Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1346
(640 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-3|CAA86312.1| 309|Caenorhabditis elegans Hypothetical pr... 238 3e-63
Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical pr... 235 3e-62
AF039046-12|AAB94215.1| 299|Caenorhabditis elegans Hydroxy-acyl... 180 8e-46
AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical ... 96 2e-20
AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical ... 96 2e-20
AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical ... 96 2e-20
Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical pr... 92 4e-19
Z81055-2|CAB02891.2| 437|Caenorhabditis elegans Hypothetical pr... 80 2e-15
Z81055-3|CAB02892.2| 434|Caenorhabditis elegans Hypothetical pr... 76 2e-14
AC024201-11|ABQ13050.1| 284|Caenorhabditis elegans Hypothetical... 43 2e-04
AC024201-10|ABQ13051.1| 281|Caenorhabditis elegans Hypothetical... 43 2e-04
U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical pr... 27 8.6
U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z46240-3|CAA86312.1| 309|Caenorhabditis elegans Hypothetical
protein B0272.3 protein.
Length = 309
Score = 238 bits (582), Expect = 3e-63
Identities = 105/160 (65%), Positives = 132/160 (82%)
Frame = -2
Query: 639 LSINEIASVVKRKDKFGGLHFFNPVPVMRLLEVVKGSETSEATYKTMMEWGKSVGKTCIT 460
L + +I +K K +FGGLHFFNPVP+M+LLEVV+ +ETS+AT+ ++++GK+VGKT +
Sbjct: 146 LRLADIGLNLKDKSRFGGLHFFNPVPMMKLLEVVRHTETSDATFNQLVDYGKTVGKTTVA 205
Query: 459 CKDTPGFVVNRLLVPYICEAIRLYERGDASARDIDIAMKLGAGYPMGPLELADYVGLDTN 280
CKDTPGF+VNRLLVPY+ EA+RLYERGDAS DID+AMKLGAGYPMGP EL+DYVGLDT
Sbjct: 206 CKDTPGFIVNRLLVPYMFEALRLYERGDASMEDIDVAMKLGAGYPMGPFELSDYVGLDTC 265
Query: 279 KFILDGWHKKFPDQQLFKPIPLLEKLVAEGKLGVKTGEGF 160
KFI+DGWH ++P++ F P PLL LV GK G K+GEGF
Sbjct: 266 KFIMDGWHAQYPEEVAFTPSPLLNSLVDSGKNGRKSGEGF 305
>Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical
protein F54C8.1 protein.
Length = 298
Score = 235 bits (574), Expect = 3e-62
Identities = 101/158 (63%), Positives = 132/158 (83%)
Frame = -2
Query: 633 INEIASVVKRKDKFGGLHFFNPVPVMRLLEVVKGSETSEATYKTMMEWGKSVGKTCITCK 454
+ ++A ++ K +FGGLHFFNPVPVM+LLEV++ +TS+ TY T++++G +VGKT + CK
Sbjct: 136 LEDVAKGLQDKTRFGGLHFFNPVPVMKLLEVIRSDDTSDETYATLIKFGTAVGKTTVACK 195
Query: 453 DTPGFVVNRLLVPYICEAIRLYERGDASARDIDIAMKLGAGYPMGPLELADYVGLDTNKF 274
D+PGF+VNRLL+PY EA R+YERGDAS DID AMKLGAG+PMGP ELADY+GLDT KF
Sbjct: 196 DSPGFIVNRLLIPYFFEAARMYERGDASMTDIDEAMKLGAGHPMGPFELADYIGLDTVKF 255
Query: 273 ILDGWHKKFPDQQLFKPIPLLEKLVAEGKLGVKTGEGF 160
++DGW K+P+ QLF+ PL++KLVAEGKLG KTG+GF
Sbjct: 256 VMDGWAAKYPEVQLFEASPLVDKLVAEGKLGRKTGDGF 293
>AF039046-12|AAB94215.1| 299|Caenorhabditis elegans
Hydroxy-acyl-coa dehydrogenaseprotein 1 protein.
Length = 299
Score = 180 bits (438), Expect = 8e-46
Identities = 83/160 (51%), Positives = 110/160 (68%)
Frame = -2
Query: 639 LSINEIASVVKRKDKFGGLHFFNPVPVMRLLEVVKGSETSEATYKTMMEWGKSVGKTCIT 460
L ++++ V++ F GLHFFNPVPVM+L+EVV ETS T + + K + K +
Sbjct: 137 LKLSQMLPVIQNPALFAGLHFFNPVPVMKLVEVVSTDETSPETTNFLFNFCKEIKKLPVA 196
Query: 459 CKDTPGFVVNRLLVPYICEAIRLYERGDASARDIDIAMKLGAGYPMGPLELADYVGLDTN 280
KDTPGF+VNRLL+PY+ ++IR+ ERGDA+ DID AM+ G YPMGP+EL DYVGLD
Sbjct: 197 AKDTPGFIVNRLLIPYLMDSIRMLERGDATKEDIDTAMRFGTSYPMGPIELCDYVGLDVL 256
Query: 279 KFILDGWHKKFPDQQLFKPIPLLEKLVAEGKLGVKTGEGF 160
+ L + + P F PIPL++KLVAEGKLG KT +GF
Sbjct: 257 QSTLKIFRETIPGDARFAPIPLMDKLVAEGKLGRKTKQGF 296
>AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical
protein T08B2.7c protein.
Length = 697
Score = 95.9 bits (228), Expect = 2e-20
Identities = 59/159 (37%), Positives = 80/159 (50%)
Frame = -2
Query: 639 LSINEIASVVKRKDKFGGLHFFNPVPVMRLLEVVKGSETSEATYKTMMEWGKSVGKTCIT 460
L I +IA+ R DK G+H+F+PV M+LLE++ TS+ T T + G GK +
Sbjct: 496 LPIKDIAAASSRPDKVIGMHYFSPVEKMQLLEIITHDGTSKETLATAAQLGLKQGKLVVV 555
Query: 459 CKDTPGFVVNRLLVPYICEAIRLYERGDASARDIDIAMKLGAGYPMGPLELADYVGLDTN 280
KD PGF V R L P E +RL + G A + K G+P+G LAD VGLD
Sbjct: 556 VKDCPGFFVVRCLGPMTAEIMRLLQEGVDPAELDKLTTKF--GFPVGAATLADEVGLDVA 613
Query: 279 KFILDGWHKKFPDQQLFKPIPLLEKLVAEGKLGVKTGEG 163
+ + K + LL +LV G G KTG+G
Sbjct: 614 EHVAQFLGKALGPRLGGGSADLLSELVKAGHKGRKTGKG 652
>AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical
protein T08B2.7b protein.
Length = 755
Score = 95.9 bits (228), Expect = 2e-20
Identities = 59/159 (37%), Positives = 80/159 (50%)
Frame = -2
Query: 639 LSINEIASVVKRKDKFGGLHFFNPVPVMRLLEVVKGSETSEATYKTMMEWGKSVGKTCIT 460
L I +IA+ R DK G+H+F+PV M+LLE++ TS+ T T + G GK +
Sbjct: 470 LPIKDIAAASSRPDKVIGMHYFSPVEKMQLLEIITHDGTSKETLATAAQLGLKQGKLVVV 529
Query: 459 CKDTPGFVVNRLLVPYICEAIRLYERGDASARDIDIAMKLGAGYPMGPLELADYVGLDTN 280
KD PGF V R L P E +RL + G A + K G+P+G LAD VGLD
Sbjct: 530 VKDCPGFFVVRCLGPMTAEIMRLLQEGVDPAELDKLTTKF--GFPVGAATLADEVGLDVA 587
Query: 279 KFILDGWHKKFPDQQLFKPIPLLEKLVAEGKLGVKTGEG 163
+ + K + LL +LV G G KTG+G
Sbjct: 588 EHVAQFLGKALGPRLGGGSADLLSELVKAGHKGRKTGKG 626
Score = 32.7 bits (71), Expect = 0.23
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = -2
Query: 429 RLLVPYICEAIRLYERGD-ASARDIDIAMKLGAGYPM---GPLELADYVGLDTNKFILDG 262
RL+ ++ EA+ E G AS D DIA G G+P GP D G D ++
Sbjct: 668 RLVSRFVNEALLCLEEGVLASPSDGDIASVFGVGFPPFWGGPFRFVDLYGADKLVKSMEK 727
Query: 261 WHKKFPDQQLFKPIPLLEKLVAEGK 187
+ + Q F+P LL+ GK
Sbjct: 728 FAGAYEAVQ-FEPCQLLKDHAKSGK 751
>AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical
protein T08B2.7a protein.
Length = 781
Score = 95.9 bits (228), Expect = 2e-20
Identities = 59/159 (37%), Positives = 80/159 (50%)
Frame = -2
Query: 639 LSINEIASVVKRKDKFGGLHFFNPVPVMRLLEVVKGSETSEATYKTMMEWGKSVGKTCIT 460
L I +IA+ R DK G+H+F+PV M+LLE++ TS+ T T + G GK +
Sbjct: 496 LPIKDIAAASSRPDKVIGMHYFSPVEKMQLLEIITHDGTSKETLATAAQLGLKQGKLVVV 555
Query: 459 CKDTPGFVVNRLLVPYICEAIRLYERGDASARDIDIAMKLGAGYPMGPLELADYVGLDTN 280
KD PGF V R L P E +RL + G A + K G+P+G LAD VGLD
Sbjct: 556 VKDCPGFFVVRCLGPMTAEIMRLLQEGVDPAELDKLTTKF--GFPVGAATLADEVGLDVA 613
Query: 279 KFILDGWHKKFPDQQLFKPIPLLEKLVAEGKLGVKTGEG 163
+ + K + LL +LV G G KTG+G
Sbjct: 614 EHVAQFLGKALGPRLGGGSADLLSELVKAGHKGRKTGKG 652
Score = 32.7 bits (71), Expect = 0.23
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = -2
Query: 429 RLLVPYICEAIRLYERGD-ASARDIDIAMKLGAGYPM---GPLELADYVGLDTNKFILDG 262
RL+ ++ EA+ E G AS D DIA G G+P GP D G D ++
Sbjct: 694 RLVSRFVNEALLCLEEGVLASPSDGDIASVFGVGFPPFWGGPFRFVDLYGADKLVKSMEK 753
Query: 261 WHKKFPDQQLFKPIPLLEKLVAEGK 187
+ + Q F+P LL+ GK
Sbjct: 754 FAGAYEAVQ-FEPCQLLKDHAKSGK 777
>Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical
protein C29F3.1 protein.
Length = 755
Score = 91.9 bits (218), Expect = 4e-19
Identities = 55/159 (34%), Positives = 80/159 (50%)
Frame = -2
Query: 639 LSINEIASVVKRKDKFGGLHFFNPVPVMRLLEVVKGSETSEATYKTMMEWGKSVGKTCIT 460
L I +IA+ R DK G+H+F+PV M+LLE++ TS+ T T + G GK +
Sbjct: 470 LPIKDIAAASSRSDKVIGMHYFSPVEKMQLLEIITHDGTSKETLATAAQLGLKQGKLVVV 529
Query: 459 CKDTPGFVVNRLLVPYICEAIRLYERGDASARDIDIAMKLGAGYPMGPLELADYVGLDTN 280
KD PGF V R L P + E +RL + G ++D + G+P+G LAD GLD
Sbjct: 530 VKDCPGFFVVRCLSPMMSEIVRLLQEG-VEPSELD-KLTTKFGFPVGAATLADEAGLDVA 587
Query: 279 KFILDGWHKKFPDQQLFKPIPLLEKLVAEGKLGVKTGEG 163
+ + + + LL +LV G G KT +G
Sbjct: 588 EHVARYLGTALGPRVHGGSVDLLSELVRAGHKGRKTSKG 626
>Z81055-2|CAB02891.2| 437|Caenorhabditis elegans Hypothetical
protein F01G10.2 protein.
Length = 437
Score = 79.8 bits (188), Expect = 2e-15
Identities = 49/130 (37%), Positives = 75/130 (57%), Gaps = 3/130 (2%)
Frame = -2
Query: 639 LSINEIASVVKRKDKFGGLHFFNPVPVMRLLEVVKGSETSEATYKTMMEWGKSVGKTCIT 460
L +NE++SV++ K G+HFFNP ++R++EV+ GS+TS T E +S+ K +
Sbjct: 157 LDLNEMSSVLRDPTKVVGIHFFNPANLIRMVEVIYGSKTSSKAVATAFEACRSIKKLPVL 216
Query: 459 CKDTPGFVVNRLLVPYICEAIRL-YERGDASARDIDIAMKLGAGYPMGPLELADYVGLDT 283
+ P FV NRLL Y+ ++ +L YE G ID + G+ MGPL +AD GLD
Sbjct: 217 VGNCPAFVFNRLLGVYLNQSQKLMYEYG-YLPHQID-KIITNFGFLMGPLTVADMNGLDV 274
Query: 282 NKFIL--DGW 259
+ + +GW
Sbjct: 275 MEKLKKENGW 284
>Z81055-3|CAB02892.2| 434|Caenorhabditis elegans Hypothetical
protein F01G10.3 protein.
Length = 434
Score = 75.8 bits (178), Expect = 2e-14
Identities = 52/161 (32%), Positives = 82/161 (50%), Gaps = 1/161 (0%)
Frame = -2
Query: 639 LSINEIASVVKRKDKFGGLHFFNPVPVMRLLEVVKGSETSEATYKTMMEWGKSVGKTCIT 460
L +NEI+SV++ G+HFFNP V+RL+E++ GS TS T + +S+ K +
Sbjct: 154 LDLNEISSVLRDPSNLVGIHFFNPANVIRLVEIIYGSHTSSQAIATAFQACESIKKLPVL 213
Query: 459 CKDTPGFVVNRLLVPYICEAIRL-YERGDASARDIDIAMKLGAGYPMGPLELADYVGLDT 283
+ FV NRLL Y ++ +L YE G ID + G+ MGP+ +AD G D
Sbjct: 214 VGNCKSFVFNRLLHVYFDQSQKLMYEYG-YLPHQID-KIITNFGFLMGPMTVADMNGFDV 271
Query: 282 NKFILDGWHKKFPDQQLFKPIPLLEKLVAEGKLGVKTGEGF 160
+K + +P P+ +++ + G KT +GF
Sbjct: 272 --------MEKLKKENGLEPNPIEKEMWRLKRYGRKTNKGF 304
>AC024201-11|ABQ13050.1| 284|Caenorhabditis elegans Hypothetical
protein Y71F9B.9a protein.
Length = 284
Score = 42.7 bits (96), Expect = 2e-04
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = -2
Query: 585 LHFFNPVPVMRLLEVVKGSETSEATYKTMMEWGKSVGKTCITCK-DTPGFVVNRLLVPYI 409
+H NP + L E+V TS+ T E +SV + + K + GFVVNRL +
Sbjct: 111 VHPVNPPLFLPLTELVPAPWTSQDTVDRAAEIMRSVKQEPVKLKKEVLGFVVNRLQFALL 170
Query: 408 CEAIRLYERGDASARDIDIAMKLGAG 331
E RL G D+D M G G
Sbjct: 171 AETWRLVADGVIGVNDVDAVMSAGLG 196
>AC024201-10|ABQ13051.1| 281|Caenorhabditis elegans Hypothetical
protein Y71F9B.9b protein.
Length = 281
Score = 42.7 bits (96), Expect = 2e-04
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = -2
Query: 585 LHFFNPVPVMRLLEVVKGSETSEATYKTMMEWGKSVGKTCITCK-DTPGFVVNRLLVPYI 409
+H NP + L E+V TS+ T E +SV + + K + GFVVNRL +
Sbjct: 111 VHPVNPPLFLPLTELVPAPWTSQDTVDRAAEIMRSVKQEPVKLKKEVLGFVVNRLQFALL 170
Query: 408 CEAIRLYERGDASARDIDIAMKLGAG 331
E RL G D+D M G G
Sbjct: 171 AETWRLVADGVIGVNDVDAVMSAGLG 196
>U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical
protein C01F4.2b protein.
Length = 622
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 533 PLTTSSKRITGTGLKK*RPPNLSFLFTTDA 622
P T +++TG LKK RP + SF + DA
Sbjct: 487 PTTCEPQQVTGRFLKKQRPASASFSCSLDA 516
>U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical
protein C01F4.2a protein.
Length = 986
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 533 PLTTSSKRITGTGLKK*RPPNLSFLFTTDA 622
P T +++TG LKK RP + SF + DA
Sbjct: 487 PTTCEPQQVTGRFLKKQRPASASFSCSLDA 516
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,722,205
Number of Sequences: 27780
Number of extensions: 292147
Number of successful extensions: 674
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -