
SPBC428.05c |arg12||argininosuccinate synthase |Schizosaccharomy... 27 3.4
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 27 3.4
SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10 |... 26 4.5
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 26 4.5
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 26 4.5
SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces po... 26 4.5
SPBC3E7.05c |||conserved eukaryotic protein|Schizosaccharomyces ... 26 4.5
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 26 4.5
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 26 4.5
SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual 26 6.0
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 26 6.0
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 26 6.0
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 26 6.0
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 26 6.0
>SPBP35G2.08c |air1||zinc knuckle TRAMP complex subunit
Air1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 313
Score = 37.9 bits (84), Expect = 0.001
Identities = 19/63 (30%), Positives = 24/63 (38%)
Frame = -3
Query: 659 CXMCGXMGHFDPRWPRKICVNCGXPNHIYSTMCXNCSSWNSLKCAECGQXGHPXSHCXDM 480
C C GH P +C CG + S C W KC CG GH + C +
Sbjct: 89 CHNCKGNGHISKDCPHVLCTTCGAIDDHISVRC----PWTK-KCMNCGLLGHIAARCSEP 143
Query: 479 WRR 471
+R
Sbjct: 144 RKR 146
>SPAC13D6.02c |byr3||zinc finger protein Byr3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 179
Score = 34.3 bits (75), Expect = 0.017
Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Frame = -3
Query: 698 GHKEDTCHMKPAXCXMCGXMGH-----FDPRWPRKICVNCGXPNHIYSTMCXNCSSWNSL 534
GH+ C K + C C GH +P+ K C CG H+ + +
Sbjct: 26 GHQAREC-TKGSICYNCNQTGHKASECTEPQ-QEKTCYACGTAGHLVRDCPSSPNPRQGA 83
Query: 533 KCAECGQXGHPXSHC 489
+C +CG+ GH C
Sbjct: 84 ECYKCGRVGHIARDC 98
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = -3
Query: 617 PRKICVNCGXPNHIYSTMCXNCSSWNSLKCAECGQXGHPXSHCXD 483
P C NCG H C+ + C C Q GH S C +
Sbjct: 15 PGPRCYNCGENGH----QARECTKGSI--CYNCNQTGHKASECTE 53
Score = 25.8 bits (54), Expect = 6.0
Identities = 24/85 (28%), Positives = 29/85 (34%), Gaps = 15/85 (17%)
Frame = -3
Query: 698 GHKEDTCHMKP-----AXCXMCGXMGHFDPRWPRKICVNCGXP--NHIYSTMCXNCSSWN 540
GH C P A C CG +GH R R G H + C C S+
Sbjct: 67 GHLVRDCPSSPNPRQGAECYKCGRVGHI-ARDCRTNGQQSGGRFGGHRSNMNCYACGSYG 125
Query: 539 --------SLKCAECGQXGHPXSHC 489
+KC CG+ GH C
Sbjct: 126 HQARDCTMGVKCYSCGKIGHRSFEC 150
>SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 745
Score = 32.7 bits (71), Expect = 0.052
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = -2
Query: 255 RNKQIQDKNTSQDSTASSERTPRNDRKRQSKSX-TAHESHVNKKRNLSTSDDTEMRRNTK 79
++ + + K + S+ S E R+ KR S S TA SH+ +NL + + ++++N
Sbjct: 423 KDAKAERKKSGLSSSTSEESLNRHISKRSSNSNDTAPSSHIIADKNLEPTSNIQLKKNPD 482
Query: 78 SPIANTPQ 55
+ T +
Sbjct: 483 GNLVETSE 490
>SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1325
Score = 28.7 bits (61), Expect = 0.85
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = -2
Query: 252 NKQIQDKNTSQDSTASSERTPRNDRKRQSKSXTAHESHVNKKRNLSTSDDTEMRRNTKSP 73
N++ ++ N ++ + + K + K+ A+ S +NK N TSD + + KSP
Sbjct: 783 NEKAEESNETKGFNTTIAKQNDKSSKSEGKASVANMSALNKSTNNETSDS---KPSLKSP 839
Query: 72 IAN 64
+ N
Sbjct: 840 LFN 842
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1052
Score = 28.3 bits (60), Expect = 1.1
Identities = 17/70 (24%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = -2
Query: 255 RNKQIQDKNTSQDSTASSERTPRNDRKRQSKSXTAHESHVNKK-RNLSTSDDTEMRRNTK 79
+N Q++D+ + S + S +DRK S++ A + ++N++ N +++D +E +N +
Sbjct: 605 QNLQLEDEISEISSPSYSSD---DDRKTISETQPAPKQNINEEFENSTSTDGSETNKNEQ 661
Query: 78 SPIANTPQRK 49
+TP +
Sbjct: 662 GNSLSTPDNE 671
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 27.9 bits (59), Expect = 1.5
Identities = 14/62 (22%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Frame = -2
Query: 270 KQNNLRNKQI--QDKNTSQDSTASSERTPRNDRKRQSKSXTAHESHVN--KKRNLSTSDD 103
++N L + ++ QD ++S++ ++ E ++ + + + ES V KK+ ++ S+D
Sbjct: 21 EENRLTSSRLKKQDDSSSEEESSEEESASSSESESSEEESESEESEVEVPKKKAVAASED 80
Query: 102 TE 97
+E
Sbjct: 81 SE 82
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 27.9 bits (59), Expect = 1.5
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = -2
Query: 231 NTSQDSTASSERTPRNDRKRQSKSXTAHESHVNKKRNLSTSDDTEMRRNTK--SPIANTP 58
N+S S +SS + PR RKR H S + S + R+ K SP +P
Sbjct: 51 NSSSISPSSSAKDPREQRKRTFPLNDTHSSRARQHERPFRSRKSRRRKGKKAFSPRPGSP 110
>SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 278
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = -2
Query: 255 RNKQIQDKNTSQDSTASSERTPRNDRKRQSKSXTAHESHVNKKRNLSTSDD 103
++K+ K +STAS +D+K + K + + +KK++ T+D+
Sbjct: 227 KSKKKPKKTPVSNSTASQASENASDKKTKEKKSSGKQKIASKKKDQLTTDN 277
>SPBC646.06c |agn2||glucan endo-1,3-alpha-glucosidase
Agn2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 433
Score = 27.1 bits (57), Expect = 2.6
Identities = 18/76 (23%), Positives = 32/76 (42%)
Frame = -2
Query: 336 PVSRSNSPYVCMYRAIYPPTPGKQNNLRNKQIQDKNTSQDSTASSERTPRNDRKRQSKSX 157
P+S S ++ MY+ P + + + + S+++TASS+ PR D + S
Sbjct: 285 PLSYSLPLFIQMYKQNTTGLPSNFSGISQLYVTYRVHSKNATASSDSIPRPDNYQNSSDV 344
Query: 156 TAHESHVNKKRNLSTS 109
+ S L S
Sbjct: 345 ISVISFAKSSYTLRVS 360
>SPCC31H12.03c |||transcriptional regulator|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 27.1 bits (57), Expect = 2.6
Identities = 11/50 (22%), Positives = 26/50 (52%)
Frame = -2
Query: 174 RQSKSXTAHESHVNKKRNLSTSDDTEMRRNTKSPIANTPQRKISQSIEDP 25
+Q + + +++H K + S+ +RN +P + P ++ S ++DP
Sbjct: 177 QQPLASSNNKNHNQSKNPQNRSNSRSKQRNKNAPPKSAPSKRKSNILDDP 226
>SPCC1682.03c |mug174||meiotically upregulated gene
Mug174|Schizosaccharomyces pombe|chr 3|||Manual
Length = 626
Score = 27.1 bits (57), Expect = 2.6
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = -2
Query: 252 NKQIQDKNTSQDSTASSERTPRNDRK-RQSKSXTAHESHVNKKRNLSTSDDTEMRRNTKS 76
+K + K + + S E + D R S A++S ++KKRN S ++ ++
Sbjct: 133 SKFMNSKASQKQQMLSPETMQKVDLAGRASPRYQANDSWISKKRNAPLSSISQYANMPEN 192
Query: 75 PIANTPQRKIS 43
NT + KIS
Sbjct: 193 YALNTKKSKIS 203
>SPBC428.05c |arg12||argininosuccinate synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 410
Score = 26.6 bits (56), Expect = 3.4
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -3
Query: 698 GHKEDTCHMKPAXCXMCGXMGHFDPRW 618
G K DT H+ +G FDP W
Sbjct: 362 GRKSDTAHLYDEKLSSMDELGGFDPTW 388
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 26.6 bits (56), Expect = 3.4
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = -2
Query: 414 NTISCSAAGARA-----AVTSSTRVETPYPXPVSRSNSPYVCMYRAIYPPTPGKQ 265
N SA+ ARA + SST P P V S SP+V PP P ++
Sbjct: 122 NVTVISASPARAIEQQPTILSSTDSNIPRPGTVKSSASPFVPNQNPSAPPPPPQE 176
>SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 791
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = -2
Query: 246 QIQDKNTSQDSTASSERTPRNDRKRQSKSXTAHESHVNKKRNLSTSDDTEMRRNTKSPIA 67
Q+ DK+ D ++E TP ++ K + + + + + +D E +N KS IA
Sbjct: 393 QVIDKSVCDDECTNTENTPSSNIPADVKDSLSADDYAYDTKRKTQIEDLEEDQN-KSKIA 451
Query: 66 N 64
+
Sbjct: 452 S 452
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 26.2 bits (55), Expect = 4.5
Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Frame = -2
Query: 369 SSTRVETPYPXPVSRSNSPYVCMYRAIYPPTPGKQNNLRNKQ-IQDKNTSQDSTASSERT 193
S+ + TP P+ R P + ++ TP K +L++++ IQ + +ASS
Sbjct: 329 SAVDLTTPSSPPIPRHTKPKLSTTQS----TPVKPASLQSEEDIQLSFKQPELSASSAEL 384
Query: 192 PRNDRKRQSKSXTAHESHVNKKRNLSTSDDTEMRRNTKSPIANTPQRKI 46
D K +S+ + N+S + +++ R+ SP+A+ RK+
Sbjct: 385 ---DEKLKSQCNVSPSPS-----NISDAPPSKLNRSYSSPLASISSRKV 425
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 280 DPGETKQFEEQTDSRQKYIPRFDCVFRTNSKERQ 179
+P KQ+EE T + FD + +TN+ ER+
Sbjct: 214 NPDSRKQYEETTSASLSAPGAFDALKQTNALERR 247
>SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1159
Score = 26.2 bits (55), Expect = 4.5
Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Frame = -2
Query: 372 TSSTRVETPYPXPVSRSNSPYVCMYRA----IYPPTPGKQNNLRNKQIQDKNTSQDSTAS 205
TSS V+ PY P S + + RA ++P T G +D+ + + T S
Sbjct: 10 TSSKTVKKPYDPPQGSSRPFFTVLKRAFSSVLHPFTSGLDEKASGTASKDRKSGRAGTKS 69
Query: 204 ---SERTPRNDRKRQSKSXTAHESHV 136
E TP K ++ SHV
Sbjct: 70 LLTPELTPHYLGKSPRIIRVSNRSHV 95
>SPBC3E7.05c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 550
Score = 26.2 bits (55), Expect = 4.5
Identities = 8/23 (34%), Positives = 20/23 (86%)
Frame = -2
Query: 150 HESHVNKKRNLSTSDDTEMRRNT 82
+ ++++KK+N S +DDT+++++T
Sbjct: 136 NSNNISKKQNSSRNDDTKVKKDT 158
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 26.2 bits (55), Expect = 4.5
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = -3
Query: 575 YSTMCXNCSSWNSLKCA-ECGQXGHPXSHCXDMWRRXXNHYR*RRAXXEVNADKETLSAV 399
Y+ + SS+ + E GQ GH + ++ R+ N + + EV +DK T S+
Sbjct: 572 YAELLSKVSSYRPSETVFEIGQRGHLKTEAAEIMRKRRNKVKPKGIKSEVASDKITDSSP 631
Query: 398 LQRVHAPRSXHPHVSKH 348
A S V K+
Sbjct: 632 GNMSEASESELEEVFKN 648
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 26.2 bits (55), Expect = 4.5
Identities = 21/84 (25%), Positives = 35/84 (41%)
Frame = -2
Query: 279 TPGKQNNLRNKQIQDKNTSQDSTASSERTPRNDRKRQSKSXTAHESHVNKKRNLSTSDDT 100
TP + NK I + + A +R +N R + +SH + +S SDD
Sbjct: 492 TPSTKAKTTNKVIISDVIIEATQAEPKRRQKNSRVVFDEEDLTGDSHGSSNMKISESDD- 550
Query: 99 EMRRNTKSPIANTPQRKISQSIED 28
+ I ++ R S+SI+D
Sbjct: 551 ---ESNGDMIRDSFDRLSSESIKD 571
>SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 25.8 bits (54), Expect = 6.0
Identities = 18/69 (26%), Positives = 35/69 (50%)
Frame = -2
Query: 255 RNKQIQDKNTSQDSTASSERTPRNDRKRQSKSXTAHESHVNKKRNLSTSDDTEMRRNTKS 76
+ K + + +QD+ + ++ R D K +HE + K LS+SD ++ ++TK
Sbjct: 139 KTKSLFHEREAQDAIETMKKMKR-DVKNSPIMKKSHEEDGDNKL-LSSSD--QLAKSTKH 194
Query: 75 PIANTPQRK 49
N+P +K
Sbjct: 195 AAKNSPSKK 203
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 25.8 bits (54), Expect = 6.0
Identities = 27/100 (27%), Positives = 36/100 (36%)
Frame = -2
Query: 396 AAGARAAVTSSTRVETPYPXPVSRSNSPYVCMYRAIYPPTPGKQNNLRNKQIQDKNTSQD 217
AA V S T T P S S+ P V P P + + N S
Sbjct: 170 AAVKNEYVLSPTSPTTSAAFPSSFSSLPLVSSKPTGTPFVP---KSPPSSSPSTTNVSNA 226
Query: 216 STASSERTPRNDRKRQSKSXTAHESHVNKKRNLSTSDDTE 97
ST+S+ PR + R+ + H +LS DTE
Sbjct: 227 STSSAPINPRAPQTRRESISSTSSIHYCSSSSLSYLHDTE 266
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = -2
Query: 228 TSQDSTASSERTPRNDRKRQSKSXTAHESHVNKKR 124
+ D S+E ND + S+ + ESH +K+
Sbjct: 81 SENDELESAESEAENDEESSSQKSNSKESHAQRKK 115
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 25.8 bits (54), Expect = 6.0
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 14/82 (17%)
Frame = -2
Query: 363 TRVETPYPXPVS----RSNSPYVCMYRAIYPPT-----PGKQNNLRNKQI-----QDKNT 226
TR+ TP P ++ S P + R I P P K N L++ Q+ Q +T
Sbjct: 606 TRIPTPIPSSLNVSLESSKKPEIFHERHIPTPETGPNKPSKNNILKSTQVPVTPKQKSST 665
Query: 225 SQDSTASSERTPRNDRKRQSKS 160
+ + SS P ++ K+ +S
Sbjct: 666 ANKGSTSSPSPPSSESKKTKRS 687
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 25.8 bits (54), Expect = 6.0
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = -2
Query: 264 NNLRNKQIQDKNTSQDSTASSERTPRNDRKRQSKSXTAHESHVNKKR 124
NNL+N+ K + + T + ER + Q + AHE + +R
Sbjct: 846 NNLQNQLESTKEVANELTITKERVLQLTNDLQEEQALAHEKDILVER 892
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,781,913
Number of Sequences: 5004
Number of extensions: 54611
Number of successful extensions: 240
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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