Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1355
         (710 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            27   0.77 
AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    25   1.8  
AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembran...    25   1.8  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    25   1.8  

>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 412 HNTNMAVKYDNNNLQMLDKDSCQVFLPS*HLFHE 311
           HN N+ V+Y   ++  +DK  C+       L HE
Sbjct: 347 HNLNLMVEYCEQDIITIDKQKCEAKDREEQLLHE 380


>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 8/31 (25%), Positives = 19/31 (61%)
 Frame = -3

Query: 420 YFVIIQIWRSNMTIIIYRCWIKIAVKSFCHL 328
           YF++  + +SN+  +++  W+ +A +   HL
Sbjct: 202 YFLLFSMVQSNLADVMFCSWLLLACEQLQHL 232


>AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 331

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 8/31 (25%), Positives = 19/31 (61%)
 Frame = -3

Query: 420 YFVIIQIWRSNMTIIIYRCWIKIAVKSFCHL 328
           YF++  + +SN+  +++  W+ +A +   HL
Sbjct: 55  YFLLFSMVQSNLADVMFCSWLLLACEQLQHL 85


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 8/31 (25%), Positives = 19/31 (61%)
 Frame = -3

Query: 420 YFVIIQIWRSNMTIIIYRCWIKIAVKSFCHL 328
           YF++  + +SN+  +++  W+ +A +   HL
Sbjct: 202 YFLLFSMVQSNLADVMFCSWLLLACEQLQHL 232


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,123
Number of Sequences: 2352
Number of extensions: 10020
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)