Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1371
(660 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0437 - 28986459-28986524,28986606-28986731,28986842-289869... 37 0.016
03_05_0754 + 27452203-27452242,27452360-27455611,27456480-274565... 35 0.066
10_08_1036 + 22470642-22470664,22470850-22471024,22471133-22473766 33 0.27
01_01_1127 + 8930593-8932681,8932812-8933401 32 0.47
08_02_1426 + 27009720-27010787,27011846-27012517,27012999-270137... 31 1.1
07_03_1382 - 26170563-26170631,26171151-26171843 30 1.9
08_02_1553 + 27835320-27835364,27836853-27836966,27837062-278374... 29 2.5
08_02_0806 + 21403911-21404203,21406377-21406507,21406851-214069... 29 2.5
05_07_0116 - 27785083-27786123,27786201-27786278,27786364-277869... 29 2.5
05_04_0172 + 18718661-18718930,18719410-18720252,18720326-187203... 29 2.5
02_01_0286 + 1921049-1921726 29 2.5
03_02_0395 - 8091389-8093119,8093637-8093720,8093754-8094773 29 3.3
02_02_0403 - 9866122-9867231 29 3.3
10_05_0113 + 9280756-9283489,9283726-9284048,9284201-9284314 29 4.3
09_05_0015 - 20083143-20083308,20083645-20084017,20084362-200846... 29 4.3
05_07_0079 - 27539389-27539892,27540059-27540343,27540453-275405... 29 4.3
03_06_0711 - 35682293-35682952 29 4.3
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 29 4.3
11_01_0152 + 1270752-1270947,1271113-1271438,1271571-1272128 28 5.7
11_06_0610 - 25449085-25453284 28 7.6
10_08_0472 - 18154797-18155048,18155332-18156318,18156424-181565... 28 7.6
06_01_0638 + 4640218-4640808 28 7.6
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 28 7.6
01_07_0334 - 42818738-42818879,42818987-42819120,42819220-428193... 28 7.6
>02_05_0437 -
28986459-28986524,28986606-28986731,28986842-28986941,
28987583-28987660,28987857-28987937,28989488-28989624,
28989693-28989743,28989785-28989878,28990091-28990260
Length = 300
Score = 36.7 bits (81), Expect = 0.016
Identities = 20/89 (22%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = -3
Query: 652 AGXTPEQADQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRKLG-ITVWKEITEDV 476
+G PEQ L +E+ ++++EI +++ + + D+++++G +T ITE++
Sbjct: 189 SGKIPEQHALLAESKRQEVLQLDNEIVFNEAIIEEREQAIQDIQQQIGELTRTSFITEEI 248
Query: 475 NQGLKNVKESQVYQKTESVIKTTAEKTSS 389
+ ++N + KTE + +K++S
Sbjct: 249 DTNIENSAAATKEAKTELAKASKTQKSNS 277
>03_05_0754 +
27452203-27452242,27452360-27455611,27456480-27456533,
27456774-27456872,27456948-27457012,27457476-27457575,
27458326-27458408,27458494-27458569,27458920-27459698
Length = 1515
Score = 34.7 bits (76), Expect = 0.066
Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Frame = -3
Query: 628 DQLRA---EWSRELARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITEDVNQGLKN 458
D+ RA EW + + + D+I TL L SK R + D + +L + E+ + L
Sbjct: 220 DEFRAAKKEWGSDRSMLVDQIGTLEVNLDSKTRMAEDFRSRLEMCSQALAHEEGRRKLLE 279
Query: 457 VKESQVYQKTESVIKTTAEKTSSIIGGITAGVSSKLGQMRNS 332
+ S++ +V+ + E+ S I + A ++ +R+S
Sbjct: 280 AEMSELKHLYGNVV-SDYEEARSTIESLAAKRDGEIASLRSS 320
>10_08_1036 + 22470642-22470664,22470850-22471024,22471133-22473766
Length = 943
Score = 32.7 bits (71), Expect = 0.27
Identities = 31/118 (26%), Positives = 57/118 (48%)
Frame = -3
Query: 628 DQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITEDVNQGLKNVKE 449
D RAE + EL RV+DE+A L + RQ +D T+ E++
Sbjct: 174 DLRRAELAAELGRVKDELA-LAVEATNTARQIADANADKAATLAAEVS------------ 220
Query: 448 SQVYQKTESVIKTTAEKTSSIIGGITAGVSSKLGQMRNSESFRSIEERVGSAYENVKG 275
+ +S ++T AE+ ++I+ + + S +++N+E+ R +E VG A + + G
Sbjct: 221 -----RLQSELETKAEEATAIVAKLESEASGLRAELQNAEASR--KEDVGRAEQLLHG 271
>01_01_1127 + 8930593-8932681,8932812-8933401
Length = 892
Score = 31.9 bits (69), Expect = 0.47
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = -3
Query: 628 DQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRK---LGITVWKEITEDVNQGLKN 458
D R +W RE AR++ EI R Q +DLKRK L W+ I E + L+
Sbjct: 126 DSRRKDW-RE-ARLKQEIERYRASNPKITEQFADLKRKLVDLSAQEWESIPEIGDYSLRR 183
Query: 457 VKESQVYQKTESVIKTTAEKTSSIIGGITA 368
K+ + ++ V T EK G +TA
Sbjct: 184 NKKRR-FESFVPVPDTLLEKARQEQGHVTA 212
>08_02_1426 +
27009720-27010787,27011846-27012517,27012999-27013793,
27014914-27014943,27018095-27019987
Length = 1485
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -3
Query: 292 YENVKGKVAXRSNSTQSFDEALRDASGATSPPIPEHKPLP 173
YE VK +++ T+S A G SPP+P + P
Sbjct: 352 YEEVKDSPTEQTDKTKSSSNATASTEGRKSPPVPNERKDP 391
>07_03_1382 - 26170563-26170631,26171151-26171843
Length = 253
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/81 (28%), Positives = 37/81 (45%)
Frame = -3
Query: 421 VIKTTAEKTSSIIGGITAGVSSKLGQMRNSESFRSIEERVGSAYENVKGKVAXRSNSTQS 242
V+ T + ++ GG VSS+L + R + +E RVG + + G A + Q
Sbjct: 115 VVVTNPDAIAAAGGGGWPAVSSRLPRSRTGGGYSQVEGRVGEYWYHA-GMEAFFDDERQY 173
Query: 241 FDEALRDASGATSPPIPEHKP 179
EA + A+ PP P +P
Sbjct: 174 --EAAKAAAQLGPPPPPPPQP 192
>08_02_1553 +
27835320-27835364,27836853-27836966,27837062-27837457,
27837751-27837822,27837957-27838082,27838164-27838244,
27838364-27838558,27839018-27840013
Length = 674
Score = 29.5 bits (63), Expect = 2.5
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
Frame = -3
Query: 523 KRKLGITVWKEITEDVNQGLKNVKESQVYQKTESVIKTTAEKTSSIIGGITAG--VSSKL 350
K+++ I+ WK D N+ +K ++ + SV++ + GG AG SS
Sbjct: 374 KKQVKISAWKLAKLDTNEAMKAAARARA---SSSVLRPVDARHR---GGHDAGDLSSSGN 427
Query: 349 GQMRNSESFRSIEERVGSAYENVKGKVAXRSNSTQSFDEALRDASGATSPPIPEHKPLP 173
G +R+S S + E+R + + S S DE + S S P+ HK P
Sbjct: 428 GSVRSSVSAAAKEQR-----RRASSLPSSCAQSVASQDEYEQSGSSVMSSPVRLHKLAP 481
>08_02_0806 +
21403911-21404203,21406377-21406507,21406851-21406963,
21407478-21407594,21407611-21407803,21407890-21408105,
21408272-21408909
Length = 566
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = -2
Query: 239 RRGAA*RQWRHLAPHPRAQAAALSGTLSCHSTRHMSFAISPLPYRGPAPRGWQLYSYETK 60
+R A WR P + A L L+ S + + FAI P +P Y Y
Sbjct: 43 QRTGAPTGWRRALPVDTPETAYLKAKLAAESFQPLHFAICPFRVDATSPSTLVAYPYNF- 101
Query: 59 HVWPK 45
H++P+
Sbjct: 102 HLFPR 106
>05_07_0116 -
27785083-27786123,27786201-27786278,27786364-27786976,
27787128-27787213,27787316-27787438,27787600-27787734,
27787930-27788019,27788796-27788981,27789560-27789661,
27789787-27789900,27790010-27790153,27790260-27790325,
27790895-27791056,27791668-27791916
Length = 1062
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = -3
Query: 637 EQADQLRAEWSRELARVEDEIATLRT-VLQSKIRQSSDLKR 518
E+ D LRAE + +L+ E+EIA L T + Q++I ++ + R
Sbjct: 674 EREDALRAELASQLSEKEEEIARLNTKINQTEIHATNLISR 714
>05_04_0172 +
18718661-18718930,18719410-18720252,18720326-18720354,
18720439-18720529,18720625-18720779,18721552-18721662,
18722579-18722645
Length = 521
Score = 29.5 bits (63), Expect = 2.5
Identities = 24/78 (30%), Positives = 36/78 (46%)
Frame = -3
Query: 412 TTAEKTSSIIGGITAGVSSKLGQMRNSESFRSIEERVGSAYENVKGKVAXRSNSTQSFDE 233
++A ++S GG A + GQ R R + +R+ S+ + R + T S D
Sbjct: 17 SSASASASASGGDEASKGNGKGQRRGRGRGRGLLQRLPSSSSS-----CFRGHGTPSRD- 70
Query: 232 ALRDASGATSPPIPEHKP 179
DAS A+SPP P P
Sbjct: 71 ---DASSASSPPPPPRPP 85
>02_01_0286 + 1921049-1921726
Length = 225
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 407 RREDVFDHRRHHGRRVQQARSDAQLGVFPLHRRTRR 300
RR+D RRH G R + G FP+ RR RR
Sbjct: 90 RRDDRGSWRRHSGGNAIGLRQERASGGFPVKRRRRR 125
>03_02_0395 - 8091389-8093119,8093637-8093720,8093754-8094773
Length = 944
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -3
Query: 640 PEQADQLRAEWSRELARVEDEIATLR 563
P ++DQL W R + +DE+A+L+
Sbjct: 61 PPESDQLARAWLRRVQEAQDEVASLK 86
>02_02_0403 - 9866122-9867231
Length = 369
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = -2
Query: 260 IELDSELRRGAA*RQWRHLAPH----PRAQAAALSGTLSCHSTRHMSFAI 123
+ L SE+ R AA R+ AP P A AAA++ L H RH+ F +
Sbjct: 52 VRLPSEVGRTAAALPLRYAAPQLLHRPDAAAAAVALKLRVHGRRHLVFYV 101
>10_05_0113 + 9280756-9283489,9283726-9284048,9284201-9284314
Length = 1056
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 529 PSFDGSCFAVQFSKSRFHLRHGLARDSIQRVTGL 630
PS G+C A+QF + +L HGL + ++ GL
Sbjct: 543 PSTLGNCLALQFLYLQANLLHGLIPKELNKLRGL 576
>09_05_0015 -
20083143-20083308,20083645-20084017,20084362-20084675,
20085164-20085512,20085678-20085837,20086307-20086618,
20086700-20086820,20087225-20087277
Length = 615
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 405 AVVFITDSVFWYTWLSLTFFKP*LTSSVI-SFHTVMPSLRFKSEL*RILLCSTVL 566
AV + SV++ W + ++F+P L SSV+ VM ++ F ILL VL
Sbjct: 276 AVAQVFSSVYFSAWSNRSYFRPLLFSSVVLLLGNVMYAMAFDLGSLTILLLGRVL 330
>05_07_0079 -
27539389-27539892,27540059-27540343,27540453-27540550,
27540951-27541042,27541155-27541259,27541360-27541567,
27542469-27542472,27542742-27542765,27545025-27546266
Length = 853
Score = 28.7 bits (61), Expect = 4.3
Identities = 24/109 (22%), Positives = 45/109 (41%)
Frame = -3
Query: 604 RELARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITEDVNQGLKNVKESQVYQKTE 425
+ L VE+E A +S R+ K++L + ++ +DV++ K VKE +T
Sbjct: 294 KALKHVEEENAGEEAAQESGKRKRG--KKQLAEDLMEQDIQDVSEKRKKVKEGTPAAETP 351
Query: 424 SVIKTTAEKTSSIIGGITAGVSSKLGQMRNSESFRSIEERVGSAYENVK 278
+ K EK+ + S + + + + + VG VK
Sbjct: 352 KISKKGKEKSKRALDKEGEDASVEEASNKKKKGKKEVVSDVGEKNSKVK 400
>03_06_0711 - 35682293-35682952
Length = 219
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = -3
Query: 250 TQSFDEALRDASGATSPPIPEHKPLP*AGH*AVTPHVTCHSLYRLSHTAA 101
+Q EA A+ + P PE PLP H PH + H+AA
Sbjct: 58 SQPPSEASSSAAALSPPAPPETSPLPAPSHSPPVPHSAAPEPSPMEHSAA 107
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 28.7 bits (61), Expect = 4.3
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 7/135 (5%)
Frame = -3
Query: 556 LQSKIRQSSDLKRKLGITVWKEITEDVNQGLKNV-KESQVYQKTESVIKTTAEK--TSSI 386
+QS+ +++ DL +KLGI V ++ E N G KN E +S ++ EK +S++
Sbjct: 308 VQSRYKKADDLCQKLGIHVERQ--EQPNHGPKNSGSEMHGSFGPDSANASSFEKGQSSAV 365
Query: 385 IGGITAGVSSKL--GQMRNSESFRSIEERVGSAYENVKGKVAXRS--NSTQSFDEALRDA 218
+ G ++ G + + +IE+++ N + K+ + QS L
Sbjct: 366 MYSQENGGEHEIPNGVFSSRATKDNIEQKLEEHSTNKRQKLQNDVYVSRPQSPPPPLPSD 425
Query: 217 SGATSPPIPEHKPLP 173
+ PP PEH P P
Sbjct: 426 AFEQPPPPPEHPPPP 440
>11_01_0152 + 1270752-1270947,1271113-1271438,1271571-1272128
Length = 359
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = -2
Query: 215 WRHLAPHPRAQAAALSGTLSCHSTRHMSFAISPL--PYRGPAPRGWQLYSYETKHVW 51
W ++ P P + G S +S +H + + L R P P G Y + ++W
Sbjct: 300 WNNMPPPPPVAEGGVHGIGSSYSLQHQAAMVKALRDVIRLPNPLGMPQYKLDDAYLW 356
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -3
Query: 208 TSPPIPEHKPLP*AGH*AVTPH-VTCHSLYRLSHTAARPREAGNS 77
+SPP PE P P +GH P V S +H ++ P E +S
Sbjct: 813 SSPPTPEKSPSPPSGHEGTPPSPVKSSSPPPEAHVSSPPPEKSSS 857
>10_08_0472 - 18154797-18155048,18155332-18156318,18156424-18156546,
18156654-18156808,18157611-18157824,18158977-18159077,
18159162-18159285,18159584-18159655,18159897-18159961,
18160167-18160233,18160917-18161015,18161099-18161167,
18161286-18161409,18162507-18162566,18163111-18163634
Length = 1011
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = -3
Query: 598 LARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITEDV-NQGLKNVKESQVYQKTES 422
++R + I +R + ++ + S + L ++K+ E++ + G E +VY K +
Sbjct: 829 ISRGQIGIQQVRGLKEANFQLDSLIAEPLRENIYKKSVEEIFSSGTGEFDEEEVYVKIPA 888
Query: 421 VIKTTAEKTSSIIGGI 374
+ AEK SI+ I
Sbjct: 889 DLIINAEKAKSIVQDI 904
>06_01_0638 + 4640218-4640808
Length = 196
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -3
Query: 214 GATSPPIPEHKPLP*AGH*AVTPHVTCHSLYRLSHTAARPREAGNSTHTKR 62
GAT P PE K + A TP +T + R TAA PR ++T ++
Sbjct: 72 GATPAPAPERKGMAAASLPGATPTLT-PATERKGTTAASPRGTQSTTPARK 121
>02_01_0246 +
1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 27.9 bits (59), Expect = 7.6
Identities = 33/149 (22%), Positives = 61/149 (40%), Gaps = 6/149 (4%)
Frame = -3
Query: 628 DQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITEDVNQGLKNVKE 449
D++ AE + E + ED+ + + +++ Q + K E E+ + +
Sbjct: 261 DKVIAEHADEEVKAEDQQSKQADDMDAEVLQEEIPESKESDLPETEQAEEASVDDQEALN 320
Query: 448 SQVYQKTESVIKTTAEKTSSIIGGITAGVSSKLGQMRNSE-SFRSIEERVGSAYENVKGK 272
Q +T + AE+T T G + E + + EE+ + E +K
Sbjct: 321 QQPALETNDSLSVKAEETCHQSNVATCGEKTPEDDATTREPTVDTKEEQNQGSVEEMKDA 380
Query: 271 VAXRSNST--QS---FDEALRDASGATSP 200
A + T QS FDEA++D + T+P
Sbjct: 381 EAVDTEETVQQSSVAFDEAIQDHAATTNP 409
>01_07_0334 -
42818738-42818879,42818987-42819120,42819220-42819326,
42819413-42819509,42819661-42819840,42820278-42820345,
42820576-42820633,42820794-42820991
Length = 327
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = -3
Query: 658 ELAGXTPEQADQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITE 482
+LAG P ADQL + E AR D+ A+ + Q+ +L L + +EI E
Sbjct: 244 KLAGGCPSLADQLNVDAFLEQARSYDKAASNPVGWYIRNAQTRELSHPLPVMRAREIDE 302
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,231,124
Number of Sequences: 37544
Number of extensions: 325079
Number of successful extensions: 1128
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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