Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1208
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   6.3  
AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          23   8.4  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 383 LPN*HNWYIFFRIS*FDM 330
           LPN   W++ FR+S  DM
Sbjct: 256 LPNNPPWFVIFRVSEDDM 273


>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 17/66 (25%), Positives = 31/66 (46%)
 Frame = -2

Query: 481 ETTQEKFRRNLIEFSSIKLKCMQSVLRAYDIIFCQTNITGIYFLE*VNLIWI*KISMRDE 302
           E  +EK + N  + S +K+K M ++  A+  +    +   +  L  V + WI  +S R+ 
Sbjct: 67  ERDEEKLKNNNRDLSLVKMKSMFAIGFAFTALLSIFDGRIVARLPFVPISWIQGLSHRNL 126

Query: 301 VVDSXT 284
             D  T
Sbjct: 127 PGDDYT 132


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,368
Number of Sequences: 2352
Number of extensions: 14531
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)