Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1372
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         259   7e-71
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         259   7e-71
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         259   7e-71
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          235   1e-63
DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        25   3.0  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  259 bits (634), Expect = 7e-71
 Identities = 120/123 (97%), Positives = 120/123 (97%)
 Frame = -1

Query: 700 NERFRCPEAXFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 521
           NERFRCPEA FQPS LGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD
Sbjct: 253 NERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 312

Query: 520 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 341
           RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVH
Sbjct: 313 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 372

Query: 340 RKC 332
           RKC
Sbjct: 373 RKC 375


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  259 bits (634), Expect = 7e-71
 Identities = 120/123 (97%), Positives = 120/123 (97%)
 Frame = -1

Query: 700 NERFRCPEAXFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 521
           NERFRCPEA FQPS LGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD
Sbjct: 253 NERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 312

Query: 520 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 341
           RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVH
Sbjct: 313 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 372

Query: 340 RKC 332
           RKC
Sbjct: 373 RKC 375


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  259 bits (634), Expect = 7e-71
 Identities = 120/123 (97%), Positives = 120/123 (97%)
 Frame = -1

Query: 700 NERFRCPEAXFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 521
           NERFRCPEA FQPS LGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD
Sbjct: 253 NERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 312

Query: 520 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 341
           RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVH
Sbjct: 313 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 372

Query: 340 RKC 332
           RKC
Sbjct: 373 RKC 375


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  235 bits (574), Expect = 1e-63
 Identities = 108/123 (87%), Positives = 113/123 (91%)
 Frame = -1

Query: 700 NERFRCPEAXFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 521
           NERFR PEA FQPS LGME+ GIHET YNSIM+CDVDIRKDLYAN+VLSGGTTMYPGIAD
Sbjct: 253 NERFRAPEALFQPSFLGMESTGIHETVYNSIMRCDVDIRKDLYANSVLSGGTTMYPGIAD 312

Query: 520 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 341
           RMQKEIT+LAPST+KIKIIAPPERKYSVWIGGSILASL TFQ MWISK EYDE GP IVH
Sbjct: 313 RMQKEITSLAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQTMWISKHEYDEGGPGIVH 372

Query: 340 RKC 332
           RKC
Sbjct: 373 RKC 375


>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -2

Query: 372 STTSLAPPLYTGSAXKRTARRCLQQPAAGCSIQA 271
           S  +L   LY GSA +    R LQQ  +G + QA
Sbjct: 70  SVKALLALLYEGSASRSETERELQQALSGGNSQA 103


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,254
Number of Sequences: 2352
Number of extensions: 12957
Number of successful extensions: 37
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)