Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1356
         (650 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC151227-1|AAI51228.1| 1606|Homo sapiens HECT, C2 and WW domain ...    30   6.2  
AB048365-1|BAB13352.1| 1585|Homo sapiens NEDD4-like ubiquitin li...    30   6.2  
AB002320-1|BAA20780.2| 1614|Homo sapiens KIAA0322 protein.             30   6.2  

>BC151227-1|AAI51228.1| 1606|Homo sapiens HECT, C2 and WW domain
            containing E3 ubiquitin protein ligase 1 protein.
          Length = 1606

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
 Frame = -3

Query: 288  QKCSLLFSY*MLK*ISLIQMCTL---NFNVFIVKKSAMNCIKH*TY*IKLHANNFENYCY 118
            QK +LL     +K I+  +  T+   N++ + V  S+  C+KH    ++  A NFE Y +
Sbjct: 944  QKITLLLQSPAVKFITNPEFFTVLHANYSAYRVFTSS-TCLKHMILKVRRDARNFERYQH 1002

Query: 117  -RKKINFNESFSNVFIDL 67
             R  +NF   F++  ++L
Sbjct: 1003 NRDLVNFINMFADTRLEL 1020


>AB048365-1|BAB13352.1| 1585|Homo sapiens NEDD4-like ubiquitin ligase
            1 protein.
          Length = 1585

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
 Frame = -3

Query: 288  QKCSLLFSY*MLK*ISLIQMCTL---NFNVFIVKKSAMNCIKH*TY*IKLHANNFENYCY 118
            QK +LL     +K I+  +  T+   N++ + V  S+  C+KH    ++  A NFE Y +
Sbjct: 923  QKITLLLQSPAVKFITNPEFFTVLHANYSAYRVFTSS-TCLKHMILKVRRDARNFERYQH 981

Query: 117  -RKKINFNESFSNVFIDL 67
             R  +NF   F++  ++L
Sbjct: 982  NRDLVNFINMFADTRLEL 999


>AB002320-1|BAA20780.2| 1614|Homo sapiens KIAA0322 protein.
          Length = 1614

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
 Frame = -3

Query: 288  QKCSLLFSY*MLK*ISLIQMCTL---NFNVFIVKKSAMNCIKH*TY*IKLHANNFENYCY 118
            QK +LL     +K I+  +  T+   N++ + V  S+  C+KH    ++  A NFE Y +
Sbjct: 952  QKITLLLQSPAVKFITNPEFFTVLHANYSAYRVFTSS-TCLKHMILKVRRDARNFERYQH 1010

Query: 117  -RKKINFNESFSNVFIDL 67
             R  +NF   F++  ++L
Sbjct: 1011 NRDLVNFINMFADTRLEL 1028


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,297,923
Number of Sequences: 237096
Number of extensions: 1501879
Number of successful extensions: 1705
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1705
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)