Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1211
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2278|AAF53242.2| 1263|Drosophila melanogaster CG5122-PA...    29   4.1  
BT022751-1|AAY55167.1|  572|Drosophila melanogaster IP14661p pro...    28   9.6  
AY118712-1|AAM50572.1| 1266|Drosophila melanogaster AT25667p pro...    28   9.6  
AY089307-1|AAL90045.1|  572|Drosophila melanogaster AT11139p pro...    28   9.6  
AE013599-3816|AAF47165.3| 1669|Drosophila melanogaster CG4049-PA...    28   9.6  
AE013599-2157|AAF58079.1|  572|Drosophila melanogaster CG8388-PA...    28   9.6  

>AE014134-2278|AAF53242.2| 1263|Drosophila melanogaster CG5122-PA
           protein.
          Length = 1263

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -3

Query: 540 RTEXASAAPDIAKPSESNLLTETKPEQPAAG 448
           + E ASA P IA P  +   T+  PE P  G
Sbjct: 292 KKENASAKPKIASPPPNKAQTDKSPENPKVG 322


>BT022751-1|AAY55167.1|  572|Drosophila melanogaster IP14661p
           protein.
          Length = 572

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = -3

Query: 504 KPSESNLLTETKPEQPAAGPLKQIFENSPVXQGIAGAVKKIQTTVNNPVKPRDSEVVEET 325
           K  E  +L ET P +  A  L++    S     +A AVK+ +     P K    +  EE 
Sbjct: 73  KALEQTVLKETSPPEVVASALEEHIVKSEHDDSVAAAVKRRR---GRPRKVAQQDAREEL 129

Query: 324 KSDQEK 307
           KS  E+
Sbjct: 130 KSVLEQ 135


>AY118712-1|AAM50572.1| 1266|Drosophila melanogaster AT25667p
           protein.
          Length = 1266

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -3

Query: 540 RTEXASAAPDIAKPSESNLLTETKPEQPAAG 448
           + E ASA P IA P  +   T+  PE P  G
Sbjct: 295 KKENASANPKIASPPPNKAQTDKLPENPKVG 325


>AY089307-1|AAL90045.1|  572|Drosophila melanogaster AT11139p
           protein.
          Length = 572

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = -3

Query: 504 KPSESNLLTETKPEQPAAGPLKQIFENSPVXQGIAGAVKKIQTTVNNPVKPRDSEVVEET 325
           K  E  +L ET P +  A  L++    S     +A AVK+ +     P K    +  EE 
Sbjct: 73  KALEQTVLKETSPPEVVASALEEHIVKSEHDDSVAAAVKRRR---GRPRKVAQQDAREEL 129

Query: 324 KSDQEK 307
           KS  E+
Sbjct: 130 KSVLEQ 135


>AE013599-3816|AAF47165.3| 1669|Drosophila melanogaster CG4049-PA
            protein.
          Length = 1669

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 21/78 (26%), Positives = 32/78 (41%)
 Frame = -3

Query: 543  VRTEXASAAPDIAKPSESNLLTETKPEQPAAGPLKQIFENSPVXQGIAGAVKKIQTTVNN 364
            V+   A   P + K  ESN  T ++PE PA    ++  EN    +        + TT N 
Sbjct: 1423 VKDLTADDEPRVVKNKESNPATTSRPEMPAKD--RKSTENVQHFKSQTQPNTTLATTTNQ 1480

Query: 363  PVKPRDSEVVEETKSDQE 310
               P D    +  +S Q+
Sbjct: 1481 HQLPSDLTYSQPQQSHQQ 1498


>AE013599-2157|AAF58079.1|  572|Drosophila melanogaster CG8388-PA
           protein.
          Length = 572

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = -3

Query: 504 KPSESNLLTETKPEQPAAGPLKQIFENSPVXQGIAGAVKKIQTTVNNPVKPRDSEVVEET 325
           K  E  +L ET P +  A  L++    S     +A AVK+ +     P K    +  EE 
Sbjct: 73  KALEQTVLKETSPPEVVASALEEHIVKSEHDDSVAAAVKRRR---GRPRKVAQQDAREEL 129

Query: 324 KSDQEK 307
           KS  E+
Sbjct: 130 KSVLEQ 135


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,085,817
Number of Sequences: 53049
Number of extensions: 330681
Number of successful extensions: 1089
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)