Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1192
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    25   1.9  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    25   1.9  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    25   3.3  

>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +1

Query: 199 MTESHLNANAELCAN*KCFTTEVFLKYCEWYRVFDVSSIKS-YTFNLNLTYSYEL 360
           +T+  L   + LC     F   V LK C W+   D  S K+ Y  NL ++ SY+L
Sbjct: 407 LTDDGLIMKSFLCPESTLFDQTV-LK-CNWWFYVDCKSSKNLYDSNLPVSKSYQL 459


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +1

Query: 199 MTESHLNANAELCAN*KCFTTEVFLKYCEWYRVFDVSSIKS-YTFNLNLTYSYEL 360
           +T+  L   + LC     F   V LK C W+   D  S K+ Y  NL ++ SY+L
Sbjct: 415 LTDDGLIMKSFLCPESTLFDQTV-LK-CNWWFYVDCKSSKNLYDSNLPVSKSYQL 467


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 136 SKYDYVFNQLSIIFHLLTFFIC 71
           SK+  V N+LS + + + F IC
Sbjct: 380 SKFGLVLNRLSFVVYCVIFIIC 401


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,257
Number of Sequences: 2352
Number of extensions: 14448
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)