Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1363
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075500-1|AAL68310.1|  293|Drosophila melanogaster RE51713p pro...   140   2e-33
AE014297-321|AAF51976.1|  293|Drosophila melanogaster CG1245-PA ...   140   2e-33
AE014297-1063|AAF54473.3|  640|Drosophila melanogaster CG12807-P...    30   2.6  
AY058280-1|AAL13509.1|  429|Drosophila melanogaster GH03217p pro...    29   6.1  
AE014296-2046|AAN12246.1|  429|Drosophila melanogaster CG32095-P...    29   6.1  

>AY075500-1|AAL68310.1|  293|Drosophila melanogaster RE51713p
           protein.
          Length = 293

 Score =  140 bits (339), Expect = 2e-33
 Identities = 62/102 (60%), Positives = 81/102 (79%), Gaps = 3/102 (2%)
 Frame = -3

Query: 698 LLMEWVMVKGYGETL---DLWTESRHHVFRKVTENAHAAMLHFYSPTLPELAVRSFMTWL 528
           +L+EWV VKG+ E L   DLW ESR+ VFRKV ++AH+AMLHF+SPTLP+LAV+S++TWL
Sbjct: 192 VLIEWVTVKGFDEPLEHDDLWAESRYEVFRKVQDHAHSAMLHFFSPTLPDLAVKSYITWL 251

Query: 527 HSYVNLFSEPCKRCSCHLHHTSLLPPAWRDFRTLETFHDECK 402
           +S+V LF EPCKRC   +   + LPP WRD RTLE FH++C+
Sbjct: 252 NSHVKLFLEPCKRCGKFV--VNGLPPTWRDLRTLEPFHEDCR 291


>AE014297-321|AAF51976.1|  293|Drosophila melanogaster CG1245-PA
           protein.
          Length = 293

 Score =  140 bits (339), Expect = 2e-33
 Identities = 62/102 (60%), Positives = 81/102 (79%), Gaps = 3/102 (2%)
 Frame = -3

Query: 698 LLMEWVMVKGYGETL---DLWTESRHHVFRKVTENAHAAMLHFYSPTLPELAVRSFMTWL 528
           +L+EWV VKG+ E L   DLW ESR+ VFRKV ++AH+AMLHF+SPTLP+LAV+S++TWL
Sbjct: 192 VLIEWVTVKGFDEPLEHDDLWAESRYEVFRKVQDHAHSAMLHFFSPTLPDLAVKSYITWL 251

Query: 527 HSYVNLFSEPCKRCSCHLHHTSLLPPAWRDFRTLETFHDECK 402
           +S+V LF EPCKRC   +   + LPP WRD RTLE FH++C+
Sbjct: 252 NSHVKLFLEPCKRCGKFV--VNGLPPTWRDLRTLEPFHEDCR 291


>AE014297-1063|AAF54473.3|  640|Drosophila melanogaster CG12807-PA
           protein.
          Length = 640

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 16/32 (50%), Positives = 19/32 (59%)
 Frame = +2

Query: 92  YLKIKQLVHTQFKLYILVQYYLEFMML*YSTL 187
           YL  +Q+VHT FK+Y  V YY  F  L  S L
Sbjct: 451 YLGNQQVVHTTFKVYNAVLYYKYFEHLKMSVL 482


>AY058280-1|AAL13509.1|  429|Drosophila melanogaster GH03217p
           protein.
          Length = 429

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 584 HFYSPTLPELAVRSFMTWLHSYVNLFSEPCKRCS 483
           HF+   +PEL+   F+  LH     F   CK+ S
Sbjct: 93  HFFEHVIPELSEEDFLNTLHVTRGTFETLCKQLS 126


>AE014296-2046|AAN12246.1|  429|Drosophila melanogaster CG32095-PA
           protein.
          Length = 429

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 584 HFYSPTLPELAVRSFMTWLHSYVNLFSEPCKRCS 483
           HF+   +PEL+   F+  LH     F   CK+ S
Sbjct: 93  HFFEHVIPELSEEDFLNTLHVTRGTFETLCKQLS 126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,106,867
Number of Sequences: 53049
Number of extensions: 612178
Number of successful extensions: 1068
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1064
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)