Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1204
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC059360-1|AAH59360.1| 622|Homo sapiens phosphoglucomutase 2-li... 60 1e-08
AK056591-1|BAB71227.1| 622|Homo sapiens protein ( Homo sapiens ... 60 1e-08
AB019210-1|BAA82756.1| 622|Homo sapiens PMMLP protein. 60 1e-08
CR457274-1|CAG33555.1| 612|Homo sapiens PGM2 protein. 53 9e-07
BC010087-1|AAH10087.1| 612|Homo sapiens phosphoglucomutase 2 pr... 53 9e-07
AK223237-1|BAD96957.1| 612|Homo sapiens phosphoglucomutase 2 va... 53 9e-07
AK001845-1|BAA91938.1| 612|Homo sapiens protein ( Homo sapiens ... 53 9e-07
AF109360-1|AAQ13508.1| 612|Homo sapiens MSTP006 protein. 53 9e-07
U48730-1|AAC50485.2| 787|Homo sapiens transcription factor Stat... 30 6.9
U47686-1|AAC50491.1| 787|Homo sapiens signal transducer and act... 30 6.9
U42391-1|AAC50402.1| 2022|Homo sapiens myosin-IXb protein. 30 6.9
BC065227-1|AAH65227.1| 787|Homo sapiens signal transducer and a... 30 6.9
AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens ... 30 6.9
AJ412888-1|CAD19638.1| 787|Homo sapiens protein ( Homo sapiens ... 30 6.9
AB208920-1|BAD92157.1| 788|Homo sapiens signal transducer and a... 30 6.9
AL591375-2|CAI12099.1| 1652|Homo sapiens NHS-like 1 protein. 30 9.1
AL391669-2|CAI14157.1| 1652|Homo sapiens NHS-like 1 protein. 30 9.1
>BC059360-1|AAH59360.1| 622|Homo sapiens phosphoglucomutase 2-like
1 protein.
Length = 622
Score = 59.7 bits (138), Expect = 1e-08
Identities = 27/69 (39%), Positives = 42/69 (60%)
Frame = -3
Query: 476 SGEMVMFRCDTGLSACVRTSGTEPKLKYYTELVCRADTVSEQEEMKSKLKQIVXEFINEL 297
+ +M+ F G A +RTSGTEPK+KYY E+ C + S+ ++ +LK+++ I
Sbjct: 551 NSQMITFTFQNGCVATLRTSGTEPKIKYYAEM-CASPDQSDTALLEEELKKLIDALIENF 609
Query: 296 LQPEENGXI 270
LQP +NG I
Sbjct: 610 LQPSKNGLI 618
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 697 GYMCDVRVPDKDGVSXXVQVASLXSH 620
G++C V DKDGVS V VA + S+
Sbjct: 438 GFLCGTSVLDKDGVSAAVVVAEMASY 463
>AK056591-1|BAB71227.1| 622|Homo sapiens protein ( Homo sapiens
cDNA FLJ32029 fis, clone NTONG1000264. ).
Length = 622
Score = 59.7 bits (138), Expect = 1e-08
Identities = 27/69 (39%), Positives = 42/69 (60%)
Frame = -3
Query: 476 SGEMVMFRCDTGLSACVRTSGTEPKLKYYTELVCRADTVSEQEEMKSKLKQIVXEFINEL 297
+ +M+ F G A +RTSGTEPK+KYY E+ C + S+ ++ +LK+++ I
Sbjct: 551 NSQMITFTFQNGCVATLRTSGTEPKIKYYAEM-CASPDQSDTALLEEELKKLIDALIENF 609
Query: 296 LQPEENGXI 270
LQP +NG I
Sbjct: 610 LQPSKNGLI 618
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 697 GYMCDVRVPDKDGVSXXVQVASLXSH 620
G++C V DKDGVS V VA + S+
Sbjct: 438 GFLCGTSVLDKDGVSAAVVVAEMASY 463
>AB019210-1|BAA82756.1| 622|Homo sapiens PMMLP protein.
Length = 622
Score = 59.7 bits (138), Expect = 1e-08
Identities = 27/69 (39%), Positives = 42/69 (60%)
Frame = -3
Query: 476 SGEMVMFRCDTGLSACVRTSGTEPKLKYYTELVCRADTVSEQEEMKSKLKQIVXEFINEL 297
+ +M+ F G A +RTSGTEPK+KYY E+ C + S+ ++ +LK+++ I
Sbjct: 551 NSQMITFTFQNGCVATLRTSGTEPKIKYYAEM-CASPDQSDTALLEEELKKLIDALIENF 609
Query: 296 LQPEENGXI 270
LQP +NG I
Sbjct: 610 LQPSKNGLI 618
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 697 GYMCDVRVPDKDGVSXXVQVASLXSH 620
G++C V DKDGVS V VA + S+
Sbjct: 438 GFLCGTSVLDKDGVSAAVVVAEMASY 463
>CR457274-1|CAG33555.1| 612|Homo sapiens PGM2 protein.
Length = 612
Score = 53.2 bits (122), Expect = 9e-07
Identities = 26/65 (40%), Positives = 38/65 (58%)
Frame = -3
Query: 476 SGEMVMFRCDTGLSACVRTSGTEPKLKYYTELVCRADTVSEQEEMKSKLKQIVXEFINEL 297
S +M+ F G A +RTSGTEPK+KYY EL C S+ E++K +L ++V
Sbjct: 541 SSQMITFTFANGGVATMRTSGTEPKIKYYAEL-CAPPGNSDPEQLKKELNELVSAIEEHF 599
Query: 296 LQPEE 282
QP++
Sbjct: 600 FQPQK 604
>BC010087-1|AAH10087.1| 612|Homo sapiens phosphoglucomutase 2
protein.
Length = 612
Score = 53.2 bits (122), Expect = 9e-07
Identities = 26/65 (40%), Positives = 38/65 (58%)
Frame = -3
Query: 476 SGEMVMFRCDTGLSACVRTSGTEPKLKYYTELVCRADTVSEQEEMKSKLKQIVXEFINEL 297
S +M+ F G A +RTSGTEPK+KYY EL C S+ E++K +L ++V
Sbjct: 541 SSQMITFTFANGGVATMRTSGTEPKIKYYAEL-CAPPGNSDPEQLKKELNELVSAIEEHF 599
Query: 296 LQPEE 282
QP++
Sbjct: 600 FQPQK 604
>AK223237-1|BAD96957.1| 612|Homo sapiens phosphoglucomutase 2
variant protein.
Length = 612
Score = 53.2 bits (122), Expect = 9e-07
Identities = 26/65 (40%), Positives = 38/65 (58%)
Frame = -3
Query: 476 SGEMVMFRCDTGLSACVRTSGTEPKLKYYTELVCRADTVSEQEEMKSKLKQIVXEFINEL 297
S +M+ F G A +RTSGTEPK+KYY EL C S+ E++K +L ++V
Sbjct: 541 SSQMITFTFANGGVATMRTSGTEPKIKYYAEL-CAPPGNSDPEQLKKELNELVSAIEEHF 599
Query: 296 LQPEE 282
QP++
Sbjct: 600 FQPQK 604
>AK001845-1|BAA91938.1| 612|Homo sapiens protein ( Homo sapiens
cDNA FLJ10983 fis, clone PLACE1001781, weakly similar to
PROBABLE PHOSPHOMANNOMUTASE (EC 5.4.2.8). ).
Length = 612
Score = 53.2 bits (122), Expect = 9e-07
Identities = 26/65 (40%), Positives = 38/65 (58%)
Frame = -3
Query: 476 SGEMVMFRCDTGLSACVRTSGTEPKLKYYTELVCRADTVSEQEEMKSKLKQIVXEFINEL 297
S +M+ F G A +RTSGTEPK+KYY EL C S+ E++K +L ++V
Sbjct: 541 SSQMITFTFANGGVATMRTSGTEPKIKYYAEL-CAPPGNSDPEQLKKELNELVSAIEEHF 599
Query: 296 LQPEE 282
QP++
Sbjct: 600 FQPQK 604
>AF109360-1|AAQ13508.1| 612|Homo sapiens MSTP006 protein.
Length = 612
Score = 53.2 bits (122), Expect = 9e-07
Identities = 26/65 (40%), Positives = 38/65 (58%)
Frame = -3
Query: 476 SGEMVMFRCDTGLSACVRTSGTEPKLKYYTELVCRADTVSEQEEMKSKLKQIVXEFINEL 297
S +M+ F G A +RTSGTEPK+KYY EL C S+ E++K +L ++V
Sbjct: 541 SSQMITFTFANGGVATMRTSGTEPKIKYYAEL-CAPPGNSDPEQLKKELNELVSAIEEHF 599
Query: 296 LQPEE 282
QP++
Sbjct: 600 FQPQK 604
>U48730-1|AAC50485.2| 787|Homo sapiens transcription factor Stat5b
protein.
Length = 787
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -3
Query: 398 KYYTELVCRADTVSEQEE-MKSKLKQIVXEFIN 303
KYYT + C + T + +K ++KQ+V EF+N
Sbjct: 681 KYYTPVPCESATAKAVDGYVKPQIKQVVPEFVN 713
>U47686-1|AAC50491.1| 787|Homo sapiens signal transducer and
activator of transcription Stat5B protein.
Length = 787
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -3
Query: 398 KYYTELVCRADTVSEQEE-MKSKLKQIVXEFIN 303
KYYT + C + T + +K ++KQ+V EF+N
Sbjct: 681 KYYTPVPCESATAKAVDGYVKPQIKQVVPEFVN 713
>U42391-1|AAC50402.1| 2022|Homo sapiens myosin-IXb protein.
Length = 2022
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 368 RPGRPARCST*AWARSRWCARTRS-APCRSGTSPSRRSCSPGPAR 499
RP RPAR S RSR RT + +P SG PSR + P R
Sbjct: 1977 RPPRPARESPAQPPRSRPRVRTETPSPLSSGPPPSRSNTGMAPLR 2021
>BC065227-1|AAH65227.1| 787|Homo sapiens signal transducer and
activator of transcription 5B protein.
Length = 787
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -3
Query: 398 KYYTELVCRADTVSEQEE-MKSKLKQIVXEFIN 303
KYYT + C + T + +K ++KQ+V EF+N
Sbjct: 681 KYYTPVPCESATAKAVDGYVKPQIKQVVPEFVN 713
>AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens
cDNA FLJ46551 fis, clone THYMU3038687. ).
Length = 189
Score = 30.3 bits (65), Expect = 6.9
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +2
Query: 338 ISFPLVR*QCRPGRPARCST*AW-ARSRW--CARTRSAPCRSGTSP 466
+S P R CRP RP+ C W +RS W C R C G P
Sbjct: 145 LSTPAPR-SCRPWRPSSCEWLCWTSRSTWKRCFWKRRWGCNRGPQP 189
>AJ412888-1|CAD19638.1| 787|Homo sapiens protein ( Homo sapiens
partial STAT5B gene for signal transducer and
activatorof transcription 5B, exon 2 and joined CDS. ).
Length = 787
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -3
Query: 398 KYYTELVCRADTVSEQEE-MKSKLKQIVXEFIN 303
KYYT + C + T + +K ++KQ+V EF+N
Sbjct: 681 KYYTPVPCESATAKAVDGYVKPQIKQVVPEFVN 713
>AB208920-1|BAD92157.1| 788|Homo sapiens signal transducer and
activator of transcription 5B variant protein.
Length = 788
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -3
Query: 398 KYYTELVCRADTVSEQEE-MKSKLKQIVXEFIN 303
KYYT + C + T + +K ++KQ+V EF+N
Sbjct: 682 KYYTPVPCESATAKAVDGYVKPQIKQVVPEFVN 714
>AL591375-2|CAI12099.1| 1652|Homo sapiens NHS-like 1 protein.
Length = 1652
Score = 29.9 bits (64), Expect = 9.1
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 437 SAPCRSGTSPSRRSCSPGPARCLTRVGVLSVRGAGGAVTPA-VKSVXSRCSWEPN 598
S P +SG+SPS+ CS L R S AG ++T A +V S C P+
Sbjct: 715 SLPGKSGSSPSQSPCSDLEEPWLPRSRSQSTVSAGSSMTSATTPNVYSLCGATPS 769
>AL391669-2|CAI14157.1| 1652|Homo sapiens NHS-like 1 protein.
Length = 1652
Score = 29.9 bits (64), Expect = 9.1
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 437 SAPCRSGTSPSRRSCSPGPARCLTRVGVLSVRGAGGAVTPA-VKSVXSRCSWEPN 598
S P +SG+SPS+ CS L R S AG ++T A +V S C P+
Sbjct: 715 SLPGKSGSSPSQSPCSDLEEPWLPRSRSQSTVSAGSSMTSATTPNVYSLCGATPS 769
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,776,324
Number of Sequences: 237096
Number of extensions: 1434387
Number of successful extensions: 4176
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4140
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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