BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1348
(700 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 29 0.19
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 28 0.33
Z22930-4|CAA80516.1| 267|Anopheles gambiae Trypsinogen precurso... 24 5.3
U43500-1|AAA93303.1| 280|Anopheles gambiae a-CD36 protein. 24 5.3
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 24 5.3
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s... 23 7.0
AY578808-1|AAT07313.1| 458|Anopheles gambiae saxophone protein. 23 9.2
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 28.7 bits (61), Expect = 0.19
Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Frame = +2
Query: 161 SPATCICCSISLSTKLRRPQAIPHLMAPDWPEGPPPSTLHSTSTRF-CIPVNISGNNTC 334
+PA I + RP +PH P PP+T ST+ R C GN C
Sbjct: 683 APAPAISSRFGDNRPSWRPLIVPHATTTKTPTTTPPATTTSTTPRDPCYGKFNCGNGVC 741
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 27.9 bits (59), Expect = 0.33
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +2
Query: 212 RPQAIPHLMAPDWPEGPPPSTLHSTSTRF-CIPVNISGNNTC 334
RP +PH P PP+T ST+ R C GN C
Sbjct: 699 RPLIVPHATTTKTPTTTPPATTTSTTPRDPCYGKFNCGNGVC 740
>Z22930-4|CAA80516.1| 267|Anopheles gambiae Trypsinogen precursor
of ANTRYP7 protein.
Length = 267
Score = 23.8 bits (49), Expect = 5.3
Identities = 11/46 (23%), Positives = 19/46 (41%)
Frame = -2
Query: 351 DVQSREQVLFPLIFTGMQNRVDVECNVEGGGPSGQSGAIRWGIAWG 214
+ S E + ++ G Q C + GGP G + ++WG
Sbjct: 194 EAYSHEAITDRMLCAGYQQGGKDACQGDSGGPLVADGKLIGVVSWG 239
>U43500-1|AAA93303.1| 280|Anopheles gambiae a-CD36 protein.
Length = 280
Score = 23.8 bits (49), Expect = 5.3
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -2
Query: 684 GGSMWVNKDQLEQLLVEKISDLEYDNFKVVMERLVSLPY 568
G +W NK + +LL E + D D K + +++P+
Sbjct: 85 GSLLWKNKP-VRELLFEGVKDPLLDLLKTINSTSLNIPF 122
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 23.8 bits (49), Expect = 5.3
Identities = 12/38 (31%), Positives = 15/38 (39%)
Frame = +3
Query: 249 GRKVHHLLHYIPHPHGFAYQ*ILAGTTLVLSTEHHQNM 362
G HH H+ HPH Q + + EH NM
Sbjct: 179 GHSQHHHHHHHHHPHHSQQQHSASPRCYPMPPEHMYNM 216
>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
symporter protein.
Length = 1127
Score = 23.4 bits (48), Expect = 7.0
Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +2
Query: 359 YVISFLLIVILPVPGDLMVTSPLA--FFL 439
Y+++F++ V + + GDL + +PL FFL
Sbjct: 553 YILTFVISVAVILVGDLNMIAPLISNFFL 581
>AY578808-1|AAT07313.1| 458|Anopheles gambiae saxophone protein.
Length = 458
Score = 23.0 bits (47), Expect = 9.2
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 608 LSYSKSEIFSTNNCSS*SLFTHILP 682
L Y S++ S N+C+ L TH P
Sbjct: 206 LGYVGSDMTSRNSCTQLWLITHYYP 230
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 728,162
Number of Sequences: 2352
Number of extensions: 15079
Number of successful extensions: 28
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -