Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1237
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    28   0.069
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   6.0  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   8.0  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   8.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.0  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 28.3 bits (60), Expect = 0.069
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -3

Query: 694 GLVQICKMAQVYPHPAPEGCTSASXESAPSDQPIYPDTG 578
           GL  + ++  VYP+     C   + E++ SD P +P  G
Sbjct: 181 GLETLSQLMDVYPNNDGTKCLVVTDEASISDAPFFPHRG 219


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/46 (23%), Positives = 24/46 (52%)
 Frame = -1

Query: 210 DRASFSKVVEAIKTNFNERYEELRKHWGGGVLGNKSNARIAKLEKD 73
           D+ +F  ++  +K+  N + + L     GG+   K +  IAK+ ++
Sbjct: 154 DKVNFVTLLGELKSALNAKGKTLSAAVSGGIASCKLSYDIAKVAEN 199


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -1

Query: 342 VLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESG 211
           VLF+  +   +GV Y ++ G+SR   + +    T LAL ++  G
Sbjct: 33  VLFVIIVAGNVGVLYTLLFGRSRKSRMNY--FITHLALADLSVG 74


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 454 TKEAQHHPIRHKHSHQA 404
           TK   HH I+ +H HQ+
Sbjct: 101 TKFNPHHEIKLQHLHQS 117


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 141  RKHWGGGVLGNKSNARIAKLEK 76
            R+ W G +LG     R+A  +K
Sbjct: 1021 REEWNGDILGYYVGYRLANSDK 1042


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,515
Number of Sequences: 336
Number of extensions: 2607
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)