Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1371
(660 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68105-1|CAA92122.2| 195|Caenorhabditis elegans Hypothetical pr... 87 1e-17
U40946-4|AAA81726.1| 414|Caenorhabditis elegans Hypothetical pr... 33 0.18
AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 30 1.3
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 30 1.7
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 30 1.7
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 30 1.7
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 30 1.7
AC024812-1|AAF59552.2| 364|Caenorhabditis elegans Hypothetical ... 30 1.7
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z98866-16|CAB11565.2| 1159|Caenorhabditis elegans Hypothetical p... 28 5.1
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 28 5.1
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 28 5.1
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 28 5.1
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 28 5.1
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 28 5.1
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 28 5.1
AF016439-4|AAV28339.1| 489|Caenorhabditis elegans Hypothetical ... 28 5.1
AF016439-3|AAB65899.2| 467|Caenorhabditis elegans Hypothetical ... 28 5.1
AL110487-2|CAB54425.1| 445|Caenorhabditis elegans Hypothetical ... 28 6.8
>Z68105-1|CAA92122.2| 195|Caenorhabditis elegans Hypothetical
protein F13E6.1 protein.
Length = 195
Score = 86.6 bits (205), Expect = 1e-17
Identities = 51/142 (35%), Positives = 77/142 (54%)
Frame = -3
Query: 601 ELARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITEDVNQGLKNVKESQVYQKTES 422
EL + E+EI+TL+ VL ++ + +++LKRKLG+T + E+++D+N+ LK V ++ YQKT
Sbjct: 67 ELDKTEEEISTLKQVLSARQKHAAELKRKLGLTPFSELSQDINRSLKTVTDTDAYQKTAE 126
Query: 421 VIKTTAEKTSSIIGGITAGVSSKLGQMRNSESFRSIEERVGSAYENVKGKVAXRSNSTQS 242
V T++ V K MRNS F+S E ++GSA N K S S
Sbjct: 127 VAAATSDT-----------VKEKWNDMRNSSLFKSFESKLGSALNNAK---MAASTSIDH 172
Query: 241 FDEALRDASGATSPPIPEHKPL 176
A R S +P E KP+
Sbjct: 173 LAGAARGPSQTGTPVAEEAKPI 194
>U40946-4|AAA81726.1| 414|Caenorhabditis elegans Hypothetical
protein W05H9.1 protein.
Length = 414
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/86 (22%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Frame = -3
Query: 628 DQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRK---LGITVWKEITEDVNQGLKN 458
++ + + + L++V D + L+ + ++ ++ K+K I WKE+++ V + +++
Sbjct: 59 EETQKKLNETLSKVSDAVKQRADELEKEKQEKAEAKKKEAEAAIEKWKEVSQQVGEFVES 118
Query: 457 V------KESQVYQKTESVIKTTAEK 398
V KE + QK + +KT +K
Sbjct: 119 VKEKKQAKEQEKQQKIDDFVKTFTDK 144
>AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = -3
Query: 484 EDVNQGLKNVKESQVYQKTESVIKTTAEKTSSIIGGITAGVSSKL---GQMRNSESFRSI 314
ED + + N+K TES IKT++ K S+I + VS K+ G N +S +S
Sbjct: 660 EDKIELVDNIKTDNTTSNTESNIKTSSIKESNIETS-SLKVSKKIEGSGNKMNKKSKKSD 718
Query: 313 EERVGSAYEN 284
++++ A N
Sbjct: 719 DKKISKANNN 728
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -3
Query: 637 EQADQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRK 515
EQ D RAEWS E R+E T LQ ++++ D+ ++
Sbjct: 867 EQNDGDRAEWSNERNRLESSKNEAVTELQERVQKLEDVVKE 907
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -3
Query: 637 EQADQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRK 515
EQ D RAEWS E R+E T LQ ++++ D+ ++
Sbjct: 867 EQNDGDRAEWSNERNRLESSKNEAVTELQERVQKLEDVVKE 907
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -3
Query: 637 EQADQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRK 515
EQ D RAEWS E R+E T LQ ++++ D+ ++
Sbjct: 627 EQNDGDRAEWSNERNRLESSKNEAVTELQERVQKLEDVVKE 667
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -3
Query: 637 EQADQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRK 515
EQ D RAEWS E R+E T LQ ++++ D+ ++
Sbjct: 867 EQNDGDRAEWSNERNRLESSKNEAVTELQERVQKLEDVVKE 907
>AC024812-1|AAF59552.2| 364|Caenorhabditis elegans Hypothetical
protein Y54E10BR.4 protein.
Length = 364
Score = 29.9 bits (64), Expect = 1.7
Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 1/137 (0%)
Frame = -3
Query: 640 PEQADQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITEDVNQGLK 461
P+ D+LR+ +R+L TLR Q+ +R D + G + D+
Sbjct: 35 PQILDELRSSAARKLWNTLPFEVTLREPTQTALRAVIDASKTTGDFQSLSMV-DIKMIAL 93
Query: 460 NVKESQVYQKTESVIKTTAEKTSSIIGGITAGVSS-KLGQMRNSESFRSIEERVGSAYEN 284
+ Y V +TT + I ++A V +G+ IEE S ++
Sbjct: 94 TYDLHRQYVAENDVAETTEDDEKKNIEDLSAKVEQVTVGENTEDTKEEEIEENEESE-DS 152
Query: 283 VKGKVAXRSNSTQSFDE 233
+ + S S++SFDE
Sbjct: 153 AVSEGSESSESSESFDE 169
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical
protein F45E4.4 protein.
Length = 2361
Score = 28.7 bits (61), Expect = 3.9
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = -3
Query: 568 LRTVLQSKIRQSSDLKRKLGITVWKEITEDVNQ-GLKNV--KESQ-VYQKTESVIKTTAE 401
L T + IRQ S + K+ + E ++ + GLKN K +Q V T+SVIK
Sbjct: 346 LTTEEKEHIRQMSLMAEKMDEEILDEQSKPKSTFGLKNFFGKATQSVMHATDSVIKNVQN 405
Query: 400 KTSSIIGGITAGVSSKLGQMRNSESFRSIEE 308
++ + G+T + Q S S +E
Sbjct: 406 QSKQSLSGLTQEELDNIAQATESAQQESKQE 436
>Z98866-16|CAB11565.2| 1159|Caenorhabditis elegans Hypothetical
protein Y49E10.19 protein.
Length = 1159
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = -3
Query: 340 RNSESFRSIEERVGSAYENVKGKVAXRSNSTQSFDEALRDASGA--TSPPIPEHKPLP*A 167
+++ S +++ E + S ++ + + + F+E L+ +S A T+PP P P+P
Sbjct: 373 KSTSSPKTLSESIFSPSKSAAVEGSIATTRRLQFEEKLKKSSSANVTAPPAPTSAPVPTP 432
Query: 166 GH*A-VTPHVTCHSLYRLSHTAA 101
H A + P V S +H A
Sbjct: 433 RHVAPLAPTVAQQSHLTPNHRHA 455
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 28.3 bits (60), Expect = 5.1
Identities = 26/140 (18%), Positives = 58/140 (41%), Gaps = 1/140 (0%)
Frame = -3
Query: 658 ELAGXTPEQADQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITED 479
E+ ++ ++L A + LA+ E +I + + + L E +
Sbjct: 2742 EMNRAATDELNKLAARAGKRLAQREKKITETEDEIDKLHADADQIVGALEAIAKDEALQG 2801
Query: 478 VNQGLKNVKE-SQVYQKTESVIKTTAEKTSSIIGGITAGVSSKLGQMRNSESFRSIEERV 302
L + K+ S+ ++ + +K EK + + + G +++ S+ ++V
Sbjct: 2802 APSQLLDPKQVSEKVRQLKESLKPVGEKMDAFNTDCKLLIKTA-GPESDTKELDSLLKKV 2860
Query: 301 GSAYENVKGKVAXRSNSTQS 242
G AY +V GKV+ + S +
Sbjct: 2861 GDAYSDVVGKVSDKEMSVDA 2880
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 28.3 bits (60), Expect = 5.1
Identities = 26/140 (18%), Positives = 58/140 (41%), Gaps = 1/140 (0%)
Frame = -3
Query: 658 ELAGXTPEQADQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITED 479
E+ ++ ++L A + LA+ E +I + + + L E +
Sbjct: 2742 EMNRAATDELNKLAARAGKRLAQREKKITETEDEIDKLHADADQIVGALEAIAKDEALQG 2801
Query: 478 VNQGLKNVKE-SQVYQKTESVIKTTAEKTSSIIGGITAGVSSKLGQMRNSESFRSIEERV 302
L + K+ S+ ++ + +K EK + + + G +++ S+ ++V
Sbjct: 2802 APSQLLDPKQVSEKVRQLKESLKPVGEKMDAFNTDCKLLIKTA-GPESDTKELDSLLKKV 2860
Query: 301 GSAYENVKGKVAXRSNSTQS 242
G AY +V GKV+ + S +
Sbjct: 2861 GDAYSDVVGKVSDKEMSVDA 2880
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 28.3 bits (60), Expect = 5.1
Identities = 26/140 (18%), Positives = 58/140 (41%), Gaps = 1/140 (0%)
Frame = -3
Query: 658 ELAGXTPEQADQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITED 479
E+ ++ ++L A + LA+ E +I + + + L E +
Sbjct: 2197 EMNRAATDELNKLAARAGKRLAQREKKITETEDEIDKLHADADQIVGALEAIAKDEALQG 2256
Query: 478 VNQGLKNVKE-SQVYQKTESVIKTTAEKTSSIIGGITAGVSSKLGQMRNSESFRSIEERV 302
L + K+ S+ ++ + +K EK + + + G +++ S+ ++V
Sbjct: 2257 APSQLLDPKQVSEKVRQLKESLKPVGEKMDAFNTDCKLLIKTA-GPESDTKELDSLLKKV 2315
Query: 301 GSAYENVKGKVAXRSNSTQS 242
G AY +V GKV+ + S +
Sbjct: 2316 GDAYSDVVGKVSDKEMSVDA 2335
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 28.3 bits (60), Expect = 5.1
Identities = 26/140 (18%), Positives = 58/140 (41%), Gaps = 1/140 (0%)
Frame = -3
Query: 658 ELAGXTPEQADQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITED 479
E+ ++ ++L A + LA+ E +I + + + L E +
Sbjct: 2742 EMNRAATDELNKLAARAGKRLAQREKKITETEDEIDKLHADADQIVGALEAIAKDEALQG 2801
Query: 478 VNQGLKNVKE-SQVYQKTESVIKTTAEKTSSIIGGITAGVSSKLGQMRNSESFRSIEERV 302
L + K+ S+ ++ + +K EK + + + G +++ S+ ++V
Sbjct: 2802 APSQLLDPKQVSEKVRQLKESLKPVGEKMDAFNTDCKLLIKTA-GPESDTKELDSLLKKV 2860
Query: 301 GSAYENVKGKVAXRSNSTQS 242
G AY +V GKV+ + S +
Sbjct: 2861 GDAYSDVVGKVSDKEMSVDA 2880
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 28.3 bits (60), Expect = 5.1
Identities = 26/140 (18%), Positives = 58/140 (41%), Gaps = 1/140 (0%)
Frame = -3
Query: 658 ELAGXTPEQADQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITED 479
E+ ++ ++L A + LA+ E +I + + + L E +
Sbjct: 2742 EMNRAATDELNKLAARAGKRLAQREKKITETEDEIDKLHADADQIVGALEAIAKDEALQG 2801
Query: 478 VNQGLKNVKE-SQVYQKTESVIKTTAEKTSSIIGGITAGVSSKLGQMRNSESFRSIEERV 302
L + K+ S+ ++ + +K EK + + + G +++ S+ ++V
Sbjct: 2802 APSQLLDPKQVSEKVRQLKESLKPVGEKMDAFNTDCKLLIKTA-GPESDTKELDSLLKKV 2860
Query: 301 GSAYENVKGKVAXRSNSTQS 242
G AY +V GKV+ + S +
Sbjct: 2861 GDAYSDVVGKVSDKEMSVDA 2880
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 28.3 bits (60), Expect = 5.1
Identities = 26/140 (18%), Positives = 58/140 (41%), Gaps = 1/140 (0%)
Frame = -3
Query: 658 ELAGXTPEQADQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITED 479
E+ ++ ++L A + LA+ E +I + + + L E +
Sbjct: 2197 EMNRAATDELNKLAARAGKRLAQREKKITETEDEIDKLHADADQIVGALEAIAKDEALQG 2256
Query: 478 VNQGLKNVKE-SQVYQKTESVIKTTAEKTSSIIGGITAGVSSKLGQMRNSESFRSIEERV 302
L + K+ S+ ++ + +K EK + + + G +++ S+ ++V
Sbjct: 2257 APSQLLDPKQVSEKVRQLKESLKPVGEKMDAFNTDCKLLIKTA-GPESDTKELDSLLKKV 2315
Query: 301 GSAYENVKGKVAXRSNSTQS 242
G AY +V GKV+ + S +
Sbjct: 2316 GDAYSDVVGKVSDKEMSVDA 2335
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.3 bits (60), Expect = 5.1
Identities = 26/140 (18%), Positives = 58/140 (41%), Gaps = 1/140 (0%)
Frame = -3
Query: 658 ELAGXTPEQADQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITED 479
E+ ++ ++L A + LA+ E +I + + + L E +
Sbjct: 2742 EMNRAATDELNKLAARAGKRLAQREKKITETEDEIDKLHADADQIVGALEAIAKDEALQG 2801
Query: 478 VNQGLKNVKE-SQVYQKTESVIKTTAEKTSSIIGGITAGVSSKLGQMRNSESFRSIEERV 302
L + K+ S+ ++ + +K EK + + + G +++ S+ ++V
Sbjct: 2802 APSQLLDPKQVSEKVRQLKESLKPVGEKMDAFNTDCKLLIKTA-GPESDTKELDSLLKKV 2860
Query: 301 GSAYENVKGKVAXRSNSTQS 242
G AY +V GKV+ + S +
Sbjct: 2861 GDAYSDVVGKVSDKEMSVDA 2880
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.3 bits (60), Expect = 5.1
Identities = 26/140 (18%), Positives = 58/140 (41%), Gaps = 1/140 (0%)
Frame = -3
Query: 658 ELAGXTPEQADQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITED 479
E+ ++ ++L A + LA+ E +I + + + L E +
Sbjct: 2742 EMNRAATDELNKLAARAGKRLAQREKKITETEDEIDKLHADADQIVGALEAIAKDEALQG 2801
Query: 478 VNQGLKNVKE-SQVYQKTESVIKTTAEKTSSIIGGITAGVSSKLGQMRNSESFRSIEERV 302
L + K+ S+ ++ + +K EK + + + G +++ S+ ++V
Sbjct: 2802 APSQLLDPKQVSEKVRQLKESLKPVGEKMDAFNTDCKLLIKTA-GPESDTKELDSLLKKV 2860
Query: 301 GSAYENVKGKVAXRSNSTQS 242
G AY +V GKV+ + S +
Sbjct: 2861 GDAYSDVVGKVSDKEMSVDA 2880
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.3 bits (60), Expect = 5.1
Identities = 26/140 (18%), Positives = 58/140 (41%), Gaps = 1/140 (0%)
Frame = -3
Query: 658 ELAGXTPEQADQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITED 479
E+ ++ ++L A + LA+ E +I + + + L E +
Sbjct: 2197 EMNRAATDELNKLAARAGKRLAQREKKITETEDEIDKLHADADQIVGALEAIAKDEALQG 2256
Query: 478 VNQGLKNVKE-SQVYQKTESVIKTTAEKTSSIIGGITAGVSSKLGQMRNSESFRSIEERV 302
L + K+ S+ ++ + +K EK + + + G +++ S+ ++V
Sbjct: 2257 APSQLLDPKQVSEKVRQLKESLKPVGEKMDAFNTDCKLLIKTA-GPESDTKELDSLLKKV 2315
Query: 301 GSAYENVKGKVAXRSNSTQS 242
G AY +V GKV+ + S +
Sbjct: 2316 GDAYSDVVGKVSDKEMSVDA 2335
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 28.3 bits (60), Expect = 5.1
Identities = 26/140 (18%), Positives = 58/140 (41%), Gaps = 1/140 (0%)
Frame = -3
Query: 658 ELAGXTPEQADQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITED 479
E+ ++ ++L A + LA+ E +I + + + L E +
Sbjct: 2742 EMNRAATDELNKLAARAGKRLAQREKKITETEDEIDKLHADADQIVGALEAIAKDEALQG 2801
Query: 478 VNQGLKNVKE-SQVYQKTESVIKTTAEKTSSIIGGITAGVSSKLGQMRNSESFRSIEERV 302
L + K+ S+ ++ + +K EK + + + G +++ S+ ++V
Sbjct: 2802 APSQLLDPKQVSEKVRQLKESLKPVGEKMDAFNTDCKLLIKTA-GPESDTKELDSLLKKV 2860
Query: 301 GSAYENVKGKVAXRSNSTQS 242
G AY +V GKV+ + S +
Sbjct: 2861 GDAYSDVVGKVSDKEMSVDA 2880
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 28.3 bits (60), Expect = 5.1
Identities = 26/140 (18%), Positives = 58/140 (41%), Gaps = 1/140 (0%)
Frame = -3
Query: 658 ELAGXTPEQADQLRAEWSRELARVEDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITED 479
E+ ++ ++L A + LA+ E +I + + + L E +
Sbjct: 2742 EMNRAATDELNKLAARAGKRLAQREKKITETEDEIDKLHADADQIVGALEAIAKDEALQG 2801
Query: 478 VNQGLKNVKE-SQVYQKTESVIKTTAEKTSSIIGGITAGVSSKLGQMRNSESFRSIEERV 302
L + K+ S+ ++ + +K EK + + + G +++ S+ ++V
Sbjct: 2802 APSQLLDPKQVSEKVRQLKESLKPVGEKMDAFNTDCKLLIKTA-GPESDTKELDSLLKKV 2860
Query: 301 GSAYENVKGKVAXRSNSTQS 242
G AY +V GKV+ + S +
Sbjct: 2861 GDAYSDVVGKVSDKEMSVDA 2880
>AF016439-4|AAV28339.1| 489|Caenorhabditis elegans Hypothetical
protein R02F11.3b protein.
Length = 489
Score = 28.3 bits (60), Expect = 5.1
Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 10/105 (9%)
Frame = -3
Query: 466 LKNVKESQVYQKTESVIKTTAEKTSSIIGGITAGVSSKLG-QMRNSESFRSIEERVGSAY 290
L+++ SQ + + + + + +TAG ++ L Q +N++ ++
Sbjct: 33 LRSISLSQAPSAPRDLENGNGQTSCAELHKLTAGSTTSLSSQSKNAKKVNKFYKKQNELL 92
Query: 289 ENVKG---------KVAXRSNSTQSFDEALRDASGATSPPIPEHK 182
EN K + R+ S + D+A D A PPIPE K
Sbjct: 93 ENFKNDSEQIEQFNRTRRRTTSKEEDDDA--DVIAAIPPPIPEEK 135
>AF016439-3|AAB65899.2| 467|Caenorhabditis elegans Hypothetical
protein R02F11.3a protein.
Length = 467
Score = 28.3 bits (60), Expect = 5.1
Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 10/105 (9%)
Frame = -3
Query: 466 LKNVKESQVYQKTESVIKTTAEKTSSIIGGITAGVSSKLG-QMRNSESFRSIEERVGSAY 290
L+++ SQ + + + + + +TAG ++ L Q +N++ ++
Sbjct: 33 LRSISLSQAPSAPRDLENGNGQTSCAELHKLTAGSTTSLSSQSKNAKKVNKFYKKQNELL 92
Query: 289 ENVKG---------KVAXRSNSTQSFDEALRDASGATSPPIPEHK 182
EN K + R+ S + D+A D A PPIPE K
Sbjct: 93 ENFKNDSEQIEQFNRTRRRTTSKEEDDDA--DVIAAIPPPIPEEK 135
>AL110487-2|CAB54425.1| 445|Caenorhabditis elegans Hypothetical
protein Y39E4B.2 protein.
Length = 445
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -3
Query: 541 RQSSDLKRKLGITVWKEITEDVNQGLKNVKES 446
++ S LK KLGIT W ++ + + + K +K S
Sbjct: 204 KEYSRLKMKLGITSWMKLKDPIEELKKIIKTS 235
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,164,426
Number of Sequences: 27780
Number of extensions: 248805
Number of successful extensions: 891
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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