Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1373
         (690 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    31   0.026
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   3.9  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   5.2  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              23   9.1  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   9.1  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   9.1  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   9.1  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   9.1  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 31.5 bits (68), Expect = 0.026
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = -1

Query: 612 QGPRQHVVGERRISPRARXQAGE*RHQQHPGGHQDLREQLQR 487
           Q  +Q   GER + P+ R Q  + +HQQ     Q  R+Q QR
Sbjct: 286 QQQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQQQQRQQQQR 327



 Score = 23.0 bits (47), Expect = 9.1
 Identities = 15/58 (25%), Positives = 26/58 (44%)
 Frame = -1

Query: 513 QDLREQLQRLPPGRLLVRGIPRRTVQGPARPRRQGLDPQEDDGQARRPRRVHXRQETP 340
           Q  ++Q Q+   G   V    R+  Q     ++Q   PQ+   Q +RP++   +Q  P
Sbjct: 436 QQQQQQQQQQQQGERYVPPQLRQQRQQQQPQQQQQQRPQQQRPQQQRPQQQRSQQRKP 493


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +1

Query: 490 LKLLSQVLMTSRMLLVTSLSSL 555
           LKLL+ V MTS+M+L+T L  L
Sbjct: 897 LKLLA-VCMTSQMMLITQLMPL 917


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = -2

Query: 599 NTSWESGASALEHAXKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYK 435
           NT     ASA   A +  + V    +E      S  ND+++ D++SG   + + K
Sbjct: 828 NTITYGTASAPFLAIRTLNQVLEDNKEKYPLAASRINDFYVDDFISGADSENEAK 882


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 19/82 (23%), Positives = 33/82 (40%)
 Frame = -1

Query: 612 QGPRQHVVGERRISPRARXQAGE*RHQQHPGGHQDLREQLQRLPPGRLLVRGIPRRTVQG 433
           Q  +QH   E++   R + Q  +  HQ+     Q  R+Q Q+     L    + RR    
Sbjct: 264 QQQQQHQQREQQQQQRVQQQNQQ--HQRQQQQQQQQRQQQQQQEQQELWTTVVRRRQNTQ 321

Query: 432 PARPRRQGLDPQEDDGQARRPR 367
             +   Q    Q+  G+ + P+
Sbjct: 322 QQQQSNQPQQQQQQTGRYQPPQ 343


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
 Frame = -1

Query: 630 NHXHHVQGP-RQHVVGERRISPRARXQAGE*RH---QQHPGGHQDLREQ 496
           N  HH  GP R   + E     R + Q  +  H   QQHP  HQ   +Q
Sbjct: 223 NSLHH--GPLRDKELTEHEQLERLQQQQQQQTHHQQQQHPSSHQQQSQQ 269


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
 Frame = -1

Query: 630 NHXHHVQGP-RQHVVGERRISPRARXQAGE*RH---QQHPGGHQDLREQ 496
           N  HH  GP R   + E     R + Q  +  H   QQHP  HQ   +Q
Sbjct: 223 NSLHH--GPLRDKELTEHEQLERLQQQQQQQTHHQQQQHPSSHQQQSQQ 269


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
 Frame = -1

Query: 630 NHXHHVQGP-RQHVVGERRISPRARXQAGE*RH---QQHPGGHQDLREQ 496
           N  HH  GP R   + E     R + Q  +  H   QQHP  HQ   +Q
Sbjct: 175 NSLHH--GPLRDKELTEHEQLERLQQQQQQQTHHQQQQHPSSHQQQSQQ 221


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
 Frame = -1

Query: 630 NHXHHVQGP-RQHVVGERRISPRARXQAGE*RH---QQHPGGHQDLREQ 496
           N  HH  GP R   + E     R + Q  +  H   QQHP  HQ   +Q
Sbjct: 223 NSLHH--GPLRDKELTEHEQLERLQQQQQQQTHHQQQQHPSSHQQQSQQ 269


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,836
Number of Sequences: 2352
Number of extensions: 11699
Number of successful extensions: 22
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)