Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1209
         (700 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL358789-2|CAI14913.1|  553|Homo sapiens mucolipin 3 protein.          31   4.0  
AL358789-1|CAI14914.1|  497|Homo sapiens mucolipin 3 protein.          31   4.0  
AK001868-1|BAA91951.1|  497|Homo sapiens protein ( Homo sapiens ...    31   4.0  
AF475085-1|AAL84622.1|  553|Homo sapiens mucolipin-3 protein.          31   4.0  
BC100937-1|AAI00938.1|  301|Homo sapiens solute carrier family 2...    30   6.9  

>AL358789-2|CAI14913.1|  553|Homo sapiens mucolipin 3 protein.
          Length = 553

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = -1

Query: 358 CHDYIGEYCNLVWCYYSNFNLYLFGKFCFVIITYSIENQNLIFFCVHHSFVYLV*CF 188
           C   +G    LVW     + L  F K+  +I+T      N+I FC   + +YL  CF
Sbjct: 373 CSILLGTSTMLVWLGVIRY-LGFFAKYNLLILTLQAALPNVIRFCCCAAMIYLGYCF 428


>AL358789-1|CAI14914.1|  497|Homo sapiens mucolipin 3 protein.
          Length = 497

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = -1

Query: 358 CHDYIGEYCNLVWCYYSNFNLYLFGKFCFVIITYSIENQNLIFFCVHHSFVYLV*CF 188
           C   +G    LVW     + L  F K+  +I+T      N+I FC   + +YL  CF
Sbjct: 317 CSILLGTSTMLVWLGVIRY-LGFFAKYNLLILTLQAALPNVIRFCCCAAMIYLGYCF 372


>AK001868-1|BAA91951.1|  497|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11006 fis, clone PLACE1003045. ).
          Length = 497

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = -1

Query: 358 CHDYIGEYCNLVWCYYSNFNLYLFGKFCFVIITYSIENQNLIFFCVHHSFVYLV*CF 188
           C   +G    LVW     + L  F K+  +I+T      N+I FC   + +YL  CF
Sbjct: 317 CSILLGTSTMLVWLGVIRY-LGFFAKYNLLILTLQAALPNVIRFCCCAAMIYLGYCF 372


>AF475085-1|AAL84622.1|  553|Homo sapiens mucolipin-3 protein.
          Length = 553

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = -1

Query: 358 CHDYIGEYCNLVWCYYSNFNLYLFGKFCFVIITYSIENQNLIFFCVHHSFVYLV*CF 188
           C   +G    LVW     + L  F K+  +I+T      N+I FC   + +YL  CF
Sbjct: 373 CSILLGTSTMLVWLGVIRY-LGFFAKYNLLILTLQAALPNVIRFCCCAAMIYLGYCF 428


>BC100937-1|AAI00938.1|  301|Homo sapiens solute carrier family 25
           (mitochondrial carrier; ornithine transporter) member
           protein.
          Length = 301

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -2

Query: 588 ALAKVPNAEDKLKVEKLIDACLANKGNSPHQTAWNYVKCYHEKD 457
           ALA  P    K +++ + +  ++ K    H T W+ VKC  +KD
Sbjct: 121 ALALCPTELVKCRLQTMYEMEMSGKIAKSHNTIWSVVKCILKKD 164


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,069,333
Number of Sequences: 237096
Number of extensions: 1724340
Number of successful extensions: 2557
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2557
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)