Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1197
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2751|AAN10956.2|  826|Drosophila melanogaster CG31782-P...    34   0.21 
AE014134-2750|AAN10955.1|  656|Drosophila melanogaster CG31782-P...    34   0.21 
BT025200-1|ABF17891.1|  522|Drosophila melanogaster FI01120p pro...    30   3.5  
AY069782-1|AAL39927.1|  522|Drosophila melanogaster SD02478p pro...    30   3.5  
AE014296-3606|AAF51768.1|  522|Drosophila melanogaster CG11247-P...    30   3.5  
AE014296-3605|AAF51769.1|  522|Drosophila melanogaster CG11247-P...    30   3.5  

>AE014134-2751|AAN10956.2|  826|Drosophila melanogaster CG31782-PB,
           isoform B protein.
          Length = 826

 Score = 33.9 bits (74), Expect = 0.21
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +2

Query: 287 CYTSSRK*ITHNRTFFVILNNFTSHKNLH*SRKHRSCQ*CSQT-SRHSDIKL 439
           C  S R+  +H    F   +N + HK LH  +K   C+ CS+T  R SD+K+
Sbjct: 197 CSKSYRQIGSHCDKSFKYPSNLSRHKRLHNGKKPMECEFCSKTFPRASDLKV 248


>AE014134-2750|AAN10955.1|  656|Drosophila melanogaster CG31782-PA,
           isoform A protein.
          Length = 656

 Score = 33.9 bits (74), Expect = 0.21
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +2

Query: 287 CYTSSRK*ITHNRTFFVILNNFTSHKNLH*SRKHRSCQ*CSQT-SRHSDIKL 439
           C  S R+  +H    F   +N + HK LH  +K   C+ CS+T  R SD+K+
Sbjct: 197 CSKSYRQIGSHCDKSFKYPSNLSRHKRLHNGKKPMECEFCSKTFPRASDLKV 248


>BT025200-1|ABF17891.1|  522|Drosophila melanogaster FI01120p
           protein.
          Length = 522

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 326 TFFVILNNFTSHKNLH*SRKHRSCQ*CSQTSRHSDI-KL*VKKY 454
           T+F   + +  H  +H   +   C+ C QT  HS + KL ++K+
Sbjct: 300 TYFTQKSQYNVHMRMHTGERPYQCRICHQTFAHSSVLKLHIRKH 343


>AY069782-1|AAL39927.1|  522|Drosophila melanogaster SD02478p
           protein.
          Length = 522

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 326 TFFVILNNFTSHKNLH*SRKHRSCQ*CSQTSRHSDI-KL*VKKY 454
           T+F   + +  H  +H   +   C+ C QT  HS + KL ++K+
Sbjct: 300 TYFTQKSQYNVHMRMHTGERPYQCRICHQTFAHSSVLKLHIRKH 343


>AE014296-3606|AAF51768.1|  522|Drosophila melanogaster CG11247-PB,
           isoform B protein.
          Length = 522

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 326 TFFVILNNFTSHKNLH*SRKHRSCQ*CSQTSRHSDI-KL*VKKY 454
           T+F   + +  H  +H   +   C+ C QT  HS + KL ++K+
Sbjct: 300 TYFTQKSQYNVHMRMHTGERPYQCRICHQTFAHSSVLKLHIRKH 343


>AE014296-3605|AAF51769.1|  522|Drosophila melanogaster CG11247-PA,
           isoform A protein.
          Length = 522

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 326 TFFVILNNFTSHKNLH*SRKHRSCQ*CSQTSRHSDI-KL*VKKY 454
           T+F   + +  H  +H   +   C+ C QT  HS + KL ++K+
Sbjct: 300 TYFTQKSQYNVHMRMHTGERPYQCRICHQTFAHSSVLKLHIRKH 343


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,619,021
Number of Sequences: 53049
Number of extensions: 531539
Number of successful extensions: 940
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)