Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1248
         (750 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U69274-1|AAD00172.1| 1053|Homo sapiens zinc finger protein protein.    32   1.9  
BC111700-1|AAI11701.1| 1053|Homo sapiens zinc finger and BTB dom...    32   1.9  
AB208862-1|BAD92099.1|  700|Homo sapiens zinc finger protein ZNF...    32   1.9  

>U69274-1|AAD00172.1| 1053|Homo sapiens zinc finger protein protein.
          Length = 1053

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = +1

Query: 19  CRKKKQ*INKMYSMLIYETVNDDERDTSERSRKNARTRXSVTFGRTRRFDVFAVCARAFR 198
           C+K+ Q    + + LI  T  D    +S  S  N  +  S   GRT+R  + ++C R   
Sbjct: 602 CKKQFQYSASLRAHLIRHTRKDAPSSSSSNSTSNEASGTSSEKGRTKREFICSICGRTLP 661

Query: 199 ILY 207
            LY
Sbjct: 662 KLY 664


>BC111700-1|AAI11701.1| 1053|Homo sapiens zinc finger and BTB domain
           containing 11 protein.
          Length = 1053

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = +1

Query: 19  CRKKKQ*INKMYSMLIYETVNDDERDTSERSRKNARTRXSVTFGRTRRFDVFAVCARAFR 198
           C+K+ Q    + + LI  T  D    +S  S  N  +  S   GRT+R  + ++C R   
Sbjct: 602 CKKQFQYSASLRAHLIRHTRKDAPSSSSSNSTSNEASGTSSEKGRTKREFICSICGRTLP 661

Query: 199 ILY 207
            LY
Sbjct: 662 KLY 664


>AB208862-1|BAD92099.1|  700|Homo sapiens zinc finger protein
           ZNF-U69274 variant protein.
          Length = 700

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = +1

Query: 19  CRKKKQ*INKMYSMLIYETVNDDERDTSERSRKNARTRXSVTFGRTRRFDVFAVCARAFR 198
           C+K+ Q    + + LI  T  D    +S  S  N  +  S   GRT+R  + ++C R   
Sbjct: 249 CKKQFQYSASLRAHLIRHTRKDAPSSSSSNSTSNEASGTSSEKGRTKREFICSICGRTLP 308

Query: 199 ILY 207
            LY
Sbjct: 309 KLY 311


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,552,731
Number of Sequences: 237096
Number of extensions: 868616
Number of successful extensions: 1337
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1337
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)