Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1348
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal... 143 6e-34
BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein. 143 6e-34
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 37 0.060
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 37 0.060
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 37 0.060
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 37 0.060
BC016158-1|AAH16158.1| 431|Homo sapiens DBF4B protein protein. 33 1.3
AF448801-1|AAM73808.1| 615|Homo sapiens Dbf4-related factor 1 p... 33 1.3
BC072681-1|AAH72681.1| 843|Homo sapiens OTUD7B protein protein. 31 5.2
AL590487-5|CAI12652.1| 427|Homo sapiens OTU domain containing 7... 31 5.2
AL590487-4|CAI12651.1| 843|Homo sapiens OTU domain containing 7... 31 5.2
AJ293573-1|CAB97494.1| 858|Homo sapiens zinc finger protein Cez... 31 5.2
BC020622-1|AAH20622.1| 427|Homo sapiens OTUD7B protein protein. 30 6.9
>BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal
protein S9 protein.
Length = 396
Score = 143 bits (346), Expect = 6e-34
Identities = 77/201 (38%), Positives = 120/201 (59%), Gaps = 1/201 (0%)
Frame = -2
Query: 681 GSMWVNKDQLEQLLVEKISDLEYDNFKVVMERLVSLPYSYRYKDFIEKFRKPLAVQKFAL 502
GS W+ K++LE++LVEK+SDL+Y F ++E+L++ ++F+++FR+ + ++
Sbjct: 196 GSRWLIKEELEEMLVEKLSDLDYMQFIRLLEKLLTSQCGAAEEEFVQRFRRSVTLESKKQ 255
Query: 501 EIPKPNYDEEGRAYITTYECLRKKARGDVTIRSPGTGKITINKKDIT-YFDDVQSREQVL 325
I YDE+G A+ + E RK A+ + + G+G+I +N D YF Q REQ++
Sbjct: 256 LIEPVQYDEQGMAFSKS-EGKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFPITQDREQLM 314
Query: 324 FPLIFTGMQNRVDVECNVEGGGPSGQSGAIRWGIAWGLRSFVDKDMLQQMQVAGLLTRDH 145
FP F + DV C V GGG S Q+GAIR +A L SFV +D ++ M+ AGLLT D
Sbjct: 315 FPFHFVDRLGKHDVTCTVSGGGRSAQAGAIRLAMAKALCSFVTEDEVEWMRQAGLLTTDP 374
Query: 144 RRRERKKAWSTWSKEEANMEK 82
R RERKK ++ + +K
Sbjct: 375 RVRERKKPGQEGARRKFTWKK 395
Score = 33.5 bits (73), Expect = 0.74
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -3
Query: 128 RKPGQPGARKKPTWKKR 78
+KPGQ GAR+K TWKKR
Sbjct: 380 KKPGQEGARRKFTWKKR 396
>BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein.
Length = 302
Score = 143 bits (346), Expect = 6e-34
Identities = 77/201 (38%), Positives = 120/201 (59%), Gaps = 1/201 (0%)
Frame = -2
Query: 681 GSMWVNKDQLEQLLVEKISDLEYDNFKVVMERLVSLPYSYRYKDFIEKFRKPLAVQKFAL 502
GS W+ K++LE++LVEK+SDL+Y F ++E+L++ ++F+++FR+ + ++
Sbjct: 102 GSRWLIKEELEEMLVEKLSDLDYMQFIRLLEKLLTSQCGAAEEEFVQRFRRSVTLESKKQ 161
Query: 501 EIPKPNYDEEGRAYITTYECLRKKARGDVTIRSPGTGKITINKKDIT-YFDDVQSREQVL 325
I YDE+G A+ + E RK A+ + + G+G+I +N D YF Q REQ++
Sbjct: 162 LIEPVQYDEQGMAFSKS-EGKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFPITQDREQLM 220
Query: 324 FPLIFTGMQNRVDVECNVEGGGPSGQSGAIRWGIAWGLRSFVDKDMLQQMQVAGLLTRDH 145
FP F + DV C V GGG S Q+GAIR +A L SFV +D ++ M+ AGLLT D
Sbjct: 221 FPFHFVDRLGKHDVTCTVSGGGRSAQAGAIRLAMAKALCSFVTEDEVEWMRQAGLLTTDP 280
Query: 144 RRRERKKAWSTWSKEEANMEK 82
R RERKK ++ + +K
Sbjct: 281 RVRERKKPGQEGARRKFTWKK 301
Score = 33.5 bits (73), Expect = 0.74
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -3
Query: 128 RKPGQPGARKKPTWKKR 78
+KPGQ GAR+K TWKKR
Sbjct: 286 KKPGQEGARRKFTWKKR 302
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 37.1 bits (82), Expect = 0.060
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 13/118 (11%)
Frame = -2
Query: 438 RKKARGDVTIRSPGTGKITINKKDITYFDDVQSREQVLFPLIFTGMQN--RVDVECNVEG 265
RKK V G G I +N + + + + ++L P++ G + VD+ V+G
Sbjct: 15 RKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKG 74
Query: 264 GGPSGQSGAIRWGIAWGL----RSFVD-------KDMLQQMQVAGLLTRDHRRRERKK 124
GG Q AIR I+ L + +VD KD+L Q LL D RR E KK
Sbjct: 75 GGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYD-RTLLVADPRRCESKK 131
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 37.1 bits (82), Expect = 0.060
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 13/118 (11%)
Frame = -2
Query: 438 RKKARGDVTIRSPGTGKITINKKDITYFDDVQSREQVLFPLIFTGMQN--RVDVECNVEG 265
RKK V G G I +N + + + + ++L P++ G + VD+ V+G
Sbjct: 15 RKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKG 74
Query: 264 GGPSGQSGAIRWGIAWGL----RSFVD-------KDMLQQMQVAGLLTRDHRRRERKK 124
GG Q AIR I+ L + +VD KD+L Q LL D RR E KK
Sbjct: 75 GGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYD-RTLLVADPRRCESKK 131
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 37.1 bits (82), Expect = 0.060
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 13/118 (11%)
Frame = -2
Query: 438 RKKARGDVTIRSPGTGKITINKKDITYFDDVQSREQVLFPLIFTGMQN--RVDVECNVEG 265
RKK V G G I +N + + + + ++L P++ G + VD+ V+G
Sbjct: 15 RKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKG 74
Query: 264 GGPSGQSGAIRWGIAWGL----RSFVD-------KDMLQQMQVAGLLTRDHRRRERKK 124
GG Q AIR I+ L + +VD KD+L Q LL D RR E KK
Sbjct: 75 GGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYD-RTLLVADPRRCESKK 131
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 37.1 bits (82), Expect = 0.060
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 13/118 (11%)
Frame = -2
Query: 438 RKKARGDVTIRSPGTGKITINKKDITYFDDVQSREQVLFPLIFTGMQN--RVDVECNVEG 265
RKK V G G I +N + + + + ++L P++ G + VD+ V+G
Sbjct: 15 RKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKG 74
Query: 264 GGPSGQSGAIRWGIAWGL----RSFVD-------KDMLQQMQVAGLLTRDHRRRERKK 124
GG Q AIR I+ L + +VD KD+L Q LL D RR E KK
Sbjct: 75 GGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYD-RTLLVADPRRCESKK 131
>BC016158-1|AAH16158.1| 431|Homo sapiens DBF4B protein protein.
Length = 431
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/74 (22%), Positives = 34/74 (45%)
Frame = -2
Query: 303 MQNRVDVECNVEGGGPSGQSGAIRWGIAWGLRSFVDKDMLQQMQVAGLLTRDHRRRERKK 124
+Q + + ++ GGG G S + +WG+R +M+ +Q L + ++++ KK
Sbjct: 149 LQKAIRNQGSISGGGSGGSSSLLTNARSWGVRILHVDEMMMHVQQLSLASLCVKKQQPKK 208
Query: 123 AWSTWSKEEANMEK 82
T E+ K
Sbjct: 209 PEGTCPAAESRTRK 222
>AF448801-1|AAM73808.1| 615|Homo sapiens Dbf4-related factor 1
protein.
Length = 615
Score = 32.7 bits (71), Expect = 1.3
Identities = 17/74 (22%), Positives = 34/74 (45%)
Frame = -2
Query: 303 MQNRVDVECNVEGGGPSGQSGAIRWGIAWGLRSFVDKDMLQQMQVAGLLTRDHRRRERKK 124
+Q + + ++ GGG G S + +WG+R +M+ +Q L + ++++ KK
Sbjct: 149 LQKAIRNQGSISGGGSGGSSSLLTNARSWGVRILHVDEMMMHVQQLSLASLCVKKQQPKK 208
Query: 123 AWSTWSKEEANMEK 82
T E+ K
Sbjct: 209 PEGTCPAAESRTRK 222
>BC072681-1|AAH72681.1| 843|Homo sapiens OTUD7B protein protein.
Length = 843
Score = 30.7 bits (66), Expect = 5.2
Identities = 13/62 (20%), Positives = 29/62 (46%)
Frame = -2
Query: 255 SGQSGAIRWGIAWGLRSFVDKDMLQQMQVAGLLTRDHRRRERKKAWSTWSKEEANMEKTL 76
+G + + G+ F D+D++ + + L+ + + K+ W W + + N E L
Sbjct: 189 TGDGNCLLHAASLGMWGFHDRDLMLRKALYALMEKGVEKEALKRRW-RWQQTQQNKESGL 247
Query: 75 IY 70
+Y
Sbjct: 248 VY 249
>AL590487-5|CAI12652.1| 427|Homo sapiens OTU domain containing 7B
protein.
Length = 427
Score = 30.7 bits (66), Expect = 5.2
Identities = 13/62 (20%), Positives = 29/62 (46%)
Frame = -2
Query: 255 SGQSGAIRWGIAWGLRSFVDKDMLQQMQVAGLLTRDHRRRERKKAWSTWSKEEANMEKTL 76
+G + + G+ F D+D++ + + L+ + + K+ W W + + N E L
Sbjct: 189 TGDGNCLLHAASLGMWGFHDRDLMLRKALYALMEKGVEKEALKRRW-RWQQTQQNKESGL 247
Query: 75 IY 70
+Y
Sbjct: 248 VY 249
>AL590487-4|CAI12651.1| 843|Homo sapiens OTU domain containing 7B
protein.
Length = 843
Score = 30.7 bits (66), Expect = 5.2
Identities = 13/62 (20%), Positives = 29/62 (46%)
Frame = -2
Query: 255 SGQSGAIRWGIAWGLRSFVDKDMLQQMQVAGLLTRDHRRRERKKAWSTWSKEEANMEKTL 76
+G + + G+ F D+D++ + + L+ + + K+ W W + + N E L
Sbjct: 189 TGDGNCLLHAASLGMWGFHDRDLMLRKALYALMEKGVEKEALKRRW-RWQQTQQNKESGL 247
Query: 75 IY 70
+Y
Sbjct: 248 VY 249
>AJ293573-1|CAB97494.1| 858|Homo sapiens zinc finger protein
Cezanne protein.
Length = 858
Score = 30.7 bits (66), Expect = 5.2
Identities = 13/62 (20%), Positives = 29/62 (46%)
Frame = -2
Query: 255 SGQSGAIRWGIAWGLRSFVDKDMLQQMQVAGLLTRDHRRRERKKAWSTWSKEEANMEKTL 76
+G + + G+ F D+D++ + + L+ + + K+ W W + + N E L
Sbjct: 204 TGDGNCLLHAASLGMWGFHDRDLMLRKALYALMEKGVEKEALKRRW-RWQQTQQNKESGL 262
Query: 75 IY 70
+Y
Sbjct: 263 VY 264
>BC020622-1|AAH20622.1| 427|Homo sapiens OTUD7B protein protein.
Length = 427
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/62 (20%), Positives = 29/62 (46%)
Frame = -2
Query: 255 SGQSGAIRWGIAWGLRSFVDKDMLQQMQVAGLLTRDHRRRERKKAWSTWSKEEANMEKTL 76
+G + + G+ F D+D++ + + L+ + + K+ W W + + N E L
Sbjct: 189 TGDGNCLLHAASLGMWGFHDRDLMLRKALYALMEKGVEKEALKRRW-RWQQTQQNEESGL 247
Query: 75 IY 70
+Y
Sbjct: 248 VY 249
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,777,618
Number of Sequences: 237096
Number of extensions: 2254620
Number of successful extensions: 5635
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5628
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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