Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1193
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039044-11|AAG24131.1|  333|Caenorhabditis elegans Serpentine r...    30   2.0  
Z92782-5|CAB07190.1|  385|Caenorhabditis elegans Hypothetical pr...    29   2.7  

>AF039044-11|AAG24131.1|  333|Caenorhabditis elegans Serpentine
           receptor, class j protein37 protein.
          Length = 333

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = +3

Query: 222 LSSXFKYLLTNLTN-KLVNDLFHSKSLIFQEIICLYFXV----CFFL 347
           L S F Y    L N +L ND FH+   I   I C+YF V    CF+L
Sbjct: 107 LLSHFIYRYLALHNSELTNDKFHTYMTISFGIFCVYFVVWHASCFYL 153


>Z92782-5|CAB07190.1|  385|Caenorhabditis elegans Hypothetical
           protein F14F8.6 protein.
          Length = 385

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = -1

Query: 426 PSHFEFYIVYIFNSEETI 373
           PS+ E YI+Y+F+S ET+
Sbjct: 116 PSYLEMYIIYVFHSLETV 133


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,773,105
Number of Sequences: 27780
Number of extensions: 211174
Number of successful extensions: 375
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 375
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)