Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1372
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 252 2e-67
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 252 2e-67
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 252 2e-67
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 252 2e-67
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 252 2e-67
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 252 2e-67
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 252 2e-67
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 252 2e-67
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 252 2e-67
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 246 1e-65
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 239 1e-63
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 134 8e-32
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 109 2e-24
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 107 1e-23
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 95 6e-20
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 83 2e-16
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 70 1e-12
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 70 1e-12
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.60
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.60
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.60
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 29 3.2
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 29 3.2
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 29 4.2
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 252 bits (617), Expect = 2e-67
Identities = 116/123 (94%), Positives = 119/123 (96%)
Frame = -1
Query: 700 NERFRCPEAXFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 521
NERFRCPEA FQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIAD
Sbjct: 253 NERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIAD 312
Query: 520 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 341
RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVH
Sbjct: 313 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 372
Query: 340 RKC 332
RKC
Sbjct: 373 RKC 375
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 252 bits (617), Expect = 2e-67
Identities = 116/123 (94%), Positives = 119/123 (96%)
Frame = -1
Query: 700 NERFRCPEAXFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 521
NERFRCPEA FQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIAD
Sbjct: 253 NERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIAD 312
Query: 520 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 341
RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVH
Sbjct: 313 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 372
Query: 340 RKC 332
RKC
Sbjct: 373 RKC 375
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 252 bits (617), Expect = 2e-67
Identities = 116/123 (94%), Positives = 119/123 (96%)
Frame = -1
Query: 700 NERFRCPEAXFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 521
NERFRCPEA FQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIAD
Sbjct: 253 NERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIAD 312
Query: 520 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 341
RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVH
Sbjct: 313 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 372
Query: 340 RKC 332
RKC
Sbjct: 373 RKC 375
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 252 bits (617), Expect = 2e-67
Identities = 116/123 (94%), Positives = 119/123 (96%)
Frame = -1
Query: 700 NERFRCPEAXFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 521
NERFRCPEA FQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIAD
Sbjct: 253 NERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIAD 312
Query: 520 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 341
RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVH
Sbjct: 313 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 372
Query: 340 RKC 332
RKC
Sbjct: 373 RKC 375
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 252 bits (617), Expect = 2e-67
Identities = 116/123 (94%), Positives = 119/123 (96%)
Frame = -1
Query: 700 NERFRCPEAXFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 521
NERFRCPEA FQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIAD
Sbjct: 253 NERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIAD 312
Query: 520 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 341
RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVH
Sbjct: 313 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 372
Query: 340 RKC 332
RKC
Sbjct: 373 RKC 375
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 252 bits (617), Expect = 2e-67
Identities = 116/123 (94%), Positives = 119/123 (96%)
Frame = -1
Query: 700 NERFRCPEAXFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 521
NERFRCPEA FQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIAD
Sbjct: 253 NERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIAD 312
Query: 520 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 341
RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVH
Sbjct: 313 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 372
Query: 340 RKC 332
RKC
Sbjct: 373 RKC 375
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 252 bits (617), Expect = 2e-67
Identities = 116/123 (94%), Positives = 119/123 (96%)
Frame = -1
Query: 700 NERFRCPEAXFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 521
NERFRCPEA FQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIAD
Sbjct: 209 NERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIAD 268
Query: 520 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 341
RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVH
Sbjct: 269 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 328
Query: 340 RKC 332
RKC
Sbjct: 329 RKC 331
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 252 bits (617), Expect = 2e-67
Identities = 116/123 (94%), Positives = 119/123 (96%)
Frame = -1
Query: 700 NERFRCPEAXFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 521
NERFRCPEA FQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIAD
Sbjct: 239 NERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIAD 298
Query: 520 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 341
RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVH
Sbjct: 299 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 358
Query: 340 RKC 332
RKC
Sbjct: 359 RKC 361
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 252 bits (617), Expect = 2e-67
Identities = 116/123 (94%), Positives = 119/123 (96%)
Frame = -1
Query: 700 NERFRCPEAXFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 521
NERFRCPEA FQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIAD
Sbjct: 253 NERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIAD 312
Query: 520 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 341
RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVH
Sbjct: 313 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 372
Query: 340 RKC 332
RKC
Sbjct: 373 RKC 375
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 246 bits (602), Expect = 1e-65
Identities = 115/123 (93%), Positives = 118/123 (95%)
Frame = -1
Query: 700 NERFRCPEAXFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 521
NERFRCPEA FQPS LGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIAD
Sbjct: 253 NERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIAD 312
Query: 520 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 341
RMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVH
Sbjct: 313 RMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 371
Query: 340 RKC 332
RKC
Sbjct: 372 RKC 374
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 239 bits (586), Expect = 1e-63
Identities = 110/123 (89%), Positives = 114/123 (92%)
Frame = -1
Query: 700 NERFRCPEAXFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 521
NERFRCPE FQP+ +GME GIHETTY SIMKCDVDIRKDLYANTVLSGGT+M+PGIAD
Sbjct: 252 NERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIAD 311
Query: 520 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 341
RMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASL TFQQMWISKQEYDESGPSIVH
Sbjct: 312 RMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 371
Query: 340 RKC 332
RKC
Sbjct: 372 RKC 374
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 134 bits (323), Expect = 8e-32
Identities = 60/122 (49%), Positives = 83/122 (68%)
Frame = -1
Query: 700 NERFRCPEAXFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 521
N FR PE F+P +G E G+ SIMKCDVD+R+ LY+N VLSGGTT++ G D
Sbjct: 251 NSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGD 310
Query: 520 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSIVH 341
R+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G S +H
Sbjct: 311 RLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMH 370
Query: 340 RK 335
++
Sbjct: 371 KR 372
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 109 bits (261), Expect = 2e-24
Identities = 55/130 (42%), Positives = 74/130 (56%), Gaps = 8/130 (6%)
Frame = -1
Query: 697 ERFRCPEAXFQPSXLGMEA-----CGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 533
ER + PE F L E + + S D+DIR L++N ++GG ++
Sbjct: 306 ERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLFSNVTVTGGNSLIL 365
Query: 532 GIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLXTFQQMWISKQEYDE 362
G +R+ + P T+K+++ A P ERKY WIGGSIL SL TFQQMW+SK EYDE
Sbjct: 366 GFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQMWVSKAEYDE 425
Query: 361 SGPSIVHRKC 332
SG SIV +KC
Sbjct: 426 SGKSIVEKKC 435
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 107 bits (256), Expect = 1e-23
Identities = 55/127 (43%), Positives = 75/127 (59%), Gaps = 13/127 (10%)
Frame = -1
Query: 697 ERFRCPEAXFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADR 518
ERF PE FQP + +E G+ E + I D+D R D Y + VLSGGTTMYPG+ R
Sbjct: 257 ERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSR 316
Query: 517 MQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILASL--XTFQQMWISK 377
++KE+ L A KI+I APP RK+ V++GG++LA+L Q W+SK
Sbjct: 317 LEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSK 376
Query: 376 QEYDESG 356
+EY+E G
Sbjct: 377 KEYEEGG 383
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 94.7 bits (225), Expect = 6e-20
Identities = 38/110 (34%), Positives = 70/110 (63%)
Frame = -1
Query: 700 NERFRCPEAXFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 521
N RF C E F+P G++ G+H+ + +I++C +D R+ LY N L+GG ++ PGIA+
Sbjct: 430 NSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAE 489
Query: 520 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLXTFQQMWISKQE 371
++++E++ + P+T+ ++ P R + ++G I+AS TF+ IS Q+
Sbjct: 490 KLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 83.0 bits (196), Expect = 2e-16
Identities = 48/134 (35%), Positives = 72/134 (53%), Gaps = 17/134 (12%)
Frame = -1
Query: 697 ERFRCPEAXFQPSXLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 521
ERF PE F P E I +T I +C +D+R+ LY N VLSGG+TM+ A
Sbjct: 281 ERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFAR 340
Query: 520 RMQKEITALA----------------PSTMKIKIIAPPERKYSVWIGGSILASLXTFQQM 389
++Q+++ L+ P + +++I+ ++Y+VW GGS+LAS F Q+
Sbjct: 341 KLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQV 400
Query: 388 WISKQEYDESGPSI 347
+K EY E GPSI
Sbjct: 401 SHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Frame = -1
Query: 697 ERFRCPEAXFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADR 518
ERF PE F PS + ++ CG+ E SI +C +R L N ++ GG++ +PG +R
Sbjct: 268 ERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRER 327
Query: 517 MQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSI 347
+++E+ ++ P+ + + + P+ W G L L + WI+++++DE G S+
Sbjct: 328 LEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/120 (29%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Frame = -1
Query: 697 ERFRCPEAXFQPSXLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADR 518
ERF PE F PS + ++ CG+ E SI +C +R L N ++ GG++ +PG +R
Sbjct: 268 ERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRER 327
Query: 517 MQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLXTFQQMWISKQEYDESGPSI 347
+++E+ ++ P+ + + + P+ W G L L + WI+++++DE G S+
Sbjct: 328 LEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSL 383
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = -1
Query: 610 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 446
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 445 ----YSVWIGGSILASL-XTFQQMWISKQEY 368
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.60
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 434 PYGVLPLWRSNDLNLHCRWGESCD 505
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.60
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 434 PYGVLPLWRSNDLNLHCRWGESCD 505
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.60
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 434 PYGVLPLWRSNDLNLHCRWGESCD 505
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 270 KPELSSRPRAAGGSDARCVXKHFLCTMEGPD 362
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 270 KPELSSRPRAAGGSDARCVXKHFLCTMEGPD 362
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 373 EYDESGPSIVHRKCX*THRASLPPAARGRLLNSG 272
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,749,002
Number of Sequences: 27780
Number of extensions: 271015
Number of successful extensions: 663
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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