Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1223
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118559-1|AAM49928.1|  280|Drosophila melanogaster LD37702p pro...    30   2.9  
AE014296-1928|AAN11883.1|  721|Drosophila melanogaster CG6199-PB...    30   2.9  
AE014296-1927|AAF50079.1|  721|Drosophila melanogaster CG6199-PA...    30   2.9  
AY051561-1|AAK92985.1|  361|Drosophila melanogaster GH21056p pro...    29   8.9  
AF137270-1|AAD50379.1|  438|Drosophila melanogaster gap junction...    29   8.9  
AE014298-986|AAF46228.1|  438|Drosophila melanogaster CG2977-PA,...    29   8.9  
AE014298-985|AAN09192.1|  361|Drosophila melanogaster CG2977-PB,...    29   8.9  

>AY118559-1|AAM49928.1|  280|Drosophila melanogaster LD37702p
           protein.
          Length = 280

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = -3

Query: 745 VXKGTRYIMISFVDP 701
           V  GTRYIMISF+DP
Sbjct: 266 VTNGTRYIMISFIDP 280


>AE014296-1928|AAN11883.1|  721|Drosophila melanogaster CG6199-PB,
           isoform B protein.
          Length = 721

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = -3

Query: 745 VXKGTRYIMISFVDP 701
           V  GTRYIMISF+DP
Sbjct: 707 VTNGTRYIMISFIDP 721


>AE014296-1927|AAF50079.1|  721|Drosophila melanogaster CG6199-PA,
           isoform A protein.
          Length = 721

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = -3

Query: 745 VXKGTRYIMISFVDP 701
           V  GTRYIMISF+DP
Sbjct: 707 VTNGTRYIMISFIDP 721


>AY051561-1|AAK92985.1|  361|Drosophila melanogaster GH21056p
           protein.
          Length = 361

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +2

Query: 56  ESLCYNAVNLXRHSIYVR*YLWFYVSLNESFT*YLFK*KILCIYR 190
           ++LC  A+N+    IY+  + W+   L  +    L++   LC YR
Sbjct: 193 DALCVMALNIMNEKIYIILWFWYAFLLIVTVLGLLWRILTLCFYR 237


>AF137270-1|AAD50379.1|  438|Drosophila melanogaster gap junction
           protein prp7 protein.
          Length = 438

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +2

Query: 56  ESLCYNAVNLXRHSIYVR*YLWFYVSLNESFT*YLFK*KILCIYR 190
           ++LC  A+N+    IY+  + W+   L  +    L++   LC YR
Sbjct: 270 DALCVMALNIMNEKIYIILWFWYAFLLIVTVLGLLWRILTLCFYR 314


>AE014298-986|AAF46228.1|  438|Drosophila melanogaster CG2977-PA,
           isoform A protein.
          Length = 438

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +2

Query: 56  ESLCYNAVNLXRHSIYVR*YLWFYVSLNESFT*YLFK*KILCIYR 190
           ++LC  A+N+    IY+  + W+   L  +    L++   LC YR
Sbjct: 270 DALCVMALNIMNEKIYIILWFWYAFLLIVTVLGLLWRILTLCFYR 314


>AE014298-985|AAN09192.1|  361|Drosophila melanogaster CG2977-PB,
           isoform B protein.
          Length = 361

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +2

Query: 56  ESLCYNAVNLXRHSIYVR*YLWFYVSLNESFT*YLFK*KILCIYR 190
           ++LC  A+N+    IY+  + W+   L  +    L++   LC YR
Sbjct: 193 DALCVMALNIMNEKIYIILWFWYAFLLIVTVLGLLWRILTLCFYR 237


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,650,017
Number of Sequences: 53049
Number of extensions: 389488
Number of successful extensions: 690
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)