Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1373
(690 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106592-2|AAK21364.1| 170|Caenorhabditis elegans Ferritin prot... 55 4e-08
AF016447-16|AAG24016.1| 170|Caenorhabditis elegans Ferritin pro... 43 2e-04
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 30 1.8
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 30 1.8
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 30 1.8
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 29 3.1
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z82076-6|CAH10809.1| 450|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z82076-4|CAB04937.2| 438|Caenorhabditis elegans Hypothetical pr... 27 9.6
>AF106592-2|AAK21364.1| 170|Caenorhabditis elegans Ferritin protein
2 protein.
Length = 170
Score = 55.2 bits (127), Expect = 4e-08
Identities = 37/115 (32%), Positives = 57/115 (49%)
Frame = -2
Query: 689 EHATKLIDYLLMRGKLTGSVTTXITYRAPANTSWESGASALEHAXKLESDVTNSIREVIK 510
EHAT+L+ +RG G V + P N W + A E A LE S+ ++
Sbjct: 60 EHATELMRVQNLRG---GRVVLQ-DIQKPENDEWGTALKAFEAALALEKFNNESLLKLHS 115
Query: 509 TCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFXFDKK 345
T + ND HL D++ ++LDEQ K + A + LK++ +GE+ FDK+
Sbjct: 116 TA-GNHNDAHLTDFIEEKYLDEQVKSINEFARMVANLKRV---GPGVGEYVFDKE 166
>AF016447-16|AAG24016.1| 170|Caenorhabditis elegans Ferritin
protein 1 protein.
Length = 170
Score = 42.7 bits (96), Expect = 2e-04
Identities = 33/114 (28%), Positives = 52/114 (45%)
Frame = -2
Query: 686 HATKLIDYLLMRGKLTGSVTTXITYRAPANTSWESGASALEHAXKLESDVTNSIREVIKT 507
HAT+L+ +RG G V + P W + A E A LE S+ ++
Sbjct: 61 HATELMRIQAVRG---GRVAMQ-NIQKPEKDEWGTVLEAFEAALALERANNASLLKLHGI 116
Query: 506 CESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFXFDKK 345
E ND HL +Y+ ++L+EQ + A + +K+ LGE+ FDK+
Sbjct: 117 AEQR-NDAHLTNYIQEKYLEEQVHSINEFARHIANIKR---AGPGLGEYLFDKE 166
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 7/98 (7%)
Frame = -1
Query: 573 SPRARXQAGE*RHQQHPGGHQD-LREQLQRLPPGRLLVRGIPRRTVQGPARPRRQGLDPQ 397
SP+ Q + Q QD E L R+ P V +P ++ P+RP + LD
Sbjct: 1949 SPKQAPQIPSTQQQSKLQSRQDQASETLVRVAPAENFVAPVPASSIAAPSRPNQNVLDRV 2008
Query: 396 EDDGQARRP------RRVHXRQETPRIEHINILHVTPP 301
R P + VH Q ++H+ + P
Sbjct: 2009 IAPSLRREPTTTPLIQPVHPVQSVQSVQHMQQQQLARP 2046
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 7/98 (7%)
Frame = -1
Query: 573 SPRARXQAGE*RHQQHPGGHQD-LREQLQRLPPGRLLVRGIPRRTVQGPARPRRQGLDPQ 397
SP+ Q + Q QD E L R+ P V +P ++ P+RP + LD
Sbjct: 1971 SPKQAPQIPSTQQQSKLQSRQDQASETLVRVAPAENFVAPVPASSIAAPSRPNQNVLDRV 2030
Query: 396 EDDGQARRP------RRVHXRQETPRIEHINILHVTPP 301
R P + VH Q ++H+ + P
Sbjct: 2031 IAPSLRREPTTTPLIQPVHPVQSVQSVQHMQQQQLARP 2068
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical protein
R11A8.7d protein.
Length = 1427
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 7/98 (7%)
Frame = -1
Query: 573 SPRARXQAGE*RHQQHPGGHQD-LREQLQRLPPGRLLVRGIPRRTVQGPARPRRQGLDPQ 397
SP+ Q + Q QD E L R+ P V +P ++ P+RP + LD
Sbjct: 792 SPKQAPQIPSTQQQSKLQSRQDQASETLVRVAPAENFVAPVPASSIAAPSRPNQNVLDRV 851
Query: 396 EDDGQARRP------RRVHXRQETPRIEHINILHVTPP 301
R P + VH Q ++H+ + P
Sbjct: 852 IAPSLRREPTTTPLIQPVHPVQSVQSVQHMQQQQLARP 889
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical protein
R11A8.7c protein.
Length = 1405
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 7/98 (7%)
Frame = -1
Query: 573 SPRARXQAGE*RHQQHPGGHQD-LREQLQRLPPGRLLVRGIPRRTVQGPARPRRQGLDPQ 397
SP+ Q + Q QD E L R+ P V +P ++ P+RP + LD
Sbjct: 770 SPKQAPQIPSTQQQSKLQSRQDQASETLVRVAPAENFVAPVPASSIAAPSRPNQNVLDRV 829
Query: 396 EDDGQARRP------RRVHXRQETPRIEHINILHVTPP 301
R P + VH Q ++H+ + P
Sbjct: 830 IAPSLRREPTTTPLIQPVHPVQSVQSVQHMQQQQLARP 867
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 7/98 (7%)
Frame = -1
Query: 573 SPRARXQAGE*RHQQHPGGHQD-LREQLQRLPPGRLLVRGIPRRTVQGPARPRRQGLDPQ 397
SP+ Q + Q QD E L R+ P V +P ++ P+RP + LD
Sbjct: 1949 SPKQAPQIPSTQQQSKLQSRQDQASETLVRVAPAENFVAPVPASSIAAPSRPNQNVLDRV 2008
Query: 396 EDDGQARRP------RRVHXRQETPRIEHINILHVTPP 301
R P + VH Q ++H+ + P
Sbjct: 2009 IAPSLRREPTTTPLIQPVHPVQSVQSVQHMQQQQLARP 2046
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 7/98 (7%)
Frame = -1
Query: 573 SPRARXQAGE*RHQQHPGGHQD-LREQLQRLPPGRLLVRGIPRRTVQGPARPRRQGLDPQ 397
SP+ Q + Q QD E L R+ P V +P ++ P+RP + LD
Sbjct: 1971 SPKQAPQIPSTQQQSKLQSRQDQASETLVRVAPAENFVAPVPASSIAAPSRPNQNVLDRV 2030
Query: 396 EDDGQARRP------RRVHXRQETPRIEHINILHVTPP 301
R P + VH Q ++H+ + P
Sbjct: 2031 IAPSLRREPTTTPLIQPVHPVQSVQSVQHMQQQQLARP 2068
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 29.1 bits (62), Expect = 3.1
Identities = 33/113 (29%), Positives = 40/113 (35%), Gaps = 1/113 (0%)
Frame = -1
Query: 663 PAHEGQADRLXNHXHHVQGPRQHV-VGERRISPRARXQAGE*RHQQHPGGHQDLREQLQR 487
PAH G HH QGP QH G R P G R +H G R Q
Sbjct: 116 PAHHGH---FGPPGHHFQGPPQHFPPGPPR--PHFPGPPGPHRPPEHYPGPP--RPQAPA 168
Query: 486 LPPGRLLVRGIPRRTVQGPARPRRQGLDPQEDDGQARRPRRVHXRQETPRIEH 328
PP + L P P P R P ++H QE+P ++H
Sbjct: 169 APPPKSL---FPSAQKPKPLFAAASSA-PSFFGAPQRPPPQLHFFQESPSVQH 217
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -1
Query: 630 NHXHHVQG-PRQHVVGERRISPRARXQAGE*RHQQHPGGHQDLREQ 496
+H ++ Q PR H G+ R S A + + R+ H GGH R Q
Sbjct: 200 HHNYNSQSSPRSHQGGQDRYS--APKEDNQRRYDNHQGGHDSYRGQ 243
>Z82076-6|CAH10809.1| 450|Caenorhabditis elegans Hypothetical
protein W07G1.5b protein.
Length = 450
Score = 27.5 bits (58), Expect = 9.6
Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 3/112 (2%)
Frame = -1
Query: 585 ERRISPRARXQAGE*RHQ-QHPGGHQDLREQLQRLPPGRLLVRGIPRRTVQGPARPRRQG 409
+R + R R Q R Q Q+ G +QR R L R PARP G
Sbjct: 136 DRIKTARTRSQDPSKRRQPQNSGSSAPTGSGVQRSRSVRTLAEDRKSRRDANPARPNVNG 195
Query: 408 LD--PQEDDGQARRPRRVHXRQETPRIEHINILHVTPPLRSNPF*NVISKKI 259
P++ DG RP+ RQ P+ + I T P +SKK+
Sbjct: 196 ASNAPKKFDG--ARPKAPPARQTIPKPKKILTTSTTNKKPPTPK-RKVSKKV 244
>Z82076-4|CAB04937.2| 438|Caenorhabditis elegans Hypothetical
protein W07G1.5a protein.
Length = 438
Score = 27.5 bits (58), Expect = 9.6
Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 3/112 (2%)
Frame = -1
Query: 585 ERRISPRARXQAGE*RHQ-QHPGGHQDLREQLQRLPPGRLLVRGIPRRTVQGPARPRRQG 409
+R + R R Q R Q Q+ G +QR R L R PARP G
Sbjct: 136 DRIKTARTRSQDPSKRRQPQNSGSSAPTGSGVQRSRSVRTLAEDRKSRRDANPARPNVNG 195
Query: 408 LD--PQEDDGQARRPRRVHXRQETPRIEHINILHVTPPLRSNPF*NVISKKI 259
P++ DG RP+ RQ P+ + I T P +SKK+
Sbjct: 196 ASNAPKKFDG--ARPKAPPARQTIPKPKKILTTSTTNKKPPTPK-RKVSKKV 244
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,890,132
Number of Sequences: 27780
Number of extensions: 263092
Number of successful extensions: 627
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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