Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1375
(700 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0817 - 20792817-20793360,20794061-20794156,20795193-20795296 34 0.12
09_01_0019 + 403078-404211 33 0.29
05_06_0098 + 25560158-25560925 33 0.29
03_05_0211 - 22020515-22020687,22020801-22020831,22022060-220221... 32 0.38
10_08_0198 + 15688142-15690427,15690524-15690607,15691232-156913... 32 0.50
07_03_0363 + 17225472-17226778,17226910-17226917,17227313-172274... 32 0.50
05_01_0148 - 985745-986180,986290-986385,986498-986694,986824-98... 32 0.50
05_01_0112 - 757514-758444,758525-758571,759074-759236,759861-76... 32 0.50
04_03_1037 - 21901989-21902468,21903308-21903526,21903984-219041... 32 0.50
03_02_0609 - 9823120-9823573,9823903-9824102,9824240-9824335,982... 32 0.50
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 31 0.67
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 31 0.88
03_05_0179 - 21583234-21584336,21586274-21586358,21586665-215867... 31 0.88
05_05_0267 - 23704249-23704401,23704476-23704780,23704967-237056... 31 1.2
08_02_1242 - 25513665-25513997,25514184-25514257,25514317-255144... 30 1.5
02_01_0302 - 2021221-2023305 30 2.0
12_01_1113 - 11888691-11888900,11891794-11892243,11892274-118929... 29 2.7
11_06_0610 - 25449085-25453284 29 3.5
11_03_0149 + 10787332-10787454,10787776-10788529,10790406-107904... 29 3.5
05_01_0455 - 3614011-3614503,3615007-3615072,3615154-3615347,361... 29 3.5
05_01_0084 + 562119-562411,562854-562902,563151-563162,563194-56... 29 4.7
04_04_1079 - 30663919-30665044,30665143-30665298,30665405-306655... 29 4.7
04_04_0844 - 28637393-28638118,28638206-28638283,28638431-286386... 29 4.7
03_03_0012 + 13737898-13740031,13740347-13740486 29 4.7
03_03_0008 - 13674602-13674708,13675272-13675439,13676169-136767... 29 4.7
10_08_0252 - 16191136-16191279,16191639-16191750,16191833-161919... 28 6.2
08_02_1585 - 28052927-28053088,28053343-28053579,28053970-280541... 28 6.2
05_07_0331 - 29324967-29326256,29326919-29327020,29327226-293272... 28 6.2
01_01_0975 - 7686297-7686458,7687117-7687245,7687754-7687831,768... 28 6.2
11_06_0768 + 27129007-27129038,27129140-27129220,27129723-271300... 28 8.2
08_02_1176 + 24931728-24931877,24933175-24933275,24934410-249347... 28 8.2
08_02_0746 + 20721421-20721649,20722912-20722971,20723318-207233... 28 8.2
06_03_1306 + 29208882-29209547,29209641-29209854,29209947-292100... 28 8.2
06_03_1053 + 27224824-27225618 28 8.2
01_06_0486 - 29729333-29729356,29729856-29730106,29730364-297304... 28 8.2
01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117... 28 8.2
>10_08_0817 - 20792817-20793360,20794061-20794156,20795193-20795296
Length = 247
Score = 33.9 bits (74), Expect = 0.12
Identities = 23/71 (32%), Positives = 27/71 (38%), Gaps = 14/71 (19%)
Frame = -3
Query: 659 CXMCGXMGHFDPRWPR-KICVNCGXPNHIYS-----TMCXNC--------SSWNSLKCAE 522
C C GHF P +C CG P HI + +C NC S N C
Sbjct: 41 CNNCKRPGHFARDCPNVALCHACGLPGHIAAECSSKDLCWNCKEPGHMANSCPNEGICRN 100
Query: 521 CGQXGHPXSHC 489
CG+ GH C
Sbjct: 101 CGKSGHIAREC 111
Score = 31.1 bits (67), Expect = 0.88
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -3
Query: 623 RWPRKICVNCGXPNHIYSTMCXNCSSWNSLKCAECGQXGHPXSHC 489
R+P +C NC P H ++ C N + C CG GH + C
Sbjct: 35 RFPNDLCNNCKRPGH-FARDCPNVA-----LCHACGLPGHIAAEC 73
>09_01_0019 + 403078-404211
Length = 377
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = -2
Query: 273 GKQNNLRNKQIQDKNTSQDSTASSERTPRNDRKRQSKSXTAHESHVNKKRNLSTSDDTEM 94
G+ + R+ + D + S ++ ++ RKR +S ES +KKR+ + D +
Sbjct: 226 GRSKHRRSTKRSDTEDDLEEERSKDKKKKSRRKRHERSDEDSESDSDKKRHRKSRKDRKR 285
Query: 93 RRN 85
RR+
Sbjct: 286 RRS 288
>05_06_0098 + 25560158-25560925
Length = 255
Score = 32.7 bits (71), Expect = 0.29
Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 10/92 (10%)
Frame = -2
Query: 414 NTISCSAAGARAAVTSSTRVETPYPXPVSRSN------SPYVCMYRAI----YPPTPGKQ 265
+T S S + A AA +SS P P P S S+ SP + R I +P T +
Sbjct: 11 STSSSSPSSAAAAASSSPSSHRPPPPPPSSSSQPALPPSPRTVVPRTIDTTPFPTTFVQA 70
Query: 264 NNLRNKQIQDKNTSQDSTASSERTPRNDRKRQ 169
+ KQ+ T D+T S+R P Q
Sbjct: 71 DTASFKQVVQMLTGSDTTPPSQRPPAKSNHHQ 102
>03_05_0211 -
22020515-22020687,22020801-22020831,22022060-22022169,
22022715-22023102,22023344-22023397,22023739-22023849,
22023956-22024015,22024618-22024694,22026155-22026188,
22026267-22027235
Length = 668
Score = 32.3 bits (70), Expect = 0.38
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Frame = -2
Query: 279 TPGKQNN--LRNKQIQDKNTSQDSTASSERTPRNDRKRQSK--SXTAHESHVNKKRNLST 112
TP K+ N L +D++ + + SE + K ++K S A ++ KK +
Sbjct: 444 TPSKKRNKALEYDTDEDEDDADPMKSDSEEDDYDSEKEKAKKNSSDAKDTASKKKAATGS 503
Query: 111 SDDTEMRRNTKSPIANTPQRKISQSIEDP 25
S T R + TP K+S+ E P
Sbjct: 504 SHKTGTPRTVSKSSSKTPSSKVSKEKESP 532
>10_08_0198 +
15688142-15690427,15690524-15690607,15691232-15691336,
15691420-15691528,15693037-15693188,15693278-15693583
Length = 1013
Score = 31.9 bits (69), Expect = 0.50
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -2
Query: 240 QDKNTSQDSTASSERTPRNDRKR--QSKSXTAHESHVNKKRNLSTSDDTEMRRNTKSPIA 67
+ K+ S D T+S R+ R QSK+ +A E+H + +DTE R+ +
Sbjct: 121 RSKSRSSDRTSSDRADTRDSRSSADQSKNRSAREAHDYRNELSERWEDTERRKGSARTDK 180
Query: 66 NTPQRK 49
N R+
Sbjct: 181 NDQDRR 186
>07_03_0363 +
17225472-17226778,17226910-17226917,17227313-17227488,
17227822-17227882,17227955-17228053,17228155-17228249,
17228411-17228482,17228668-17228735,17228934-17229390,
17229486-17229596
Length = 817
Score = 31.9 bits (69), Expect = 0.50
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 252 NKQIQDKNTSQDSTASSERTPRNDRKRQSKSXTAHESHVNK-KRNLSTSDDT 100
NK ++ K D+ S +R P+ D+KR+ K A E H + K N SDDT
Sbjct: 341 NKTVEQKTLKDDAWKSHDRDPK-DKKRE-KDMDAGERHDQRSKYNDKESDDT 390
>05_01_0148 -
985745-986180,986290-986385,986498-986694,986824-986919,
987020-987059,987751-987857
Length = 323
Score = 31.9 bits (69), Expect = 0.50
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -3
Query: 605 CVNCGXPNHIYSTMCXNCSSWNSLKCAECGQXGHPXSHC 489
C NCG H ++ C W + KC CG+ GH +C
Sbjct: 104 CFNCGIDGH-WARDC-KAGDWKN-KCYRCGERGHIERNC 139
>05_01_0112 -
757514-758444,758525-758571,759074-759236,759861-760366
Length = 548
Score = 31.9 bits (69), Expect = 0.50
Identities = 19/66 (28%), Positives = 22/66 (33%)
Frame = -3
Query: 686 DTCHMKPAXCXMCGXMGHFDPRWPRKICVNCGXPNHIYSTMCXNCSSWNSLKCAECGQXG 507
D+ + K C CG GH P K + SS C ECG G
Sbjct: 357 DSSNNKIRICYECGTPGHISSSCPNKKASEAISDEKKANVDSVTASSKKRRTCYECGIPG 416
Query: 506 HPXSHC 489
H S C
Sbjct: 417 HLSSAC 422
>04_03_1037 -
21901989-21902468,21903308-21903526,21903984-21904106,
21904225-21904392
Length = 329
Score = 31.9 bits (69), Expect = 0.50
Identities = 16/58 (27%), Positives = 33/58 (56%)
Frame = -2
Query: 252 NKQIQDKNTSQDSTASSERTPRNDRKRQSKSXTAHESHVNKKRNLSTSDDTEMRRNTK 79
++++QD TS+ S+R+P++ R + TA+ES ++ + S D+ R+T+
Sbjct: 207 DEKVQDAKTSKVGAEVSDRSPKHKRDSGEGAETANESRSVEEPATTQSRDSAAARSTE 264
>03_02_0609 -
9823120-9823573,9823903-9824102,9824240-9824335,
9824454-9824567,9824711-9824774,9825206-9825312
Length = 344
Score = 31.9 bits (69), Expect = 0.50
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -3
Query: 605 CVNCGXPNHIYSTMCXNCSSWNSLKCAECGQXGHPXSHC 489
C NCG H ++ C W + KC CG+ GH +C
Sbjct: 151 CFNCGIDGH-WARDC-KAGDWKN-KCYRCGERGHIERNC 186
>10_08_0253 - 16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 31.5 bits (68), Expect = 0.67
Identities = 13/59 (22%), Positives = 29/59 (49%)
Frame = -2
Query: 258 LRNKQIQDKNTSQDSTASSERTPRNDRKRQSKSXTAHESHVNKKRNLSTSDDTEMRRNT 82
++ ++D+N Q +++R P +D + A +S NK N + + E++ +T
Sbjct: 4755 VKQSSMEDENRVQKEEHNTDRAPGDDHNLEVPHLQASQSRTNKSENANNLEHREIQTDT 4813
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 31.1 bits (67), Expect = 0.88
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -3
Query: 617 PRKICVNCGXPNHIYSTMCXNCSSWNSLK-CAECGQXGHPXSHCXD 483
P + C C +H+ + +C S W K C C Q GH +C D
Sbjct: 68 PGERCFICKAADHV-AKVCPEKSLWEKNKICLLCRQRGHSLKNCPD 112
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -3
Query: 620 WPR-KICVNCGXPNHIYSTMCXNCSSWNSLK-CAECGQXGHPXSHC 489
W + KIC+ C H C + + N K C CG+ GH S C
Sbjct: 91 WEKNKICLLCRQRGHSLKN-CPDKNDENLKKFCYNCGESGHSLSKC 135
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/46 (30%), Positives = 16/46 (34%)
Frame = -1
Query: 400 FCSGCTRRGHXIHTCRNTIPXSGLPIKLTICVYVQSHLSADPGETK 263
FC C GH + C I G Q HLS + E K
Sbjct: 121 FCYNCGESGHSLSKCPKPIENGGTKFASCFVCKQQGHLSKNCPENK 166
>03_05_0179 -
21583234-21584336,21586274-21586358,21586665-21586713,
21586801-21586874,21586958-21587050,21587120-21587174,
21587348-21587421,21587702-21587814,21587911-21588168,
21588915-21589012,21589139-21589256,21589754-21589848,
21590001-21590159,21590336-21590525,21590881-21591021,
21591142-21591176,21591659-21591699
Length = 926
Score = 31.1 bits (67), Expect = 0.88
Identities = 24/82 (29%), Positives = 38/82 (46%)
Frame = -2
Query: 276 PGKQNNLRNKQIQDKNTSQDSTASSERTPRNDRKRQSKSXTAHESHVNKKRNLSTSDDTE 97
P K NNL+NK+I+ + ++ A+ R R +R+R + A + L D
Sbjct: 157 PQKSNNLQNKKIKSREDGREPEAAELR--RGERRRDHEVVFA--AAARDPPTLQRPDFDC 212
Query: 96 MRRNTKSPIANTPQRKISQSIE 31
+R+N K P ANT +E
Sbjct: 213 VRQN-KHPNANTENEMTGGDLE 233
>05_05_0267 -
23704249-23704401,23704476-23704780,23704967-23705674,
23707772-23708114,23708300-23708374,23708625-23708675,
23708747-23708818,23708903-23709042,23709227-23709280,
23709446-23709553,23709769-23709864,23709946-23710005,
23710352-23710411,23711699-23711927
Length = 817
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/78 (19%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = -2
Query: 273 GKQNNLRNKQIQDKNTSQDSTASSERTPRNDRKRQSKSXTAHESHVNKKRNLSTS----D 106
G++ R + + + + + + S+ + R +K ++ S E H + +NL+ + +
Sbjct: 4 GEEKEERKRGSKSQMEGESTMSESKSSSRGKKKSKTTSEQKVEIHTKETQNLANTKKKQE 63
Query: 105 DTEMRRNTKSPIANTPQR 52
+ +++RN K+P+ Q+
Sbjct: 64 EGKIKRNKKAPVQGVIQK 81
>08_02_1242 -
25513665-25513997,25514184-25514257,25514317-25514422,
25514507-25514557,25514629-25514700,25514785-25514924,
25515109-25515162,25515328-25515435,25515652-25515747,
25515828-25515887,25516234-25516293,25517581-25517809
Length = 460
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/78 (19%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = -2
Query: 273 GKQNNLRNKQIQDKNTSQDSTASSERTPRNDRKRQSKSXTAHESHVNKKRNLSTS----D 106
G++ R + + + + + + S+ + R +K ++ S E H + +NL + +
Sbjct: 4 GEEKEERKRGSKSQMEGESTMSESKSSSRGKKKSKTTSEQKVEIHTKETQNLENTKKKQE 63
Query: 105 DTEMRRNTKSPIANTPQR 52
+ +++RN K+P+ Q+
Sbjct: 64 EGKIKRNKKAPVQGVIQK 81
>02_01_0302 - 2021221-2023305
Length = 694
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = -2
Query: 390 GARAAVTSSTRVETPYPXPVSRSNSPYVCMYRAIYPPTPG 271
G A V+S R PYP P S S +P + YP PG
Sbjct: 399 GPPAPVSSPPRRRGPYPQPPSSSPTPSYPSPSSSYPAPPG 438
>12_01_1113 -
11888691-11888900,11891794-11892243,11892274-11892950,
11893396-11893957,11894121-11894207
Length = 661
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = -3
Query: 620 WPRKICVNCGXPNHIYSTMCXNCSSWNSLKCAECGQXGHPXSHC 489
+PR+ V N ++ S S KC++C GH S C
Sbjct: 151 FPRRNVVQVSGSNLLHDGSSSKAGSLGSFKCSKCLATGHSRSDC 194
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/71 (23%), Positives = 29/71 (40%)
Frame = -2
Query: 348 PYPXPVSRSNSPYVCMYRAIYPPTPGKQNNLRNKQIQDKNTSQDSTASSERTPRNDRKRQ 169
P P P +S+ P + PP+P K ++ +T + S+ SE +
Sbjct: 915 PPPTPTPKSSPP---SHEEYVPPSPAKSTPPPEEKSPPSHTPESSSPPSEESEPPPSPTP 971
Query: 168 SKSXTAHESHV 136
S +HE +V
Sbjct: 972 KSSPPSHEEYV 982
>11_03_0149 +
10787332-10787454,10787776-10788529,10790406-10790473,
10791254-10791421
Length = 370
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = -3
Query: 659 CXMCGXMGHFDPRWPRKICVNCGXPNHIYSTMCXNCSSWNSLKCAECGQXGH 504
C CG GH+ + P+K + G + + M + + C +CG GH
Sbjct: 136 CFNCGGKGHYSNKCPQKQKQH-GVRSTNAAAMKDKTPNLTGVTCFDCGDRGH 186
>05_01_0455 -
3614011-3614503,3615007-3615072,3615154-3615347,
3615562-3615657,3615790-3615829,3616729-3616856
Length = 338
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -3
Query: 605 CVNCGXPNHIYSTMCXNCSSWNSLKCAECGQXGHPXSHC 489
C NCG H + C W + +C CG+ GH C
Sbjct: 110 CFNCGMEGHWHRN-C-TAGDWTN-RCYGCGERGHILREC 145
>05_01_0084 + 562119-562411,562854-562902,563151-563162,563194-563327,
563716-566278
Length = 1016
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -3
Query: 605 CVNCGXPNHIYSTMCXNCSSWNSLKCAECGQXGHPXSHC 489
C C P H Y+ C S+ L+C +C Q GH C
Sbjct: 926 CYKCKQPGH-YARDCPGQST-GGLECFKCKQPGHFSRDC 962
>04_04_1079 - 30663919-30665044,30665143-30665298,30665405-30665563,
30665640-30665770,30666230-30666315,30666607-30666673,
30666944-30667023,30667173-30667260,30667380-30667428,
30667516-30667608,30667725-30667808,30667986-30668044,
30668293-30668327,30668416-30668718,30669111-30669275,
30669701-30669780,30670932-30671003,30671143-30671234,
30671359-30671433,30671552-30671688,30671763-30671890,
30671942-30672033,30672473-30672808
Length = 1230
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -2
Query: 204 SERT--PRNDRKRQS-KSXTAHESHVNKKRNLSTSDDTEMRRNTKSPIANTPQRKISQ 40
SE T P ND+ ++ K+ T+H H +KR +S + + P+ T R+ +Q
Sbjct: 856 SEETVQPCNDKLEENEKADTSHVKHAPRKRGRPSSSASRTAKPAPRPVRRTRARRGNQ 913
>04_04_0844 -
28637393-28638118,28638206-28638283,28638431-28638607,
28639124-28639537
Length = 464
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = -2
Query: 285 PPTPGKQNNLRNKQIQDKNTSQDSTASSERTPRNDRKRQSKSXTAHESHVNK 130
PPTP K + ++ + S SS +TP ++R + +S + + ++K
Sbjct: 199 PPTPEKYDQATHEGVPKHGRSGSLKGSSSKTPGSERLTRERSESCGRNWLDK 250
>03_03_0012 + 13737898-13740031,13740347-13740486
Length = 757
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +3
Query: 210 QSNLGMYFCLESVCSSNCFVSPGSADRWLCTYTHMVSLIGRPXKGMVFRHVW 365
Q+ LG Y +ES+ + C + Y+ ++ ++G VFR +W
Sbjct: 434 QNKLGQYSLIESISTRECKLFSTLGGFLYQIYSRLLGILGLQYIEQVFREMW 485
>03_03_0008 -
13674602-13674708,13675272-13675439,13676169-13676787,
13676868-13677330,13677855-13678036,13678093-13678235,
13678315-13678423,13679000-13679456,13680490-13682473,
13682507-13682626,13682920-13682971
Length = 1467
Score = 28.7 bits (61), Expect = 4.7
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 13/99 (13%)
Frame = -2
Query: 285 PPTPGKQNNLRNKQIQDKNTSQDSTASSERTPRNDRKRQSKSXTAHESHVNK-------- 130
P TPG NN NK++ + T DST SE + + Q KS A + K
Sbjct: 241 PGTPGTSNN--NKKL-NYTTKVDSTCDSETSQNGALETQFKSHDASSIPMKKSVIFKRKR 297
Query: 129 --KRNL---STSDDTEMRRNTKSPIANTPQRKISQSIED 28
RN+ ST D E + A++P K + D
Sbjct: 298 KPSRNIFSHSTDKDDEFQAELSEKTADSPNPKTEVNKSD 336
>10_08_0252 -
16191136-16191279,16191639-16191750,16191833-16191924,
16192564-16192641,16192764-16192796,16193712-16193771,
16193912-16193999,16194155-16194180
Length = 210
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Frame = -3
Query: 608 ICVNCGXPN----HIYSTMCXNCSSWNSLKCAECGQ 513
+C +CG + H+ + C CSS+N+ + CG+
Sbjct: 167 LCNDCGATSNVNFHVLAQKCPGCSSYNTRETRGCGR 202
>08_02_1585 -
28052927-28053088,28053343-28053579,28053970-28054176,
28054797-28054876,28055059-28055137
Length = 254
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/87 (22%), Positives = 39/87 (44%)
Frame = -2
Query: 303 MYRAIYPPTPGKQNNLRNKQIQDKNTSQDSTASSERTPRNDRKRQSKSXTAHESHVNKKR 124
+++ I+ ++ ++ Q++ T + S ERT RK+++ + T S N
Sbjct: 45 VFKKIHVVVEDEERQIQGTQLEGVGTGR----SMERTSEERRKKRTTNATQRASLENASH 100
Query: 123 NLSTSDDTEMRRNTKSPIANTPQRKIS 43
+S R T + I +TP R+ S
Sbjct: 101 RVSHQLQCTPRHATITIILHTPIRRSS 127
>05_07_0331 -
29324967-29326256,29326919-29327020,29327226-29327278,
29327628-29327674,29327762-29327841,29327933-29328016,
29328383-29328433,29328925-29329050,29329231-29329347,
29329710-29329851,29329986-29330053,29330509-29330608,
29330713-29330840,29330929-29330997,29331083-29331205
Length = 859
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 285 PPTPGKQNNLRNKQIQDKNTSQDSTASSERTPRNDRK 175
PP P ++ L Q+ D + D+ ASS +P R+
Sbjct: 472 PPPPPPRHELPLLQLNDHQEADDADASSSSSPHQQRR 508
>01_01_0975 -
7686297-7686458,7687117-7687245,7687754-7687831,
7688011-7688469,7690648-7690788,7691771-7692421
Length = 539
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 345 YPXPVSRSNSPYVCMYRAIYPPTPGKQNNLRNKQIQ-DKNTSQDS 214
+P P P+ MYR I PP+P + N L Q+Q D + S++S
Sbjct: 447 FPVPPVPGMVPHP-MYRPIPPPSPPQGNKLAALQLQLDAHPSKES 490
>11_06_0768 + 27129007-27129038,27129140-27129220,27129723-27130089,
27130165-27130255,27130515-27130595,27130764-27131830,
27132060-27132071,27132465-27133209,27133210-27135244,
27135712-27135787,27135925-27136029,27137080-27137166
Length = 1592
Score = 27.9 bits (59), Expect = 8.2
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = -2
Query: 282 PTPGKQNNLRNK-QIQDKNTSQDSTASSERTPRNDRKRQSKSXTAHESHVNKKRNLSTSD 106
P P KQ + + + D + S+ + P N+ + + S + ++HV +RN+ TSD
Sbjct: 1014 PEPDKQVKRQFEFKTHDGSDSRLEPVRTVPLPVNNWEMRHASYSQKQNHVEGQRNVRTSD 1073
Query: 105 DTEMRRNTKSPIANTPQRKISQSIED 28
T + A +S+S D
Sbjct: 1074 ATNIYEGRDRTRAFYEVPSLSKSFSD 1099
>08_02_1176 +
24931728-24931877,24933175-24933275,24934410-24934788,
24935509-24936354,24936555-24936642,24936947-24937039,
24937221-24937318,24937364-24937470,24938266-24938353,
24938748-24939005
Length = 735
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = -3
Query: 335 RSPDQTHHMCVCTEPSIRRPRGNKTI*GTNRFKTKIHPKIRLRLQNELQG 186
RS DQTH CV +EPS R R + G R + P +R L++ L G
Sbjct: 128 RSKDQTHPECV-SEPSTTRSRTKRDWKGIGREGNENFP-LRSVLKDILHG 175
>08_02_0746 +
20721421-20721649,20722912-20722971,20723318-20723377,
20723458-20723553,20723764-20723871,20724037-20724090,
20724275-20724414,20724499-20724570,20724642-20724692,
20724943-20725017,20725205-20725585,20726372-20727604,
20727679-20727831
Length = 903
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/78 (17%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = -2
Query: 273 GKQNNLRNKQIQDKNTSQDSTASSERTPRNDRKRQSKSXTAHESHVNKKRNLSTS----D 106
G++ R + + + + + + S+ + R +K ++ E H + +NL + +
Sbjct: 4 GEEKEERKRGSKSQMEGESTMSESKSSSRGKKKSKTTFEQKVEIHTKETQNLENTKKKQE 63
Query: 105 DTEMRRNTKSPIANTPQR 52
+ +++RN K+P+ Q+
Sbjct: 64 EGKIKRNKKAPVQGVIQK 81
>06_03_1306 +
29208882-29209547,29209641-29209854,29209947-29210023,
29210132-29210171,29210254-29210323,29210419-29210488,
29210747-29210995,29212810-29214700,29215458-29215771
Length = 1196
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/66 (22%), Positives = 32/66 (48%)
Frame = -2
Query: 408 ISCSAAGARAAVTSSTRVETPYPXPVSRSNSPYVCMYRAIYPPTPGKQNNLRNKQIQDKN 229
+SC+A+ ++ + PY P + P + + I P + +N+ + Q+QD
Sbjct: 612 VSCNASSSQKGGQTIEVTRPPYQNPCMMNKPPEISSGQRIDPLSFSMENS--SSQMQDSE 669
Query: 228 TSQDST 211
+S++ T
Sbjct: 670 SSKEPT 675
>06_03_1053 + 27224824-27225618
Length = 264
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -2
Query: 261 NLRNKQIQDKNTSQDSTASSERTPRNDRKRQ 169
++ + ++ N D A+ ++ PRNDRKR+
Sbjct: 12 SVESLRVTGANADVDGVAAEKKPPRNDRKRK 42
>01_06_0486 -
29729333-29729356,29729856-29730106,29730364-29730466,
29730571-29730663,29730773-29730905,29731184-29731272,
29731385-29731553,29731930-29732016,29732388-29732506,
29732554-29732706
Length = 406
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = -3
Query: 689 EDTCHMKPAXCXMCGXMGHFDPRWPRKICV 600
E+ C +P C CG GH PR V
Sbjct: 367 ENECQRQPRHCSQCGERGHNRRNCPRSTTV 396
>01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,
1171148-1171398,1171442-1171687,1172220-1172415,
1172796-1172876,1172966-1173169,1173671-1173880,
1173953-1174174,1174437-1174480,1174974-1175052,
1175066-1175227,1175337-1175564,1175786-1175815,
1175905-1176273,1176356-1176571,1177202-1177683,
1177930-1177975
Length = 1352
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/73 (20%), Positives = 30/73 (41%)
Frame = -2
Query: 270 KQNNLRNKQIQDKNTSQDSTASSERTPRNDRKRQSKSXTAHESHVNKKRNLSTSDDTEMR 91
+++ R+ D S + + SE R ++ + H S + + +SDD E R
Sbjct: 1167 RRSKRRSSDSSDDTDSDEYDSGSEEENRRKKRSHRRKHRRHSSRSDSDASDYSSDDEERR 1226
Query: 90 RNTKSPIANTPQR 52
+ K ++ R
Sbjct: 1227 SSKKDHSSSRSHR 1239
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,925,111
Number of Sequences: 37544
Number of extensions: 386874
Number of successful extensions: 1583
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1576
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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