Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1204
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021477-1|AAX33625.1|  586|Drosophila melanogaster AT01222p pro...    51   1e-06
BT003628-1|AAO39632.1|  642|Drosophila melanogaster AT28824p pro...    51   1e-06
AY061184-1|AAL28732.2|  431|Drosophila melanogaster LD14913p pro...    51   1e-06
AF173548-1|AAL29183.1|  609|Drosophila melanogaster phosphomanno...    51   1e-06
AE013599-785|AAF58988.1|  623|Drosophila melanogaster CG8073-PA,...    51   1e-06
AE013599-1960|AAF58201.1|  628|Drosophila melanogaster CG10202-P...    43   3e-04
AY051856-1|AAK93280.1|  874|Drosophila melanogaster LD35413p pro...    31   1.1  
AE014297-1406|AAF54719.2|  874|Drosophila melanogaster CG31211-P...    31   1.1  
AE014297-1405|AAO41546.1|  893|Drosophila melanogaster CG31211-P...    31   1.1  
AY075547-1|AAL68354.1|  180|Drosophila melanogaster RH49123p pro...    30   2.6  
AE014296-368|AAN11500.1|  180|Drosophila melanogaster CG12023-PB...    30   2.6  
AE014296-367|AAF47577.2|  354|Drosophila melanogaster CG12023-PA...    30   2.6  
AF181653-1|AAD55438.1|  998|Drosophila melanogaster BcDNA.LD2363...    29   4.6  
AE014298-768|AAF46056.1|  998|Drosophila melanogaster CG4119-PA ...    29   4.6  
BT012434-1|AAS93705.1|  400|Drosophila melanogaster RH66859p pro...    29   6.1  
AY058638-1|AAL13867.1|  492|Drosophila melanogaster LD33732p pro...    29   8.0  
AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p pro...    29   8.0  
AY052096-1|AAK93520.1|  574|Drosophila melanogaster SD04526p pro...    29   8.0  
AE014296-3703|AAN12199.1|  574|Drosophila melanogaster CG32452-P...    29   8.0  
AE014296-3702|AAN12198.1|  574|Drosophila melanogaster CG32452-P...    29   8.0  
AE014296-326|AAF47543.2| 1062|Drosophila melanogaster CG7971-PA,...    29   8.0  
AE014296-325|AAZ66051.1|  849|Drosophila melanogaster CG7971-PD,...    29   8.0  
AE014296-324|AAF47542.2| 1107|Drosophila melanogaster CG7971-PC,...    29   8.0  

>BT021477-1|AAX33625.1|  586|Drosophila melanogaster AT01222p
           protein.
          Length = 586

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 23/68 (33%), Positives = 37/68 (54%)
 Frame = -3

Query: 479 TSGEMVMFRCDTGLSACVRTSGTEPKLKYYTELVCRADTVSEQEEMKSKLKQIVXEFINE 300
           +S +M+ F    GL   +RTSGTEPK+KYY E+ C         ++ + +  +V   + E
Sbjct: 514 SSSQMITFTFKNGLVVTLRTSGTEPKMKYYAEM-CGKPDEKNWAKLTNTMNTMVEAIVEE 572

Query: 299 LLQPEENG 276
             +P +NG
Sbjct: 573 FYEPSKNG 580


>BT003628-1|AAO39632.1|  642|Drosophila melanogaster AT28824p
           protein.
          Length = 642

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 23/68 (33%), Positives = 37/68 (54%)
 Frame = -3

Query: 479 TSGEMVMFRCDTGLSACVRTSGTEPKLKYYTELVCRADTVSEQEEMKSKLKQIVXEFINE 300
           +S +M+ F    GL   +RTSGTEPK+KYY E+ C         ++ + +  +V   + E
Sbjct: 570 SSSQMITFTFKNGLVVTLRTSGTEPKMKYYAEM-CGKPDEKNWAKLTNTMNTMVEAIVEE 628

Query: 299 LLQPEENG 276
             +P +NG
Sbjct: 629 FYEPSKNG 636


>AY061184-1|AAL28732.2|  431|Drosophila melanogaster LD14913p
           protein.
          Length = 431

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 23/68 (33%), Positives = 37/68 (54%)
 Frame = -3

Query: 479 TSGEMVMFRCDTGLSACVRTSGTEPKLKYYTELVCRADTVSEQEEMKSKLKQIVXEFINE 300
           +S +M+ F    GL   +RTSGTEPK+KYY E+ C         ++ + +  +V   + E
Sbjct: 359 SSSQMITFTFKNGLVVTLRTSGTEPKMKYYAEM-CGKPDEKNWAKLTNTMNTMVEAIVEE 417

Query: 299 LLQPEENG 276
             +P +NG
Sbjct: 418 FYEPSKNG 425


>AF173548-1|AAL29183.1|  609|Drosophila melanogaster
           phosphomannomutase 45A protein.
          Length = 609

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 23/68 (33%), Positives = 37/68 (54%)
 Frame = -3

Query: 479 TSGEMVMFRCDTGLSACVRTSGTEPKLKYYTELVCRADTVSEQEEMKSKLKQIVXEFINE 300
           +S +M+ F    GL   +RTSGTEPK+KYY E+ C         ++ + +  +V   + E
Sbjct: 537 SSSQMITFTFKNGLVVTLRTSGTEPKMKYYAEM-CGKPDEKNWAKLTNTMNTMVEAIVEE 595

Query: 299 LLQPEENG 276
             +P +NG
Sbjct: 596 FYEPSKNG 603


>AE013599-785|AAF58988.1|  623|Drosophila melanogaster CG8073-PA,
           isoform A protein.
          Length = 623

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 23/68 (33%), Positives = 37/68 (54%)
 Frame = -3

Query: 479 TSGEMVMFRCDTGLSACVRTSGTEPKLKYYTELVCRADTVSEQEEMKSKLKQIVXEFINE 300
           +S +M+ F    GL   +RTSGTEPK+KYY E+ C         ++ + +  +V   + E
Sbjct: 551 SSSQMITFTFKNGLVVTLRTSGTEPKMKYYAEM-CGKPDEKNWAKLTNTMNTMVEAIVEE 609

Query: 299 LLQPEENG 276
             +P +NG
Sbjct: 610 FYEPSKNG 617


>AE013599-1960|AAF58201.1|  628|Drosophila melanogaster CG10202-PA
           protein.
          Length = 628

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
 Frame = -3

Query: 518 HLRVLGTGLDQDYTSG----------EMVMFRCDTGLSACVRTSGTEPKLKYYTELVCRA 369
           H+R L  GLD  ++ G          +++ F    G    +R++  + K+K   E +C  
Sbjct: 531 HIRDLTIGLDTSFSDGKARMPVTPDAQLITFTFTNGYVVTLRSAPNDIKIKLNAE-ICGL 589

Query: 368 DTVSEQEEMKSKLKQIVXEFINELLQPEENG 276
               + EE+  KL ++    + E LQPEENG
Sbjct: 590 PEEKQWEELHDKLNRMTNAVVEEFLQPEENG 620



 Score = 31.5 bits (68), Expect = 1.1
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -1

Query: 697 GYMCDVRVPDKDGVSXXVQVASLXSHXR 614
           GYM  + +PDKDG+   +Q+AS+  + R
Sbjct: 439 GYMFGMSLPDKDGIGAAMQLASMACYLR 466


>AY051856-1|AAK93280.1|  874|Drosophila melanogaster LD35413p
           protein.
          Length = 874

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = -2

Query: 510 RVRHRAGPGLHERRDGDVPLRHGAERVRAHQRDRAQAQVLHRAG-LPGRHCQRTR 349
           R  H +    +ERRD D       ER R  +RDR ++   HR+  L G H Q+ R
Sbjct: 743 RSHHSSSRSKYERRDRD----RERERARERERDRDRSHRQHRSSQLSGSHHQKQR 793


>AE014297-1406|AAF54719.2|  874|Drosophila melanogaster CG31211-PA,
           isoform A protein.
          Length = 874

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = -2

Query: 510 RVRHRAGPGLHERRDGDVPLRHGAERVRAHQRDRAQAQVLHRAG-LPGRHCQRTR 349
           R  H +    +ERRD D       ER R  +RDR ++   HR+  L G H Q+ R
Sbjct: 743 RSHHSSSRSKYERRDRD----RERERARERERDRDRSHRQHRSSQLSGSHHQKQR 793


>AE014297-1405|AAO41546.1|  893|Drosophila melanogaster CG31211-PB,
           isoform B protein.
          Length = 893

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = -2

Query: 510 RVRHRAGPGLHERRDGDVPLRHGAERVRAHQRDRAQAQVLHRAG-LPGRHCQRTR 349
           R  H +    +ERRD D       ER R  +RDR ++   HR+  L G H Q+ R
Sbjct: 762 RSHHSSSRSKYERRDRD----RERERARERERDRDRSHRQHRSSQLSGSHHQKQR 812


>AY075547-1|AAL68354.1|  180|Drosophila melanogaster RH49123p
           protein.
          Length = 180

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = -2

Query: 600 SLGSQLQRLYTDFTAGVTAPPAPRTDNTPTRVRHRAGPGLHERRDGDVP 454
           SL +Q  R+      G  APP PRT   P R  +R    + E +  DVP
Sbjct: 16  SLHAQAIRVDWGTNTGPIAPPPPRTTPQPPRKPYRDPAPVWEDQSDDVP 64


>AE014296-368|AAN11500.1|  180|Drosophila melanogaster CG12023-PB,
           isoform B protein.
          Length = 180

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = -2

Query: 600 SLGSQLQRLYTDFTAGVTAPPAPRTDNTPTRVRHRAGPGLHERRDGDVP 454
           SL +Q  R+      G  APP PRT   P R  +R    + E +  DVP
Sbjct: 16  SLHAQAIRVDWGTNTGPIAPPPPRTTPQPPRKPYRDPAPVWEDQSDDVP 64


>AE014296-367|AAF47577.2|  354|Drosophila melanogaster CG12023-PA,
           isoform A protein.
          Length = 354

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = -2

Query: 600 SLGSQLQRLYTDFTAGVTAPPAPRTDNTPTRVRHRAGPGLHERRDGDVP 454
           SL +Q  R+      G  APP PRT   P R  +R    + E +  DVP
Sbjct: 16  SLHAQAIRVDWGTNTGPIAPPPPRTTPQPPRKPYRDPAPVWEDQSDDVP 64


>AF181653-1|AAD55438.1|  998|Drosophila melanogaster BcDNA.LD23634
           protein.
          Length = 998

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 19/73 (26%), Positives = 31/73 (42%)
 Frame = -2

Query: 531 RTDNTPTRVRHRAGPGLHERRDGDVPLRHGAERVRAHQRDRAQAQVLHRAGLPGRHCQRT 352
           R+D+  TR R          R+ +  LR   ++ R  +RDR + +   R  +  R     
Sbjct: 346 RSDSKETRRRRSKSRSKDRERERERELRELRDKERERERDRERERERERNEMRERERNEM 405

Query: 351 RGNEIETKADRXR 313
           R  E E + +R R
Sbjct: 406 RERERERERERER 418


>AE014298-768|AAF46056.1|  998|Drosophila melanogaster CG4119-PA
           protein.
          Length = 998

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 19/73 (26%), Positives = 31/73 (42%)
 Frame = -2

Query: 531 RTDNTPTRVRHRAGPGLHERRDGDVPLRHGAERVRAHQRDRAQAQVLHRAGLPGRHCQRT 352
           R+D+  TR R          R+ +  LR   ++ R  +RDR + +   R  +  R     
Sbjct: 346 RSDSKETRRRRSKSRSKDRERERERELRELRDKERERERDRERERERERNEMRERERNEM 405

Query: 351 RGNEIETKADRXR 313
           R  E E + +R R
Sbjct: 406 RERERERERERER 418


>BT012434-1|AAS93705.1|  400|Drosophila melanogaster RH66859p
           protein.
          Length = 400

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
 Frame = -2

Query: 510 RVRHRAGPGLHERRDGDV----PLRHGAERVRAHQRDRAQAQVLHRA 382
           R++ R   G H    G V    P + G  R+R HQRD    Q  HR+
Sbjct: 352 RLQIRGTSGEHSEAKGGVHDIQPTQDGTNRIRNHQRDARWNQGSHRS 398


>AY058638-1|AAL13867.1|  492|Drosophila melanogaster LD33732p
           protein.
          Length = 492

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 18/65 (27%), Positives = 29/65 (44%)
 Frame = -2

Query: 471 RDGDVPLRHGAERVRAHQRDRAQAQVLHRAGLPGRHCQRTRGNEIETKADRXRVHQ*APT 292
           R    P R   ER R   +DR +++  HR+    R  +R R  E +   +R R  +   +
Sbjct: 31  RSAATPPRKEPERHRERSKDRQRSKEKHRSRDRLRSRERQRSRERQRSRERQRSKERQRS 90

Query: 291 ARRER 277
             R+R
Sbjct: 91  KERQR 95


>AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p
           protein.
          Length = 1062

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 18/65 (27%), Positives = 29/65 (44%)
 Frame = -2

Query: 471 RDGDVPLRHGAERVRAHQRDRAQAQVLHRAGLPGRHCQRTRGNEIETKADRXRVHQ*APT 292
           R    P R   ER R   +DR +++  HR+    R  +R R  E +   +R R  +   +
Sbjct: 388 RSAATPPRKEPERHRERSKDRQRSKEKHRSRDRLRSRERQRSRERQRSRERQRSKERQRS 447

Query: 291 ARRER 277
             R+R
Sbjct: 448 KERQR 452


>AY052096-1|AAK93520.1|  574|Drosophila melanogaster SD04526p
           protein.
          Length = 574

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -2

Query: 519 TPTRVRHRAGPGLHERRDGDVPLR-HGAERVRAHQRDRAQAQVLHRAGLPGR 367
           +PT  + R+ P  H+RR    P R H   R R + RDR +     R+ LP R
Sbjct: 230 SPTEPKQRSSPPTHKRRSS--PSREHIRSRKRCYSRDRRE----RRSRLPSR 275


>AE014296-3703|AAN12199.1|  574|Drosophila melanogaster CG32452-PB,
           isoform B protein.
          Length = 574

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -2

Query: 519 TPTRVRHRAGPGLHERRDGDVPLR-HGAERVRAHQRDRAQAQVLHRAGLPGR 367
           +PT  + R+ P  H+RR    P R H   R R + RDR +     R+ LP R
Sbjct: 230 SPTEPKQRSSPPTHKRRSS--PSREHIRSRKRCYSRDRRE----RRSRLPSR 275


>AE014296-3702|AAN12198.1|  574|Drosophila melanogaster CG32452-PA,
           isoform A protein.
          Length = 574

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -2

Query: 519 TPTRVRHRAGPGLHERRDGDVPLR-HGAERVRAHQRDRAQAQVLHRAGLPGR 367
           +PT  + R+ P  H+RR    P R H   R R + RDR +     R+ LP R
Sbjct: 230 SPTEPKQRSSPPTHKRRSS--PSREHIRSRKRCYSRDRRE----RRSRLPSR 275


>AE014296-326|AAF47543.2| 1062|Drosophila melanogaster CG7971-PA,
           isoform A protein.
          Length = 1062

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 18/65 (27%), Positives = 29/65 (44%)
 Frame = -2

Query: 471 RDGDVPLRHGAERVRAHQRDRAQAQVLHRAGLPGRHCQRTRGNEIETKADRXRVHQ*APT 292
           R    P R   ER R   +DR +++  HR+    R  +R R  E +   +R R  +   +
Sbjct: 388 RSAATPPRKEPERHRERSKDRQRSKEKHRSRDRLRSRERQRSRERQRSRERQRSKERQRS 447

Query: 291 ARRER 277
             R+R
Sbjct: 448 KERQR 452


>AE014296-325|AAZ66051.1|  849|Drosophila melanogaster CG7971-PD,
           isoform D protein.
          Length = 849

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 18/65 (27%), Positives = 29/65 (44%)
 Frame = -2

Query: 471 RDGDVPLRHGAERVRAHQRDRAQAQVLHRAGLPGRHCQRTRGNEIETKADRXRVHQ*APT 292
           R    P R   ER R   +DR +++  HR+    R  +R R  E +   +R R  +   +
Sbjct: 388 RSAATPPRKEPERHRERSKDRQRSKEKHRSRDRLRSRERQRSRERQRSRERQRSKERQRS 447

Query: 291 ARRER 277
             R+R
Sbjct: 448 KERQR 452


>AE014296-324|AAF47542.2| 1107|Drosophila melanogaster CG7971-PC,
           isoform C protein.
          Length = 1107

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 18/65 (27%), Positives = 29/65 (44%)
 Frame = -2

Query: 471 RDGDVPLRHGAERVRAHQRDRAQAQVLHRAGLPGRHCQRTRGNEIETKADRXRVHQ*APT 292
           R    P R   ER R   +DR +++  HR+    R  +R R  E +   +R R  +   +
Sbjct: 388 RSAATPPRKEPERHRERSKDRQRSKEKHRSRDRLRSRERQRSRERQRSRERQRSKERQRS 447

Query: 291 ARRER 277
             R+R
Sbjct: 448 KERQR 452


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,825,745
Number of Sequences: 53049
Number of extensions: 449794
Number of successful extensions: 1624
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1624
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)