Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1374
         (700 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   2.8  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   2.8  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   2.8  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   6.4  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   6.4  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   8.5  

>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3

Query: 612 AKNMVISVIGWLWSLQSGSTNKTKP 686
           A  + I     LW L SG  N T+P
Sbjct: 124 ASKLAIDKCDRLWVLDSGLVNNTQP 148


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3

Query: 612 AKNMVISVIGWLWSLQSGSTNKTKP 686
           A  + I     LW L SG  N T+P
Sbjct: 124 ASKLAIDKCDRLWVLDSGLVNNTQP 148


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3

Query: 612 AKNMVISVIGWLWSLQSGSTNKTKP 686
           A  + I     LW L SG  N T+P
Sbjct: 124 ASKLAIDKCDRLWVLDSGLVNNTQP 148


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 645 LWSLQSGSTNKTKP 686
           LW L SG  N T+P
Sbjct: 140 LWVLDSGLVNNTQP 153


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3

Query: 612 AKNMVISVIGWLWSLQSGSTNKTKP 686
           A  + I     LW L SG  N T+P
Sbjct: 128 AYKIAIDKFDRLWILDSGIINNTQP 152


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 645 LWSLQSGSTNKTKP 686
           LW L SG  N+T P
Sbjct: 136 LWVLDSGLVNRTVP 149


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,996
Number of Sequences: 438
Number of extensions: 3606
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)